RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 PTBP3O95758 552 aaKnown RBP4.85□□□□□ -1.63
USP3-212ENST00000559276 KNG1P01042 644 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 RNASE1P07998 156 aaKnown RBP4.85□□□□□ -1.63
USP3-212ENST00000559276 WNT2P09544 360 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 IGHV4-38-2P0DP08 117 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 SLC25A6P12236 298 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 KITLGP21583 273 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 MSR1P21757 451 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 UCP1P25874 307 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 GCH1P30793 250 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 CEACAM6P40199 344 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 GLIPR1P48060 266 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 RBP2P50120 134 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 RND2P52198 227 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 PIGPP57054 158 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 UBE2KP61086 200 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 PKIAP61925 76 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 HIST1H3AP68431 136 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 TNFAIP6P98066 277 aaPredicted RBP4.85□□□□□ -1.63
USP3-212ENST00000559276 HNF4GQ14541 408 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 UBE2V2Q15819 145 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 RSPO1Q2MKA7 263 aaPredicted RBP4.85□□□□□ -1.63
USP3-212ENST00000559276 Q3ZCU0 254 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 TMEM155Q4W5P6 130 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 SHISA2Q6UWI4 295 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 FBXW12Q6X9E4 464 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 LHFPL2Q6ZUX7 228 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 C9orf139Q6ZV77 190 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 C1orf87Q8N0U7 546 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 OR2C3Q8N628 320 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 TEX29Q8N6K0 151 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 BHLHE23Q8NDY6 225 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 OR4D5Q8NGN0 318 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 ITLN1Q8WWA0 313 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 SPTSSAQ969W0 71 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 ERGIC1Q969X5 290 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 PGAM5Q96HS1 289 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 RCC1LQ96I51 464 aaKnown RBP4.85□□□□□ -1.63
USP3-212ENST00000559276 BTF3L4Q96K17 158 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 P2RX4Q99571 388 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 NKX3-1Q99801 234 aaPredicted RBP4.85□□□□□ -1.63
USP3-212ENST00000559276 METTL9Q9H1A3 318 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 BANF2Q9H503 90 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 C11orf1Q9H5F2 150 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 ZNF286AQ9HBT8 521 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 GCM1Q9NP62 436 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 TMEM106BQ9NUM4 274 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 PLEKHJ1Q9NW61 149 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 PLEK2Q9NYT0 353 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 PLA2G2EQ9NZK7 142 aa4.85□□□□□ -1.63
USP3-212ENST00000559276 TRBV24-1A0A075B6N3 115 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 IGHV3OR16-10A0A075B7F0 116 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 A0A1B0GWJ7 208 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 A0A1W2PPE3 182 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 OR6C6A6NF89 314 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 H0YL77 283 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 H3BQ15 152 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 TMEM178BH3BS89 294 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 CLDN34H7C241 214 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 J3KRW8 73 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 MLNRO43193 412 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 OPN1MWP04001 364 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 RPLP1P05386 114 aaKnown RBP4.84□□□□□ -1.63
USP3-212ENST00000559276 SRP19P09132 144 aaKnown RBP4.84□□□□□ -1.63
USP3-212ENST00000559276 DBHP09172 617 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 OPN1MW2P0DN77 364 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 OPN1MW3P0DN78 364 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 COX5BP10606 129 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 PI3P19957 117 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 ANOS1P23352 680 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 S100GP29377 79 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 RPS10P46783 165 aaKnown RBP4.84□□□□□ -1.63
USP3-212ENST00000559276 OR2B8PP59922 312 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 HERV-K104P61576 105 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 HOXA4Q00056 320 aaPredicted RBP4.84□□□□□ -1.63
USP3-212ENST00000559276 EWSR1Q01844 656 aaKnown RBP eCLIP4.84□□□□□ -1.63
USP3-212ENST00000559276 FOXL1Q12952 345 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 ELOBQ15370 118 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 TAF9Q16594 264 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 PDLIM3Q53GG5 364 aaPredicted RBP4.84□□□□□ -1.63
USP3-212ENST00000559276 PYY3Q5JQD4 70 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 FAM57BQ71RH2 274 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 REC114Q7Z4M0 266 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 MRPL52Q86TS9 123 aaKnown RBP4.84□□□□□ -1.63
USP3-212ENST00000559276 C1orf174Q8IYL3 243 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 H1FOOQ8IZA3 346 aaPredicted RBP4.84□□□□□ -1.63
USP3-212ENST00000559276 OR2Z1Q8NG97 314 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 FAM213BQ8TBF2 198 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 RNASEH2CQ8TDP1 164 aaKnown RBP4.84□□□□□ -1.63
USP3-212ENST00000559276 RAB24Q969Q5 203 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 ISOC2Q96AB3 205 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 FAM71F1Q96KD3 344 aaPredicted RBP4.84□□□□□ -1.63
USP3-212ENST00000559276 RHOVQ96L33 236 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 TMEM56Q96MV1 263 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 NOL4LQ96MY1 436 aaPredicted RBP4.84□□□□□ -1.63
USP3-212ENST00000559276 DIRC2Q96SL1 478 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 PARD6GQ9BYG4 376 aaPredicted RBP4.84□□□□□ -1.63
USP3-212ENST00000559276 PRDM13Q9H4Q3 707 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 SLC2A9Q9NRM0 540 aa4.84□□□□□ -1.63
USP3-212ENST00000559276 LYRM2Q9NU23 88 aaPredicted RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms