RNA–Protein interactions for RNA: ENST00000558528.1

LDLR-209, Transcript of low density lipoprotein receptor, humanhuman

TSL 2

Gene LDLR, Length 456 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-209ENST00000558528 SIGLEC5O15389 551 aa4.2□□□□□ -1.74
LDLR-209ENST00000558528 CREBL2O60519 120 aaPredicted RBP4.2□□□□□ -1.74
LDLR-209ENST00000558528 PGAM2P15259 253 aa4.2□□□□□ -1.74
LDLR-209ENST00000558528 SSTR2P30874 369 aa4.2□□□□□ -1.74
LDLR-209ENST00000558528 IL2RGP31785 369 aa4.2□□□□□ -1.74
LDLR-209ENST00000558528 CHRNA7P36544 502 aa4.2□□□□□ -1.74
LDLR-209ENST00000558528 PPT1P50897 306 aa4.2□□□□□ -1.74
LDLR-209ENST00000558528 BCAP31P51572 246 aa4.2□□□□□ -1.74
LDLR-209ENST00000558528 EFNA4P52798 201 aa4.2□□□□□ -1.74
LDLR-209ENST00000558528 DSCR9P59020 149 aa4.2□□□□□ -1.74
LDLR-209ENST00000558528 KRTAP10-9P60411 292 aa4.2□□□□□ -1.74
LDLR-209ENST00000558528 HLA-DRB3P79483 266 aa4.2□□□□□ -1.74
LDLR-209ENST00000558528 OPCMLQ14982 345 aa4.2□□□□□ -1.74
LDLR-209ENST00000558528 CDSNQ15517 529 aa4.2□□□□□ -1.74
LDLR-209ENST00000558528 MSMO1Q15800 293 aa4.2□□□□□ -1.74
LDLR-209ENST00000558528 Q3ZCU0 254 aa4.2□□□□□ -1.74
LDLR-209ENST00000558528 ABCA11PQ4W5N1 156 aa4.2□□□□□ -1.74
LDLR-209ENST00000558528 TMEM128Q5BJH2 165 aa4.2□□□□□ -1.74
LDLR-209ENST00000558528 TMEM255AQ5JRV8 349 aa4.2□□□□□ -1.74
LDLR-209ENST00000558528 LY6G6FQ5SQ64 297 aa4.2□□□□□ -1.74
LDLR-209ENST00000558528 STUMQ69YW2 141 aa4.2□□□□□ -1.74
LDLR-209ENST00000558528 OR52W1Q6IF63 320 aa4.2□□□□□ -1.74
LDLR-209ENST00000558528 ZNF788Q6ZQV5 615 aa4.2□□□□□ -1.74
LDLR-209ENST00000558528 Q6ZSV7 163 aa4.2□□□□□ -1.74
LDLR-209ENST00000558528 TGIF2LYQ8IUE0 185 aa4.2□□□□□ -1.74
LDLR-209ENST00000558528 SGPP2Q8IWX5 399 aa4.2□□□□□ -1.74
LDLR-209ENST00000558528 SLC38A6Q8IZM9 456 aa4.2□□□□□ -1.74
LDLR-209ENST00000558528 CD177Q8N6Q3 437 aa4.2□□□□□ -1.74
LDLR-209ENST00000558528 OR4S1Q8NGB4 309 aa4.2□□□□□ -1.74
LDLR-209ENST00000558528 MRPL30Q8TCC3 161 aaKnown RBP4.2□□□□□ -1.74
LDLR-209ENST00000558528 IGFBPL1Q8WX77 278 aa4.2□□□□□ -1.74
LDLR-209ENST00000558528 ZNF2Q9BSG1 426 aaPredicted RBP4.2□□□□□ -1.74
LDLR-209ENST00000558528 TOLLIPQ9H0E2 274 aa4.2□□□□□ -1.74
LDLR-209ENST00000558528 WDR13Q9H1Z4 485 aa4.2□□□□□ -1.74
LDLR-209ENST00000558528 MED28Q9H204 178 aa4.2□□□□□ -1.74
LDLR-209ENST00000558528 MMP28Q9H239 520 aa4.2□□□□□ -1.74
LDLR-209ENST00000558528 UBTD1Q9HAC8 227 aa4.2□□□□□ -1.74
LDLR-209ENST00000558528 NUDT15Q9NV35 164 aa4.2□□□□□ -1.74
LDLR-209ENST00000558528 RBM7Q9Y580 266 aaKnown RBP4.2□□□□□ -1.74
LDLR-209ENST00000558528 DNAJC13O75165 2243 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 ABCA4P78363 2273 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 PRRC2AP48634 2157 aaKnown RBP4.19□□□□□ -1.74
LDLR-209ENST00000558528 IGKV1D-17A0A075B6S4 117 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 TRAV6A0A075B6T7 132 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 TRBV6-7A0A0A0MS04 114 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 A0A0B4J2A0 478 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 IGHV3-64DA0A0J9YX35 117 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 ODAMA1E959 279 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 C7orf66A4D0T2 115 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 ZNF729A6NN14 1252 aaPredicted RBP4.19□□□□□ -1.74
LDLR-209ENST00000558528 RNF212BA8MTL3 300 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 E5RGE8 158 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 NDUFS8O00217 210 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 ITGB1BP1O14713 200 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 YPEL1O60688 119 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 ZNF737O75373 536 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 ATG12O94817 140 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 CYB5R3P00387 301 aaPredicted RBP4.19□□□□□ -1.74
LDLR-209ENST00000558528 CTSDP07339 412 aaPredicted RBP4.19□□□□□ -1.74
LDLR-209ENST00000558528 GSTT2P0CG29 244 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 ZNF728P0DKX0 622 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 IGHV4-30-4P0DP06 118 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 DAOP14920 347 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 FCGR2CP31995 323 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 BTCP35070 178 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 GPR6P46095 362 aaPredicted RBP4.19□□□□□ -1.74
LDLR-209ENST00000558528 AMTP48728 403 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 RAB7AP51149 207 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 CCR6P51684 374 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 EDDM3BP56851 147 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 SRPXP78539 464 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 CYCSP99999 105 aaKnown RBP4.19□□□□□ -1.74
LDLR-209ENST00000558528 DHODHQ02127 395 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 HMGN3Q15651 99 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 C11orf71Q6IPW1 123 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 C17orf107Q6ZR85 190 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 SLC25A42Q86VD7 318 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 LHFPL1Q86WI0 220 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 TCTEX1D1Q8N7M0 179 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 DEFB108BQ8NET1 73 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 OR5T2Q8NGG2 359 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 OR8B3Q8NGG8 313 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 COQ8AQ8NI60 647 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 NEUROG1Q92886 237 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 ARL11Q969Q4 196 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 YPEL2Q96QA6 119 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 OR8B2Q96RD0 313 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 RAB40CQ96S21 281 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 PHB2Q99623 299 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 SLC6A7Q99884 636 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 CABLES2Q9BTV7 478 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 SHARPINQ9H0F6 387 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 KLK15Q9H2R5 256 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 OR51J1Q9H342 316 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 GAL3ST2Q9H3Q3 398 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 C5orf66Q9H5L9 145 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 TAF9BQ9HBM6 251 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 RDH8Q9NYR8 311 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 SHPKQ9UHJ6 478 aa4.19□□□□□ -1.74
LDLR-209ENST00000558528 ZNF230Q9UIE0 474 aaPredicted RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms