RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 TRAPPC2LH3BP13 241 aa9.43□□□□□ -0.9
PCAT29-201ENST00000558411 J3QR06 171 aa9.43□□□□□ -0.9
PCAT29-201ENST00000558411 K7EN84 100 aa9.43□□□□□ -0.9
PCAT29-201ENST00000558411 K7ERU9 68 aa9.43□□□□□ -0.9
PCAT29-201ENST00000558411 SLC17A3O00476 420 aa9.43□□□□□ -0.9
PCAT29-201ENST00000558411 MPDU1O75352 247 aa9.43□□□□□ -0.9
PCAT29-201ENST00000558411 TOX4O94842 621 aa9.43□□□□□ -0.9
PCAT29-201ENST00000558411 CXorf1O96002 111 aa9.43□□□□□ -0.9
PCAT29-201ENST00000558411 ZNF32P17041 273 aa9.43□□□□□ -0.9
PCAT29-201ENST00000558411 PSG7Q13046 419 aa9.43□□□□□ -0.9
PCAT29-201ENST00000558411 C20orf204Q6ZNR8 217 aa9.43□□□□□ -0.9
PCAT29-201ENST00000558411 MOB1BQ7L9L4 216 aa9.43□□□□□ -0.9
PCAT29-201ENST00000558411 VASH2Q86V25 355 aa9.43□□□□□ -0.9
PCAT29-201ENST00000558411 BATF2Q8N1L9 274 aa9.43□□□□□ -0.9
PCAT29-201ENST00000558411 ZNF837Q96EG3 531 aaPredicted RBP9.43□□□□□ -0.9
PCAT29-201ENST00000558411 IL23AQ9NPF7 189 aa9.43□□□□□ -0.9
PCAT29-201ENST00000558411 CD207Q9UJ71 328 aa9.43□□□□□ -0.9
PCAT29-201ENST00000558411 PPP1R3CQ9UQK1 317 aa9.43□□□□□ -0.9
PCAT29-201ENST00000558411 V9GYV3 84 aa9.43□□□□□ -0.9
PCAT29-201ENST00000558411 TNRC6BQ9UPQ9 1833 aaKnown RBP9.42□□□□□ -0.9
PCAT29-201ENST00000558411 ZNF891A8MT65 544 aaPredicted RBP9.42□□□□□ -0.9
PCAT29-201ENST00000558411 H0YJW9 148 aa9.42□□□□□ -0.9
PCAT29-201ENST00000558411 HSPB6O14558 160 aa9.42□□□□□ -0.9
PCAT29-201ENST00000558411 HLA-DQA1P01909 254 aa9.42□□□□□ -0.9
PCAT29-201ENST00000558411 STAG3L2P0CL84 134 aa9.42□□□□□ -0.9
PCAT29-201ENST00000558411 STAG3L3P0CL85 134 aa9.42□□□□□ -0.9
PCAT29-201ENST00000558411 PCBD1P61457 104 aa9.42□□□□□ -0.9
PCAT29-201ENST00000558411 ZNF718Q3SXZ3 478 aa9.42□□□□□ -0.9
PCAT29-201ENST00000558411 TMPRSS7Q7RTY8 843 aa9.42□□□□□ -0.9
PCAT29-201ENST00000558411 C17orf82Q86X59 251 aaPredicted RBP9.42□□□□□ -0.9
PCAT29-201ENST00000558411 CPT1CQ8TCG5 803 aa9.42□□□□□ -0.9
PCAT29-201ENST00000558411 LMX1AQ8TE12 382 aa9.42□□□□□ -0.9
PCAT29-201ENST00000558411 TSKUQ8WUA8 353 aa9.42□□□□□ -0.9
PCAT29-201ENST00000558411 NUDT11Q96G61 164 aa9.42□□□□□ -0.9
PCAT29-201ENST00000558411 RCHY1Q96PM5 261 aa9.42□□□□□ -0.9
PCAT29-201ENST00000558411 PRDM14Q9GZV8 571 aa9.42□□□□□ -0.9
PCAT29-201ENST00000558411 WNT16Q9UBV4 365 aa9.42□□□□□ -0.9
PCAT29-201ENST00000558411 ARHGAP21Q5T5U3 1957 aa9.42□□□□□ -0.9
PCAT29-201ENST00000558411 C5orf42Q9H799 3197 aa9.42□□□□□ -0.9
PCAT29-201ENST00000558411 ZNF16P17020 682 aaPredicted RBP9.41□□□□□ -0.9
PCAT29-201ENST00000558411 SELENOVP59797 346 aa9.41□□□□□ -0.9
PCAT29-201ENST00000558411 SCCPDHQ8NBX0 429 aa9.41□□□□□ -0.9
PCAT29-201ENST00000558411 BADQ92934 168 aa9.41□□□□□ -0.9
PCAT29-201ENST00000558411 EAF1Q96JC9 268 aaPredicted RBP9.41□□□□□ -0.9
PCAT29-201ENST00000558411 SF3B5Q9BWJ5 86 aaKnown RBP9.41□□□□□ -0.9
PCAT29-201ENST00000558411 C1QTNF5Q9BXJ0 243 aa9.41□□□□□ -0.9
PCAT29-201ENST00000558411 OR2H1Q9GZK4 316 aa9.41□□□□□ -0.9
PCAT29-201ENST00000558411 HES4Q9HCC6 221 aa9.41□□□□□ -0.9
PCAT29-201ENST00000558411 MTCH1Q9NZJ7 389 aa9.41□□□□□ -0.9
PCAT29-201ENST00000558411 OR1A1Q9P1Q5 309 aa9.41□□□□□ -0.9
PCAT29-201ENST00000558411 FER1L5A0AVI2 2057 aa9.41□□□□□ -0.9
PCAT29-201ENST00000558411 PCDH15Q96QU1 1955 aa9.41□□□□□ -0.9
PCAT29-201ENST00000558411 TRAV38-1A0A0B4J264 116 aa9.41□□□□□ -0.9
PCAT29-201ENST00000558411 OPRK1P41145 380 aa9.41□□□□□ -0.9
PCAT29-201ENST00000558411 TBR1Q16650 682 aa9.41□□□□□ -0.9
PCAT29-201ENST00000558411 CEACAM21Q3KPI0 293 aa9.41□□□□□ -0.9
PCAT29-201ENST00000558411 FAM69BQ5VUD6 431 aa9.41□□□□□ -0.9
PCAT29-201ENST00000558411 SHISA6Q6ZSJ9 500 aa9.41□□□□□ -0.9
PCAT29-201ENST00000558411 OR8I2Q8N0Y5 310 aa9.41□□□□□ -0.9
PCAT29-201ENST00000558411 ZBTB34Q8NCN2 500 aa9.41□□□□□ -0.9
PCAT29-201ENST00000558411 ZNF439Q8NDP4 499 aa9.41□□□□□ -0.9
PCAT29-201ENST00000558411 HS3ST6Q96QI5 342 aa9.41□□□□□ -0.9
PCAT29-201ENST00000558411 RPP25Q9BUL9 199 aaKnown RBP9.41□□□□□ -0.9
PCAT29-201ENST00000558411 CLEC7AQ9BXN2 247 aa9.41□□□□□ -0.9
PCAT29-201ENST00000558411 KCNS2Q9ULS6 477 aa9.41□□□□□ -0.9
PCAT29-201ENST00000558411 RBM7Q9Y580 266 aaKnown RBP9.41□□□□□ -0.9
PCAT29-201ENST00000558411 RTTNQ86VV8 2226 aa9.41□□□□□ -0.9
PCAT29-201ENST00000558411 IGLV3-12A0A075B6K2 115 aa9.4□□□□□ -0.9
PCAT29-201ENST00000558411 TAX1BP3O14907 124 aa9.4□□□□□ -0.9
PCAT29-201ENST00000558411 RAMP3O60896 148 aa9.4□□□□□ -0.9
PCAT29-201ENST00000558411 ZFAND5O76080 213 aa9.4□□□□□ -0.9
PCAT29-201ENST00000558411 AMY1AP04745 511 aa9.4□□□□□ -0.9
PCAT29-201ENST00000558411 LINC00869P0C866 280 aa9.4□□□□□ -0.9
PCAT29-201ENST00000558411 ARL14EPLP0DKL9 152 aa9.4□□□□□ -0.9
PCAT29-201ENST00000558411 DEFA4P12838 97 aa9.4□□□□□ -0.9
PCAT29-201ENST00000558411 GLB1P16278 677 aa9.4□□□□□ -0.9
PCAT29-201ENST00000558411 ARF6P62330 175 aa9.4□□□□□ -0.9
PCAT29-201ENST00000558411 MRPS21P82921 87 aaKnown RBP9.4□□□□□ -0.9
PCAT29-201ENST00000558411 PRR27Q6MZM9 219 aa9.4□□□□□ -0.9
PCAT29-201ENST00000558411 PET117Q6UWS5 81 aa9.4□□□□□ -0.9
PCAT29-201ENST00000558411 DRAM1Q8N682 238 aa9.4□□□□□ -0.9
PCAT29-201ENST00000558411 IL36RNQ9UBH0 155 aa9.4□□□□□ -0.9
PCAT29-201ENST00000558411 KIAA1549Q9HCM3 1950 aa9.4□□□□□ -0.9
PCAT29-201ENST00000558411 IGHV3-15A0A0B4J1V0 119 aa9.4□□□□□ -0.91
PCAT29-201ENST00000558411 TRAV24A0A0B4J272 114 aa9.4□□□□□ -0.91
PCAT29-201ENST00000558411 ODAMA1E959 279 aa9.4□□□□□ -0.91
PCAT29-201ENST00000558411 BMPR1BO00238 502 aa9.4□□□□□ -0.91
PCAT29-201ENST00000558411 CDIPTO14735 213 aa9.4□□□□□ -0.91
PCAT29-201ENST00000558411 WISP2O76076 250 aa9.4□□□□□ -0.91
PCAT29-201ENST00000558411 DKK1O94907 266 aa9.4□□□□□ -0.91
PCAT29-201ENST00000558411 FRMD6-AS1P0C7T7 363 aa9.4□□□□□ -0.91
PCAT29-201ENST00000558411 AREGP15514 252 aa9.4□□□□□ -0.91
PCAT29-201ENST00000558411 SRIP30626 198 aa9.4□□□□□ -0.91
PCAT29-201ENST00000558411 CLDN18P56856 261 aa9.4□□□□□ -0.91
PCAT29-201ENST00000558411 RPL31P62899 125 aaKnown RBP9.4□□□□□ -0.91
PCAT29-201ENST00000558411 PARM1Q6UWI2 310 aa9.4□□□□□ -0.91
PCAT29-201ENST00000558411 TMEM92Q6UXU6 159 aa9.4□□□□□ -0.91
PCAT29-201ENST00000558411 COLCA1Q6ZS62 124 aa9.4□□□□□ -0.91
PCAT29-201ENST00000558411 FAM58AQ8N1B3 248 aa9.4□□□□□ -0.91
PCAT29-201ENST00000558411 OR8B3Q8NGG8 313 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms