RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 NSUN5P1Q3KNT7 163 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 RPL39P5Q59GN2 51 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 IGSF11Q5DX21 431 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 C9orf152Q5JTZ5 239 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 MINOS1Q5TGZ0 78 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 ZNF880Q6PDB4 577 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 ZNF773Q6PK81 442 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 GDPGP1Q6ZNW5 385 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 CDH26Q8IXH8 852 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 KLHDC1Q8N7A1 406 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 DRAXINQ8NBI3 349 aaPredicted RBP3.32□□□□□ -1.88
SPG11-211ENST00000558561 OR4F5Q8NH21 305 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 ZNF596Q8TC21 504 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 HAVCR2Q8TDQ0 301 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 CASTOR1Q8WTX7 329 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 PHYHIPQ92561 330 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 YIPF6Q96EC8 236 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 RBM14Q96PK6 669 aaKnown RBP3.32□□□□□ -1.88
SPG11-211ENST00000558561 DUX3Q96PT4 197 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 CITED2Q99967 270 aaPredicted RBP3.32□□□□□ -1.88
SPG11-211ENST00000558561 HSPB9Q9BQS6 159 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 ZNF251Q9BRH9 671 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 UQCC2Q9BRT2 126 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 CSTL1Q9H114 145 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 NCOR1P1Q9H4R4 102 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 RHOFQ9HBH0 211 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 PLGRKTQ9HBL7 147 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 OR2S2Q9NQN1 319 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 PLEKHJ1Q9NW61 149 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 NDUFB11Q9NX14 153 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 CKLFQ9UBR5 152 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 MINOS1-NBL1R4GNA1 71 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 DNAH3Q8TD57 4116 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 NOTCH1P46531 2555 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 TRAV1-2A0A0B4J238 106 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 LOC100506127A0A0U1RQW1 187 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 A0A1B0GUV1 79 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 hCG_1809904A0A1W2PP81 198 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 A0A1W2PPE2 198 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 A0A1W2PR64 198 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 A0A1W2PRV1 198 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 FUOMA2VDF0 154 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 IFITM5A6NNB3 132 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 PRAC2D3DTV9 90 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 G3V318 75 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 G3V4G9 280 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 CCRL2O00421 344 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 SSX5O60225 188 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 ZNF780AO75290 641 aaPredicted RBP3.31□□□□□ -1.88
SPG11-211ENST00000558561 RBP4P02753 201 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 SMIM18P0DKX4 95 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 CT45A6P0DMU7 189 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 CT45A5P0DMU8 189 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 CT45A7P0DMV0 189 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 MYOD1P15172 320 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 RAB3BP20337 219 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 CEACAM6P40199 344 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 DYNLT3P51808 116 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 GABARAPL2P60520 117 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 ERVFC1-1P60608 527 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 PAX5Q02548 391 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 RELQ04864 619 aaPredicted RBP3.31□□□□□ -1.88
SPG11-211ENST00000558561 SCGB2A2Q13296 93 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 EBI3Q14213 229 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 GPR176Q14439 515 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 HES1Q14469 280 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 HMGN3Q15651 99 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 PNLIPRP3Q17RR3 467 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 CDNFQ49AH0 187 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 OR52W1Q6IF63 320 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 FAM122CQ6P4D5 195 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 C11orf88Q6PI97 169 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 SLC25A48Q6ZT89 311 aaKnown RBP3.31□□□□□ -1.88
SPG11-211ENST00000558561 Q8N2B8 174 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 LINC00311Q8N616 119 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 Q8N6K4 173 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 GVQW1Q8N7I0 195 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 Q8N9W7 124 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 OR5AU1Q8NGC0 362 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 OR6M1Q8NGM8 313 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 OR5R1Q8NH85 324 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 KCNG3Q8TAE7 436 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 RTN4IP1Q8WWV3 396 aaPredicted RBP3.31□□□□□ -1.88
SPG11-211ENST00000558561 IL1F10Q8WWZ1 152 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 MRPS24Q96EL2 167 aaKnown RBP3.31□□□□□ -1.88
SPG11-211ENST00000558561 NEDD4LQ96PU5 975 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 MYCBPQ99417 103 aaPredicted RBP3.31□□□□□ -1.88
SPG11-211ENST00000558561 NABP2Q9BQ15 211 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 AGMATQ9BSE5 352 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 TMEM59Q9BXS4 323 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 MRPL20Q9BYC9 149 aaKnown RBP3.31□□□□□ -1.88
SPG11-211ENST00000558561 YTHDF1Q9BYJ9 559 aaKnown RBP3.31□□□□□ -1.88
SPG11-211ENST00000558561 ATG5Q9H1Y0 275 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 VCX3BQ9H321 246 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 GAL3ST2Q9H3Q3 398 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 Q9N2K0 584 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 ABCB10Q9NRK6 738 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 DAPK2Q9UIK4 370 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 RAB22AQ9UL26 194 aa3.31□□□□□ -1.88
SPG11-211ENST00000558561 GAB2Q9UQC2 676 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms