RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 NGBQ9NPG2 151 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 MANBALQ9NQG1 85 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 RPRMQ9NS64 109 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 SLC39A9Q9NUM3 307 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 PSG11Q9UQ72 335 aa6.92□□□□□ -1.3
SPG11-209ENST00000558253 FREM1Q5H8C1 2179 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 MED13Q9UHV7 2174 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 KBTBD11-OT1A0A1B0GTJ5 212 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 CTXND1A0A1B0GTU2 59 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 SMCO3A2RU48 225 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 MARCH11A6NNE9 402 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 CEBPZOSA8MTT3 80 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 C17orf98A8MV24 154 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 FNDC10F2Z333 226 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 TMEM250H0YL14 139 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 C16orf97H3BN30 126 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 H3BP45 60 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 KLK10O43240 276 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 ZG16O60844 167 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 S1PR2O95136 353 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 OR2C1O95371 312 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 HRASP01112 189 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 NQO2P16083 231 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 CD40P25942 277 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 S100A2P29034 98 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 CEBPDP49716 269 aaPredicted RBP6.91□□□□□ -1.3
SPG11-209ENST00000558253 PSMB3P49720 205 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 RAB11AP62491 216 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 RPL30P62888 115 aaKnown RBP6.91□□□□□ -1.3
SPG11-209ENST00000558253 CCL20P78556 96 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 TNFAIP6P98066 277 aaPredicted RBP6.91□□□□□ -1.3
SPG11-209ENST00000558253 RUNX1Q01196 453 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 MEF2CQ06413 473 aaPredicted RBP6.91□□□□□ -1.3
SPG11-209ENST00000558253 TCF15Q12870 199 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 HAGHQ16775 308 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 ACOT6Q3I5F7 207 aaPredicted RBP6.91□□□□□ -1.3
SPG11-209ENST00000558253 TEX36Q5VZQ5 186 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 HAPLN4Q86UW8 402 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 ZNF808Q8N4W9 903 aaPredicted RBP6.91□□□□□ -1.3
SPG11-209ENST00000558253 OR4A16Q8NH70 328 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 R3HDM4Q96D70 268 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 RAB39BQ96DA2 213 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 RCC1LQ96I51 464 aaKnown RBP6.91□□□□□ -1.3
SPG11-209ENST00000558253 RARRES2Q99969 163 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 MRPL18Q9H0U6 180 aaKnown RBP6.91□□□□□ -1.3
SPG11-209ENST00000558253 ZNF665Q9H7R5 613 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 GFOD1Q9NXC2 390 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 CALYQ9NYX4 217 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 CLN8Q9UBY8 286 aa6.91□□□□□ -1.3
SPG11-209ENST00000558253 PUS1Q9Y606 427 aaKnown RBP eCLIP6.91□□□□□ -1.3
SPG11-209ENST00000558253 TRGV8A0A0C4DH27 118 aa6.9□□□□□ -1.3
SPG11-209ENST00000558253 MAP1LC3B2A6NCE7 125 aa6.9□□□□□ -1.3
SPG11-209ENST00000558253 NKX6-3A6NJ46 265 aa6.9□□□□□ -1.3
SPG11-209ENST00000558253 PMS2P5A8MQ11 134 aa6.9□□□□□ -1.3
SPG11-209ENST00000558253 RAMP3O60896 148 aa6.9□□□□□ -1.3
SPG11-209ENST00000558253 RBMXL2O75526 392 aaKnown RBP6.9□□□□□ -1.3
SPG11-209ENST00000558253 NXPH3O95157 252 aa6.9□□□□□ -1.3
SPG11-209ENST00000558253 IGHV2-5P01817 119 aa6.9□□□□□ -1.3
SPG11-209ENST00000558253 MDKP21741 143 aaPredicted RBP6.9□□□□□ -1.3
SPG11-209ENST00000558253 SSTR5P35346 364 aa6.9□□□□□ -1.3
SPG11-209ENST00000558253 LOXL3P58215 753 aa6.9□□□□□ -1.3
SPG11-209ENST00000558253 BRWD1-AS2P59051 145 aa6.9□□□□□ -1.3
SPG11-209ENST00000558253 TAS2R60P59551 318 aa6.9□□□□□ -1.3
SPG11-209ENST00000558253 OR2B8PP59922 312 aa6.9□□□□□ -1.3
SPG11-209ENST00000558253 ARL16Q0P5N6 197 aa6.9□□□□□ -1.3
SPG11-209ENST00000558253 ZNF816Q0VGE8 651 aaPredicted RBP6.9□□□□□ -1.3
SPG11-209ENST00000558253 EDDM3AQ14507 147 aa6.9□□□□□ -1.3
SPG11-209ENST00000558253 HNF4GQ14541 408 aa6.9□□□□□ -1.3
SPG11-209ENST00000558253 SSX2Q16385 188 aa6.9□□□□□ -1.3
SPG11-209ENST00000558253 POU2AF1Q16633 256 aa6.9□□□□□ -1.3
SPG11-209ENST00000558253 STUMQ69YW2 141 aa6.9□□□□□ -1.3
SPG11-209ENST00000558253 SSX9Q7RTT3 188 aa6.9□□□□□ -1.3
SPG11-209ENST00000558253 MOGAT3Q86VF5 341 aa6.9□□□□□ -1.3
SPG11-209ENST00000558253 C1orf87Q8N0U7 546 aa6.9□□□□□ -1.3
SPG11-209ENST00000558253 ARL6IP6Q8N6S5 226 aa6.9□□□□□ -1.3
SPG11-209ENST00000558253 OR13D1Q8NGV5 346 aa6.9□□□□□ -1.3
SPG11-209ENST00000558253 LHX4Q969G2 390 aa6.9□□□□□ -1.3
SPG11-209ENST00000558253 PFDN5Q99471 154 aa6.9□□□□□ -1.3
SPG11-209ENST00000558253 SSX3Q99909 188 aa6.9□□□□□ -1.3
SPG11-209ENST00000558253 MAP1LC3BQ9GZQ8 125 aa6.9□□□□□ -1.3
SPG11-209ENST00000558253 FKBP11Q9NYL4 201 aa6.9□□□□□ -1.3
SPG11-209ENST00000558253 GNG13Q9P2W3 67 aa6.9□□□□□ -1.3
SPG11-209ENST00000558253 FZR1Q9UM11 496 aa6.9□□□□□ -1.3
SPG11-209ENST00000558253 ZNF407Q9C0G0 2248 aa6.9□□□□□ -1.3
SPG11-209ENST00000558253 VCANP13611 3396 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 CNTRLQ7Z7A1 2325 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 GPR179Q6PRD1 2367 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 TRAV38-1A0A0B4J264 116 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 UBE2L5PA0A1B0GUS4 154 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 hADV38S2A0JD32 116 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 M0R1X1 148 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 SPRY3O43610 288 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 FCGR3BO75015 233 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 ARG1P05089 322 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 FGF7P21781 194 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 DLK1P80370 383 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 RBPJQ06330 500 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 FABP9Q0Z7S8 132 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 RAB31Q13636 194 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 IZUMO4Q1ZYL8 232 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms