RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 CADM3Q8N126 398 aa10.88□□□□□ -0.67
SHMT2-234ENST00000557703 MFSD4AQ8N468 514 aa10.88□□□□□ -0.67
SHMT2-234ENST00000557703 OR4S2Q8NH73 311 aa10.88□□□□□ -0.67
SHMT2-234ENST00000557703 CHPT1Q8WUD6 406 aa10.88□□□□□ -0.67
SHMT2-234ENST00000557703 SCGB3A2Q96PL1 93 aa10.88□□□□□ -0.67
SHMT2-234ENST00000557703 PRRT1Q99946 306 aa10.88□□□□□ -0.67
SHMT2-234ENST00000557703 V9GYH0 126 aa10.88□□□□□ -0.67
SHMT2-234ENST00000557703 TENM1Q9UKZ4 2725 aa10.88□□□□□ -0.67
SHMT2-234ENST00000557703 AP4M1O00189 453 aa10.87□□□□□ -0.67
SHMT2-234ENST00000557703 RRHO14718 337 aa10.87□□□□□ -0.67
SHMT2-234ENST00000557703 B3GALNT1O75752 331 aa10.87□□□□□ -0.67
SHMT2-234ENST00000557703 IGKV1-16P04430 117 aa10.87□□□□□ -0.67
SHMT2-234ENST00000557703 FGF2P09038 288 aa10.87□□□□□ -0.67
SHMT2-234ENST00000557703 F2RL1P55085 397 aa10.87□□□□□ -0.67
SHMT2-234ENST00000557703 FXYD4P59646 89 aa10.87□□□□□ -0.67
SHMT2-234ENST00000557703 LIN54Q6MZP7 749 aa10.87□□□□□ -0.67
SHMT2-234ENST00000557703 LHFPL1Q86WI0 220 aa10.87□□□□□ -0.67
SHMT2-234ENST00000557703 COMMD1Q8N668 190 aa10.87□□□□□ -0.67
SHMT2-234ENST00000557703 TEX45Q8NA69 505 aa10.87□□□□□ -0.67
SHMT2-234ENST00000557703 DRAXINQ8NBI3 349 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-234ENST00000557703 VSTM2AQ8TAG5 236 aa10.87□□□□□ -0.67
SHMT2-234ENST00000557703 ZFAND1Q8TCF1 268 aa10.87□□□□□ -0.67
SHMT2-234ENST00000557703 RSRP1Q9BUV0 290 aa10.87□□□□□ -0.67
SHMT2-234ENST00000557703 WNT10AQ9GZT5 417 aa10.87□□□□□ -0.67
SHMT2-234ENST00000557703 CCL28Q9NRJ3 127 aa10.87□□□□□ -0.67
SHMT2-234ENST00000557703 SERTAD4Q9NUC0 356 aa10.87□□□□□ -0.67
SHMT2-234ENST00000557703 SLC2A8Q9NY64 477 aa10.87□□□□□ -0.67
SHMT2-234ENST00000557703 PTTG2Q9NZH5 202 aa10.87□□□□□ -0.67
SHMT2-234ENST00000557703 SCP2D1Q9UJQ7 156 aa10.87□□□□□ -0.67
SHMT2-234ENST00000557703 LINC00473A8K010 186 aa10.86□□□□□ -0.67
SHMT2-234ENST00000557703 SHOXO15266 292 aa10.86□□□□□ -0.67
SHMT2-234ENST00000557703 HRASP01112 189 aa10.86□□□□□ -0.67
SHMT2-234ENST00000557703 IGF1P05019 195 aa10.86□□□□□ -0.67
SHMT2-234ENST00000557703 VMA21Q3ZAQ7 101 aa10.86□□□□□ -0.67
SHMT2-234ENST00000557703 AADACL3Q5VUY0 350 aa10.86□□□□□ -0.67
SHMT2-234ENST00000557703 ZNF562Q6V9R5 426 aa10.86□□□□□ -0.67
SHMT2-234ENST00000557703 GLDNQ6ZMI3 551 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-234ENST00000557703 ZNF818PQ6ZRF7 136 aa10.86□□□□□ -0.67
SHMT2-234ENST00000557703 SLC35E3Q7Z769 313 aa10.86□□□□□ -0.67
SHMT2-234ENST00000557703 TOMM5Q8N4H5 51 aa10.86□□□□□ -0.67
SHMT2-234ENST00000557703 WFDC12Q8WWY7 111 aa10.86□□□□□ -0.67
SHMT2-234ENST00000557703 S100ZQ8WXG8 99 aa10.86□□□□□ -0.67
SHMT2-234ENST00000557703 HARBI1Q96MB7 349 aa10.86□□□□□ -0.67
SHMT2-234ENST00000557703 J3QRK9 145 aa10.85□□□□□ -0.67
SHMT2-234ENST00000557703 HPRT1P00492 218 aa10.85□□□□□ -0.67
SHMT2-234ENST00000557703 UBE2KP61086 200 aa10.85□□□□□ -0.67
SHMT2-234ENST00000557703 RND3P61587 244 aa10.85□□□□□ -0.67
SHMT2-234ENST00000557703 SLC35B1P78383 322 aa10.85□□□□□ -0.67
SHMT2-234ENST00000557703 PSG5Q15238 335 aa10.85□□□□□ -0.67
SHMT2-234ENST00000557703 ZNF79Q15937 498 aa10.85□□□□□ -0.67
SHMT2-234ENST00000557703 TCTEX1D2Q8WW35 142 aa10.85□□□□□ -0.67
SHMT2-234ENST00000557703 C5orf30Q96GV9 206 aa10.85□□□□□ -0.67
SHMT2-234ENST00000557703 TMEM68Q96MH6 324 aa10.85□□□□□ -0.67
SHMT2-234ENST00000557703 TINAGL1Q9GZM7 467 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-234ENST00000557703 SRRQ9GZT4 340 aa10.85□□□□□ -0.67
SHMT2-234ENST00000557703 PLEKHA2Q9HB19 425 aa10.85□□□□□ -0.67
SHMT2-234ENST00000557703 PIGBOS1A0A0B4J2F0 54 aa10.84□□□□□ -0.67
SHMT2-234ENST00000557703 M0QYG6 137 aa10.84□□□□□ -0.67
SHMT2-234ENST00000557703 FCGR3BO75015 233 aa10.84□□□□□ -0.67
SHMT2-234ENST00000557703 PGLYRP1O75594 196 aaPredicted RBP10.84□□□□□ -0.67
SHMT2-234ENST00000557703 CRYZL1O95825 349 aa10.84□□□□□ -0.67
SHMT2-234ENST00000557703 RPA2P15927 270 aa10.84□□□□□ -0.67
SHMT2-234ENST00000557703 F2RP25116 425 aa10.84□□□□□ -0.67
SHMT2-234ENST00000557703 CRIP2P52943 208 aaPredicted RBP10.84□□□□□ -0.67
SHMT2-234ENST00000557703 TAS2R31P59538 309 aa10.84□□□□□ -0.67
SHMT2-234ENST00000557703 TMEM267Q0VDI3 215 aaPredicted RBP10.84□□□□□ -0.67
SHMT2-234ENST00000557703 PLGLAQ15195 96 aa10.84□□□□□ -0.67
SHMT2-234ENST00000557703 CNPY1Q3B7I2 92 aa10.84□□□□□ -0.67
SHMT2-234ENST00000557703 FBLN7Q53RD9 439 aa10.84□□□□□ -0.67
SHMT2-234ENST00000557703 PPP1R27Q86WC6 154 aa10.84□□□□□ -0.67
SHMT2-234ENST00000557703 WIPF2Q8TF74 440 aaPredicted RBP10.84□□□□□ -0.67
SHMT2-234ENST00000557703 TRIM63Q969Q1 353 aa10.84□□□□□ -0.67
SHMT2-234ENST00000557703 CITED1Q99966 193 aa10.84□□□□□ -0.67
SHMT2-234ENST00000557703 COMMD9Q9P000 198 aa10.84□□□□□ -0.67
SHMT2-234ENST00000557703 SIGLEC9Q9Y336 463 aa10.84□□□□□ -0.67
SHMT2-234ENST00000557703 TNCP24821 2201 aa10.83□□□□□ -0.68
SHMT2-234ENST00000557703 NAP1L6A6NFF2 107 aa10.83□□□□□ -0.68
SHMT2-234ENST00000557703 ZNF735P0CB33 412 aa10.83□□□□□ -0.68
SHMT2-234ENST00000557703 RPL30P62888 115 aaKnown RBP10.83□□□□□ -0.68
SHMT2-234ENST00000557703 POU2AF1Q16633 256 aa10.83□□□□□ -0.68
SHMT2-234ENST00000557703 RNASE12Q5GAN4 147 aaKnown RBP10.83□□□□□ -0.68
SHMT2-234ENST00000557703 C9orf152Q5JTZ5 239 aa10.83□□□□□ -0.68
SHMT2-234ENST00000557703 TRIQKQ629K1 86 aa10.83□□□□□ -0.68
SHMT2-234ENST00000557703 CENPVQ7Z7K6 275 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-234ENST00000557703 CCDC71LQ8N9Z2 235 aa10.83□□□□□ -0.68
SHMT2-234ENST00000557703 OR4C16Q8NGL9 310 aa10.83□□□□□ -0.68
SHMT2-234ENST00000557703 OR4A5Q8NH83 315 aa10.83□□□□□ -0.68
SHMT2-234ENST00000557703 SGMS2Q8NHU3 365 aa10.83□□□□□ -0.68
SHMT2-234ENST00000557703 RITA1Q96K30 269 aa10.83□□□□□ -0.68
SHMT2-234ENST00000557703 C7orf50Q9BRJ6 194 aaKnown RBP10.83□□□□□ -0.68
SHMT2-234ENST00000557703 FXYD6Q9H0Q3 95 aa10.83□□□□□ -0.68
SHMT2-234ENST00000557703 OR51J1Q9H342 316 aa10.83□□□□□ -0.68
SHMT2-234ENST00000557703 METTL1Q9UBP6 276 aaKnown RBP10.83□□□□□ -0.68
SHMT2-234ENST00000557703 CENPXA8MT69 81 aa10.82□□□□□ -0.68
SHMT2-234ENST00000557703 IGLV2-23P01705 113 aa10.82□□□□□ -0.68
SHMT2-234ENST00000557703 OPN1MWP04001 364 aa10.82□□□□□ -0.68
SHMT2-234ENST00000557703 CRYGBP07316 175 aa10.82□□□□□ -0.68
SHMT2-234ENST00000557703 CTSDP07339 412 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-234ENST00000557703 OPN1MW2P0DN77 364 aa10.82□□□□□ -0.68
SHMT2-234ENST00000557703 OPN1MW3P0DN78 364 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms