RNA–Protein interactions for RNA: ENST00000558338.1

VPS13C-206, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 1,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-206ENST00000558338 RPL35P42766 123 aaKnown RBP6.05□□□□□ -1.44
VPS13C-206ENST00000558338 GATA4P43694 442 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 ZNF83P51522 516 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 CEBPGP53567 150 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 GNB2P62879 340 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 DLK1P80370 383 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 EDDM3AQ14507 147 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 VWC2Q2TAL6 325 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 AARDQ4LEZ3 155 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 OR2B11Q5JQS5 317 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 OR8G2PQ6IF36 304 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 SEM1Q6ZVN7 128 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 SSX8Q7RTT4 187 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.05□□□□□ -1.44
VPS13C-206ENST00000558338 C2CD4CQ8TF44 421 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 S100PBPQ96BU1 408 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 R3HDM4Q96D70 268 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 MANBALQ9NQG1 85 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 SLC39A9Q9NUM3 307 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 GNG12Q9UBI6 72 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 GAB2Q9UQC2 676 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 CFAP54Q96N23 3096 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 VPS13AQ96RL7 3174 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 IGLV3-9A0A075B6K5 115 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 IGKV1D-17A0A075B6S4 117 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 ZNF98A6NK75 572 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 ZFP92A6NM28 416 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 MPDU1O75352 247 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 THBDP07204 575 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 SMIM6P0DI80 62 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 FGF7P21781 194 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 DUTP33316 252 aaKnown RBP6.05□□□□□ -1.44
VPS13C-206ENST00000558338 NKX6-1P78426 367 aaPredicted RBP6.05□□□□□ -1.44
VPS13C-206ENST00000558338 S100A12P80511 92 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 MORN2Q502X0 79 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 LCN15Q6UWW0 184 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 BTNL3Q6UXE8 466 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 ZFP82Q8N141 532 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 FAM24BQ8N5W8 94 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 OR52E5Q8NH55 327 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 LHX4Q969G2 390 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 ISOC2Q96AB3 205 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 YPEL4Q96NS1 127 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 OR2V2Q96R30 315 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 ZNF251Q9BRH9 671 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 GGACTQ9BVM4 153 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 ACTR3CQ9C0K3 210 aaPredicted RBP6.05□□□□□ -1.44
VPS13C-206ENST00000558338 ESRP2Q9H6T0 727 aaKnown RBP6.05□□□□□ -1.44
VPS13C-206ENST00000558338 ZNF665Q9H7R5 613 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 KCNIP2Q9NS61 270 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 TMEM242Q9NWH2 141 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 METTL1Q9UBP6 276 aaKnown RBP6.05□□□□□ -1.44
VPS13C-206ENST00000558338 DUSP13Q9UII6 198 aa6.05□□□□□ -1.44
VPS13C-206ENST00000558338 IGHV3-43A0A0B4J1X8 118 aa6.04□□□□□ -1.44
VPS13C-206ENST00000558338 C5orf52A6NGY3 159 aa6.04□□□□□ -1.44
VPS13C-206ENST00000558338 PMS2P5A8MQ11 134 aa6.04□□□□□ -1.44
VPS13C-206ENST00000558338 A8MXE2 369 aa6.04□□□□□ -1.44
VPS13C-206ENST00000558338 CYB5R3P00387 301 aaPredicted RBP6.04□□□□□ -1.44
VPS13C-206ENST00000558338 LHBP01229 141 aa6.04□□□□□ -1.44
VPS13C-206ENST00000558338 ARG1P05089 322 aa6.04□□□□□ -1.44
VPS13C-206ENST00000558338 CLEC3BP05452 202 aa6.04□□□□□ -1.44
VPS13C-206ENST00000558338 S100A9P06702 114 aaKnown RBP6.04□□□□□ -1.44
VPS13C-206ENST00000558338 IGHV3-43DP0DP04 118 aa6.04□□□□□ -1.44
VPS13C-206ENST00000558338 DAOP14920 347 aa6.04□□□□□ -1.44
VPS13C-206ENST00000558338 TMEM11P17152 192 aa6.04□□□□□ -1.44
VPS13C-206ENST00000558338 EGR1P18146 543 aa6.04□□□□□ -1.44
VPS13C-206ENST00000558338 PSMB3P49720 205 aa6.04□□□□□ -1.44
VPS13C-206ENST00000558338 ELLP55199 621 aaPredicted RBP6.04□□□□□ -1.44
VPS13C-206ENST00000558338 SPCS3P61009 180 aa6.04□□□□□ -1.44
VPS13C-206ENST00000558338 RAB11AP62491 216 aa6.04□□□□□ -1.44
VPS13C-206ENST00000558338 ZNF726P1Q15940 193 aa6.04□□□□□ -1.44
VPS13C-206ENST00000558338 ACOT6Q3I5F7 207 aaPredicted RBP6.04□□□□□ -1.44
VPS13C-206ENST00000558338 PDLIM3Q53GG5 364 aaPredicted RBP6.04□□□□□ -1.44
VPS13C-206ENST00000558338 PRAMEF5Q5TYX0 476 aa6.04□□□□□ -1.44
VPS13C-206ENST00000558338 HEPN1Q6WQI6 88 aa6.04□□□□□ -1.44
VPS13C-206ENST00000558338 OR13D1Q8NGV5 346 aa6.04□□□□□ -1.44
VPS13C-206ENST00000558338 OR4A16Q8NH70 328 aa6.04□□□□□ -1.44
VPS13C-206ENST00000558338 OR4S2Q8NH73 311 aa6.04□□□□□ -1.44
VPS13C-206ENST00000558338 FAM222BQ8WU58 562 aa6.04□□□□□ -1.44
VPS13C-206ENST00000558338 ADTRPQ96IZ2 230 aa6.04□□□□□ -1.44
VPS13C-206ENST00000558338 C12orf57Q99622 126 aa6.04□□□□□ -1.44
VPS13C-206ENST00000558338 AGMATQ9BSE5 352 aa6.04□□□□□ -1.44
VPS13C-206ENST00000558338 CTDSP1Q9GZU7 261 aa6.04□□□□□ -1.44
VPS13C-206ENST00000558338 FAM234AQ9H0X4 552 aa6.04□□□□□ -1.44
VPS13C-206ENST00000558338 CALYQ9NYX4 217 aa6.04□□□□□ -1.44
VPS13C-206ENST00000558338 CLN8Q9UBY8 286 aa6.04□□□□□ -1.44
VPS13C-206ENST00000558338 IL19Q9UHD0 177 aa6.04□□□□□ -1.44
VPS13C-206ENST00000558338 FAM215AQ9Y5M1 114 aa6.04□□□□□ -1.44
VPS13C-206ENST00000558338 FRYLO94915 3013 aa6.04□□□□□ -1.44
VPS13C-206ENST00000558338 DMDP11532 3685 aa6.03□□□□□ -1.44
VPS13C-206ENST00000558338 TRGV10A0A0A0MS01 117 aa6.03□□□□□ -1.44
VPS13C-206ENST00000558338 KRTAP4-8A0A0G2JLE6 195 aa6.03□□□□□ -1.44
VPS13C-206ENST00000558338 hCG_1809904A0A1W2PP81 198 aa6.03□□□□□ -1.44
VPS13C-206ENST00000558338 A0A1W2PR64 198 aa6.03□□□□□ -1.44
VPS13C-206ENST00000558338 A0A1W2PRV1 198 aa6.03□□□□□ -1.44
VPS13C-206ENST00000558338 LINC00473A8K010 186 aa6.03□□□□□ -1.44
VPS13C-206ENST00000558338 TMEM250H0YL14 139 aa6.03□□□□□ -1.44
VPS13C-206ENST00000558338 M0R1X1 148 aa6.03□□□□□ -1.44
VPS13C-206ENST00000558338 CYB5BO43169 146 aa6.03□□□□□ -1.44
VPS13C-206ENST00000558338 ZG16O60844 167 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms