RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 AKIP1Q9NQ31 210 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 MBD2Q9UBB5 411 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 CKLFQ9UBR5 152 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 FBXL7Q9UJT9 491 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 ZNF221Q9UK13 617 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 EXOSC1Q9Y3B2 195 aaKnown RBP3.86□□□□□ -1.79
SPG11-208ENST00000558155 ZNF320A2RRD8 509 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 XRCC3O43542 346 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 PDCD6O75340 191 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 CRTAPO75718 401 aaPredicted RBP3.85□□□□□ -1.79
SPG11-208ENST00000558155 SCAF4O95104 1147 aaKnown RBP3.85□□□□□ -1.79
SPG11-208ENST00000558155 OR2C1O95371 312 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 IGKV1-16P04430 117 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 CRYGBP07316 175 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 MGMTP16455 207 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 ZBTB25P24278 435 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 DEFA5Q01523 94 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 PJVKQ0ZLH3 352 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 CBX3Q13185 183 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 EXOSC2Q13868 293 aaKnown RBP3.85□□□□□ -1.79
SPG11-208ENST00000558155 RBMS2Q15434 407 aaKnown RBP3.85□□□□□ -1.79
SPG11-208ENST00000558155 HMGN3Q15651 99 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 ATP6AP1Q15904 470 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 DEFB135Q30KP9 77 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 CCDC58Q4VC31 144 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 AWAT2Q6E213 333 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 OR4A47Q6IF82 309 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 SLC25A42Q86VD7 318 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 TMEM61Q8N0U2 210 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 JAGN1Q8N5M9 183 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 OR2C3Q8N628 320 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 ZNF383Q8NA42 475 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 ZBTB8BQ8NAP8 495 aaPredicted RBP3.85□□□□□ -1.79
SPG11-208ENST00000558155 UXS1Q8NBZ7 420 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 NECAP1Q8NC96 275 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 OR1L6Q8NGR2 347 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 C11orf45Q8TAV5 145 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 SETD6Q8TBK2 473 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 MUL1Q969V5 352 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 LGALS12Q96DT0 336 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 Q96MT0 163 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 AGMATQ9BSE5 352 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 GABARAPL3Q9BY60 117 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 C11orf54Q9H0W9 315 aaPredicted RBP3.85□□□□□ -1.79
SPG11-208ENST00000558155 RIMS4Q9H426 269 aaPredicted RBP3.85□□□□□ -1.79
SPG11-208ENST00000558155 CHMP1AQ9HD42 196 aaPredicted RBP3.85□□□□□ -1.79
SPG11-208ENST00000558155 SLC35D1Q9NTN3 355 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 ERVK13-1Q9NX77 482 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 FBXL17Q9UF56 701 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 ZNF230Q9UIE0 474 aaPredicted RBP3.85□□□□□ -1.79
SPG11-208ENST00000558155 MGAT4AQ9UM21 535 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 ALMS1Q8TCU4 4167 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 HERC2O95714 4834 aa3.85□□□□□ -1.79
SPG11-208ENST00000558155 TRBV9A0A0B4J1U6 114 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 A0A1B0GVY2 172 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 PRSS29PA6NIE9 313 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 IGLL5B9A064 214 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 PPP5D1E7EU14 171 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 SHOXO15266 292 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 GYG2O15488 501 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 PROP1O75360 226 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 RBMXL2O75526 392 aaKnown RBP3.84□□□□□ -1.79
SPG11-208ENST00000558155 ACTL6BO94805 426 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 IGLV2-23P01705 113 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 SCTP09683 121 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 GSTT2P0CG29 244 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 GSTT2BP0CG30 244 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 APELAP0DMC3 54 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 RRASP10301 218 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 FCGR1AP12314 374 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 IGFBP3P17936 291 aaPredicted RBP3.84□□□□□ -1.79
SPG11-208ENST00000558155 LINC00205P59089 165 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 NANOS2P60321 138 aaKnown RBP3.84□□□□□ -1.79
SPG11-208ENST00000558155 B2MP61769 119 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 SSBP2P81877 361 aaPredicted RBP3.84□□□□□ -1.79
SPG11-208ENST00000558155 TPBGQ13641 420 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 MED22Q15528 200 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 TNXAQ16473 311 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 C15orf32Q32M92 178 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 VMA21Q3ZAQ7 101 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 SIGIRRQ6IA17 410 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 TMPRSS11AQ6ZMR5 421 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 AMIGO2Q86SJ2 522 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 TTC9CQ8N5M4 171 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 GVQW1Q8N7I0 195 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 TEX45Q8NA69 505 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 KCNG3Q8TAE7 436 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 MARC2Q969Z3 335 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 PTX4Q96A99 478 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 Q96M66 194 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 RARRES2Q99969 163 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 FAAP24Q9BTP7 215 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 C6orf62Q9GZU0 229 aaPredicted RBP3.84□□□□□ -1.79
SPG11-208ENST00000558155 MRPL27Q9P0M9 148 aaKnown RBP3.84□□□□□ -1.79
SPG11-208ENST00000558155 GHRLQ9UBU3 117 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 APLNQ9ULZ1 77 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 POMPQ9Y244 141 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 RPL36Q9Y3U8 105 aaKnown RBP3.84□□□□□ -1.79
SPG11-208ENST00000558155 AP4S1Q9Y587 144 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 ORC6Q9Y5N6 252 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms