RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 ZBTB25P24278 435 aa5.67□□□□□ -1.5
SPG11-213ENST00000558988 RAB9AP51151 201 aa5.67□□□□□ -1.5
SPG11-213ENST00000558988 LINC00205P59089 165 aa5.67□□□□□ -1.5
SPG11-213ENST00000558988 TPPP2P59282 170 aa5.67□□□□□ -1.5
SPG11-213ENST00000558988 RPS16P62249 146 aaKnown RBP5.67□□□□□ -1.5
SPG11-213ENST00000558988 CX3CL1P78423 397 aa5.67□□□□□ -1.5
SPG11-213ENST00000558988 MRPS15P82914 257 aaKnown RBP5.67□□□□□ -1.5
SPG11-213ENST00000558988 QRFPP83859 136 aa5.67□□□□□ -1.5
SPG11-213ENST00000558988 FABP5Q01469 135 aa5.67□□□□□ -1.5
SPG11-213ENST00000558988 DEFA5Q01523 94 aa5.67□□□□□ -1.5
SPG11-213ENST00000558988 PLA2G7Q13093 441 aa5.67□□□□□ -1.5
SPG11-213ENST00000558988 DCTN2Q13561 401 aaKnown RBP5.67□□□□□ -1.5
SPG11-213ENST00000558988 ACTBL2Q562R1 376 aa5.67□□□□□ -1.5
SPG11-213ENST00000558988 ASPHD1Q5U4P2 390 aa5.67□□□□□ -1.5
SPG11-213ENST00000558988 TMEM91Q6ZNR0 172 aa5.67□□□□□ -1.5
SPG11-213ENST00000558988 ZNF554Q86TJ5 538 aa5.67□□□□□ -1.5
SPG11-213ENST00000558988 PPP1R27Q86WC6 154 aa5.67□□□□□ -1.5
SPG11-213ENST00000558988 ZNF491Q8N8L2 437 aa5.67□□□□□ -1.5
SPG11-213ENST00000558988 NRG4Q8WWG1 115 aa5.67□□□□□ -1.5
SPG11-213ENST00000558988 DCUN1D4Q92564 292 aa5.67□□□□□ -1.5
SPG11-213ENST00000558988 ARPC1AQ92747 370 aa5.67□□□□□ -1.5
SPG11-213ENST00000558988 ARHGAP5-AS1Q96IT6 56 aa5.67□□□□□ -1.5
SPG11-213ENST00000558988 UBE2E2Q96LR5 201 aa5.67□□□□□ -1.5
SPG11-213ENST00000558988 CNBD2Q96M20 576 aa5.67□□□□□ -1.5
SPG11-213ENST00000558988 GFI1Q99684 422 aa5.67□□□□□ -1.5
SPG11-213ENST00000558988 TM2D1Q9BX74 207 aa5.67□□□□□ -1.5
SPG11-213ENST00000558988 SCOCQ9UIL1 159 aa5.67□□□□□ -1.5
SPG11-213ENST00000558988 FOXA2Q9Y261 457 aaPredicted RBP5.67□□□□□ -1.5
SPG11-213ENST00000558988 ZNF256Q9Y2P7 627 aaPredicted RBP5.67□□□□□ -1.5
SPG11-213ENST00000558988 WASHC3Q9Y3C0 194 aa5.67□□□□□ -1.5
SPG11-213ENST00000558988 RBM7Q9Y580 266 aaKnown RBP5.67□□□□□ -1.5
SPG11-213ENST00000558988 IGHV4OR15-8A0A075B7B6 117 aa5.66□□□□□ -1.5
SPG11-213ENST00000558988 A0A087WW49 117 aa5.66□□□□□ -1.5
SPG11-213ENST00000558988 A0A0B4J203 849 aa5.66□□□□□ -1.5
SPG11-213ENST00000558988 OR5H14A6NHG9 310 aa5.66□□□□□ -1.5
SPG11-213ENST00000558988 J3QRK9 145 aa5.66□□□□□ -1.5
SPG11-213ENST00000558988 SLC17A2O00624 439 aa5.66□□□□□ -1.5
SPG11-213ENST00000558988 DENRO43583 198 aaKnown RBP5.66□□□□□ -1.5
SPG11-213ENST00000558988 SLC25A17O43808 307 aa5.66□□□□□ -1.5
SPG11-213ENST00000558988 ARL6IP5O75915 188 aa5.66□□□□□ -1.5
SPG11-213ENST00000558988 NDUFA3O95167 84 aa5.66□□□□□ -1.5
SPG11-213ENST00000558988 CNIH1O95406 144 aa5.66□□□□□ -1.5
SPG11-213ENST00000558988 CA2P00918 260 aa5.66□□□□□ -1.5
SPG11-213ENST00000558988 APOA2P02652 100 aa5.66□□□□□ -1.5
SPG11-213ENST00000558988 TRGV3P03979 118 aa5.66□□□□□ -1.5
SPG11-213ENST00000558988 APELAP0DMC3 54 aa5.66□□□□□ -1.5
SPG11-213ENST00000558988 PPIFP30405 207 aaKnown RBP5.66□□□□□ -1.5
SPG11-213ENST00000558988 OR10A3P58181 314 aa5.66□□□□□ -1.5
SPG11-213ENST00000558988 FHL3Q13643 280 aa5.66□□□□□ -1.5
SPG11-213ENST00000558988 IRF3Q14653 427 aa5.66□□□□□ -1.5
SPG11-213ENST00000558988 PSG5Q15238 335 aa5.66□□□□□ -1.5
SPG11-213ENST00000558988 RNF152Q8N8N0 203 aa5.66□□□□□ -1.5
SPG11-213ENST00000558988 LFNGQ8NES3 379 aa5.66□□□□□ -1.5
SPG11-213ENST00000558988 NPBQ8NG41 125 aa5.66□□□□□ -1.5
SPG11-213ENST00000558988 DLX4Q92988 240 aaPredicted RBP5.66□□□□□ -1.5
SPG11-213ENST00000558988 FAM3DQ96BQ1 224 aa5.66□□□□□ -1.5
SPG11-213ENST00000558988 PECRQ9BY49 303 aa5.66□□□□□ -1.5
SPG11-213ENST00000558988 RIMS4Q9H426 269 aaPredicted RBP5.66□□□□□ -1.5
SPG11-213ENST00000558988 Q9N2K0 584 aa5.66□□□□□ -1.5
SPG11-213ENST00000558988 SLC35D1Q9NTN3 355 aa5.66□□□□□ -1.5
SPG11-213ENST00000558988 RDH8Q9NYR8 311 aa5.66□□□□□ -1.5
SPG11-213ENST00000558988 U3KQK5 164 aa5.66□□□□□ -1.5
SPG11-213ENST00000558988 IGKV1-6A0A0C4DH72 117 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 TMEM272A0A1B0GTI8 110 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 ERICH4A6NGS2 130 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 TRDCB7Z8K6 153 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 LINC01619G3V211 115 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 I3L521 148 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 IGKV1-16P04430 117 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 TFAP2AP05549 437 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 LGALS1P09382 135 aaKnown RBP5.65□□□□□ -1.5
SPG11-213ENST00000558988 OR8U9P0C7N5 309 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 SPNP16150 400 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 GNB3P16520 340 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 MYL9P24844 172 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 CD40LGP29965 261 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 MC5RP33032 325 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 RAP2BP61225 183 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 PITPNAQ00169 270 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 NHLH2Q02577 135 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 TMEM267Q0VDI3 215 aaPredicted RBP5.65□□□□□ -1.5
SPG11-213ENST00000558988 MLLT11Q13015 90 aaPredicted RBP5.65□□□□□ -1.5
SPG11-213ENST00000558988 ARFRP1Q13795 201 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 KIAA0141Q14154 515 aaPredicted RBP5.65□□□□□ -1.5
SPG11-213ENST00000558988 FXYD3Q14802 87 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 C2orf76Q3KRA6 126 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 MOGAT2Q3SYC2 334 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 C19orf54Q5BKX5 351 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 IGSF11Q5DX21 431 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 PLAC9Q5JTB6 97 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 RNLSQ5VYX0 342 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 ZNF660Q6AZW8 331 aaPredicted RBP5.65□□□□□ -1.5
SPG11-213ENST00000558988 FAM71F2Q6NXP2 309 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 MZT2AQ6P582 158 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 ZNF880Q6PDB4 577 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 IZUMO2Q6UXV1 221 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 ZNF383Q8NA42 475 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 MINDY2Q8NBR6 621 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 OR5T1Q8NG75 326 aa5.65□□□□□ -1.5
SPG11-213ENST00000558988 OR56B1Q8NGI3 324 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms