RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 A0A1W2PPE2 198 aa16.6■□□□□ 0.25
SNRPA1-205ENST00000558036 A0A1W2PR64 198 aa16.6■□□□□ 0.25
SNRPA1-205ENST00000558036 A0A1W2PRV1 198 aa16.6■□□□□ 0.25
SNRPA1-205ENST00000558036 HPRT1P00492 218 aa16.6■□□□□ 0.25
SNRPA1-205ENST00000558036 RBP4P02753 201 aa16.6■□□□□ 0.25
SNRPA1-205ENST00000558036 ID3Q02535 119 aa16.6■□□□□ 0.25
SNRPA1-205ENST00000558036 ZNF345Q14585 488 aa16.6■□□□□ 0.25
SNRPA1-205ENST00000558036 CLEC2AQ6UVW9 174 aa16.6■□□□□ 0.25
SNRPA1-205ENST00000558036 CLEC9AQ6UXN8 241 aa16.6■□□□□ 0.25
SNRPA1-205ENST00000558036 ST6GALNAC6Q969X2 333 aa16.6■□□□□ 0.25
SNRPA1-205ENST00000558036 CLEC7AQ9BXN2 247 aa16.6■□□□□ 0.25
SNRPA1-205ENST00000558036 PLEKHA2Q9HB19 425 aa16.6■□□□□ 0.25
SNRPA1-205ENST00000558036 CFDP00746 253 aaPredicted RBP16.59■□□□□ 0.25
SNRPA1-205ENST00000558036 IGLV1-47P01700 117 aa16.59■□□□□ 0.25
SNRPA1-205ENST00000558036 KLRD1Q13241 179 aa16.59■□□□□ 0.25
SNRPA1-205ENST00000558036 H2BFWTQ7Z2G1 175 aa16.59■□□□□ 0.25
SNRPA1-205ENST00000558036 OR4S2Q8NH73 311 aa16.59■□□□□ 0.25
SNRPA1-205ENST00000558036 GCN1Q92616 2671 aaKnown RBP16.59■□□□□ 0.25
SNRPA1-205ENST00000558036 CELSR1Q9NYQ6 3014 aa16.58■□□□□ 0.25
SNRPA1-205ENST00000558036 A0A0D9SG52 128 aa16.58■□□□□ 0.25
SNRPA1-205ENST00000558036 RBFOX2O43251 390 aaKnown RBP eCLIP16.58■□□□□ 0.25
SNRPA1-205ENST00000558036 HKR1P10072 659 aa16.58■□□□□ 0.25
SNRPA1-205ENST00000558036 SLC25A6P12236 298 aa16.58■□□□□ 0.25
SNRPA1-205ENST00000558036 ADTRPQ96IZ2 230 aa16.58■□□□□ 0.25
SNRPA1-205ENST00000558036 DOPEY2Q9Y3R5 2298 aa16.58■□□□□ 0.24
SNRPA1-205ENST00000558036 APCP25054 2843 aa16.58■□□□□ 0.24
SNRPA1-205ENST00000558036 E5RGE8 158 aa16.58■□□□□ 0.24
SNRPA1-205ENST00000558036 RGS13O14921 159 aa16.58■□□□□ 0.24
SNRPA1-205ENST00000558036 TMEM50AO95807 157 aa16.58■□□□□ 0.24
SNRPA1-205ENST00000558036 HLA-DRB5Q30154 266 aa16.58■□□□□ 0.24
SNRPA1-205ENST00000558036 AQP10Q96PS8 301 aa16.58■□□□□ 0.24
SNRPA1-205ENST00000558036 BARX1Q9HBU1 254 aaPredicted RBP16.58■□□□□ 0.24
SNRPA1-205ENST00000558036 CHST1O43916 411 aa16.57■□□□□ 0.24
SNRPA1-205ENST00000558036 RPL12P30050 165 aaKnown RBP16.57■□□□□ 0.24
SNRPA1-205ENST00000558036 NUP62P37198 522 aaPredicted RBP16.57■□□□□ 0.24
SNRPA1-205ENST00000558036 KIR2DS2P43631 304 aa16.57■□□□□ 0.24
SNRPA1-205ENST00000558036 PAX2Q02962 417 aa16.57■□□□□ 0.24
SNRPA1-205ENST00000558036 MIDNQ504T8 468 aa16.57■□□□□ 0.24
SNRPA1-205ENST00000558036 TEX261Q6UWH6 196 aa16.57■□□□□ 0.24
SNRPA1-205ENST00000558036 TMEM186Q96B77 213 aa16.57■□□□□ 0.24
SNRPA1-205ENST00000558036 SLC35D1Q9NTN3 355 aa16.57■□□□□ 0.24
SNRPA1-205ENST00000558036 U3KQ87 197 aa16.57■□□□□ 0.24
SNRPA1-205ENST00000558036 A0A1W2PRD5 423 aa16.57■□□□□ 0.24
SNRPA1-205ENST00000558036 A0A1W2PRF3 423 aa16.57■□□□□ 0.24
SNRPA1-205ENST00000558036 A0A1W2PRM7 423 aa16.57■□□□□ 0.24
SNRPA1-205ENST00000558036 FAM157AC9JC47 383 aa16.57■□□□□ 0.24
SNRPA1-205ENST00000558036 ATG12O94817 140 aa16.57■□□□□ 0.24
SNRPA1-205ENST00000558036 OR9G9P0C7N8 305 aa16.57■□□□□ 0.24
SNRPA1-205ENST00000558036 C4BPBP20851 252 aa16.57■□□□□ 0.24
SNRPA1-205ENST00000558036 PRRX1P54821 245 aa16.57■□□□□ 0.24
SNRPA1-205ENST00000558036 OR4P4Q8NGL7 312 aa16.57■□□□□ 0.24
SNRPA1-205ENST00000558036 C11orf1Q9H5F2 150 aa16.57■□□□□ 0.24
SNRPA1-205ENST00000558036 ZC4H2Q9NQZ6 224 aa16.57■□□□□ 0.24
SNRPA1-205ENST00000558036 ZFP57Q9NU63 452 aa16.57■□□□□ 0.24
SNRPA1-205ENST00000558036 ANKRD17O75179 2603 aaKnown RBP16.56■□□□□ 0.24
SNRPA1-205ENST00000558036 KANTRA0A1W2PQU2 76 aa16.56■□□□□ 0.24
SNRPA1-205ENST00000558036 VWC2LB2RUY7 222 aa16.56■□□□□ 0.24
SNRPA1-205ENST00000558036 H7C2Y5 167 aa16.56■□□□□ 0.24
SNRPA1-205ENST00000558036 M0R1W7 72 aa16.56■□□□□ 0.24
SNRPA1-205ENST00000558036 WRBO00258 174 aa16.56■□□□□ 0.24
SNRPA1-205ENST00000558036 ENSAO43768 121 aaKnown RBP16.56■□□□□ 0.24
SNRPA1-205ENST00000558036 RBMXL2O75526 392 aaKnown RBP16.56■□□□□ 0.24
SNRPA1-205ENST00000558036 SNAPC5O75971 98 aa16.56■□□□□ 0.24
SNRPA1-205ENST00000558036 ZNF137PP52743 207 aa16.56■□□□□ 0.24
SNRPA1-205ENST00000558036 OR2B8PP59922 312 aa16.56■□□□□ 0.24
SNRPA1-205ENST00000558036 TAGLNQ01995 201 aaKnown RBP16.56■□□□□ 0.24
SNRPA1-205ENST00000558036 TGIF2LXQ8IUE1 241 aa16.56■□□□□ 0.24
SNRPA1-205ENST00000558036 NABP2Q9BQ15 211 aa16.56■□□□□ 0.24
SNRPA1-205ENST00000558036 TRAV3A0A0B4J244 114 aa16.55■□□□□ 0.24
SNRPA1-205ENST00000558036 H0YJW9 148 aa16.55■□□□□ 0.24
SNRPA1-205ENST00000558036 BUB1B-PAK6H3BSN5 160 aa16.55■□□□□ 0.24
SNRPA1-205ENST00000558036 BCL2L11O43521 198 aa16.55■□□□□ 0.24
SNRPA1-205ENST00000558036 SPDEFO95238 335 aa16.55■□□□□ 0.24
SNRPA1-205ENST00000558036 NQO2P16083 231 aa16.55■□□□□ 0.24
SNRPA1-205ENST00000558036 CAV2P51636 162 aa16.55■□□□□ 0.24
SNRPA1-205ENST00000558036 LDLRAD2Q5SZI1 272 aa16.55■□□□□ 0.24
SNRPA1-205ENST00000558036 VMO1Q7Z5L0 202 aa16.55■□□□□ 0.24
SNRPA1-205ENST00000558036 BSCL2Q96G97 398 aaPredicted RBP16.55■□□□□ 0.24
SNRPA1-205ENST00000558036 RHOVQ96L33 236 aa16.55■□□□□ 0.24
SNRPA1-205ENST00000558036 IGHV3-72A0A0B4J1Y9 119 aa16.55■□□□□ 0.24
SNRPA1-205ENST00000558036 IGHV2-70DA0A0C4DH43 119 aa16.55■□□□□ 0.24
SNRPA1-205ENST00000558036 H3BP45 60 aa16.55■□□□□ 0.24
SNRPA1-205ENST00000558036 NDUFS8O00217 210 aa16.55■□□□□ 0.24
SNRPA1-205ENST00000558036 IAPPP10997 89 aa16.55■□□□□ 0.24
SNRPA1-205ENST00000558036 PRTN3P24158 256 aa16.55■□□□□ 0.24
SNRPA1-205ENST00000558036 ERVK-16P61578 105 aa16.55■□□□□ 0.24
SNRPA1-205ENST00000558036 RTL8BQ17RB0 113 aa16.55■□□□□ 0.24
SNRPA1-205ENST00000558036 SPINK9Q5DT21 86 aa16.55■□□□□ 0.24
SNRPA1-205ENST00000558036 BEND2Q8NDZ0 799 aa16.55■□□□□ 0.24
SNRPA1-205ENST00000558036 ZNF680Q8NEM1 530 aa16.55■□□□□ 0.24
SNRPA1-205ENST00000558036 OR13D1Q8NGV5 346 aa16.55■□□□□ 0.24
SNRPA1-205ENST00000558036 TNFRSF14Q92956 283 aa16.55■□□□□ 0.24
SNRPA1-205ENST00000558036 MARVELD3Q96A59 401 aa16.55■□□□□ 0.24
SNRPA1-205ENST00000558036 TMEM140Q9NV12 185 aa16.55■□□□□ 0.24
SNRPA1-205ENST00000558036 FAM24AA6NFZ4 105 aa16.54■□□□□ 0.24
SNRPA1-205ENST00000558036 SRRM4A7MD48 611 aaKnown RBP16.54■□□□□ 0.24
SNRPA1-205ENST00000558036 A8MXK9 166 aa16.54■□□□□ 0.24
SNRPA1-205ENST00000558036 ARG1P05089 322 aa16.54■□□□□ 0.24
SNRPA1-205ENST00000558036 HCP5Q6MZN7 132 aa16.54■□□□□ 0.24
SNRPA1-205ENST00000558036 OR5AN1Q8NGI8 311 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms