RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 ZNF20P17024 532 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 C21orf33P30042 268 aaPredicted RBP4.5□□□□□ -1.69
VPS33B-207ENST00000557470 RCVRNP35243 200 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 HTR2BP41595 481 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 CRISP1P54107 249 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 SLURP1P55000 103 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 KRTAP10-2P60368 255 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 ZP1P60852 638 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 ISL1P61371 349 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 FLOT2Q14254 428 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 ZNF846Q147U1 533 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 PTGES3Q15185 160 aaKnown RBP4.5□□□□□ -1.69
VPS33B-207ENST00000557470 TATDN3Q17R31 274 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 RNF151Q2KHN1 245 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 PAN3Q58A45 887 aaKnown RBP4.5□□□□□ -1.69
VPS33B-207ENST00000557470 SAPCD1Q5SSQ6 148 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 RSBN1Q5VWQ0 802 aaPredicted RBP4.5□□□□□ -1.69
VPS33B-207ENST00000557470 NXNL2Q5VZ03 156 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 ELP2Q6IA86 826 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 PYHIN1Q6K0P9 492 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 TMEM65Q6PI78 240 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 CD164L2Q6UWJ8 174 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 FAM159AQ6UWV7 190 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 IZUMO2Q6UXV1 221 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 SLC16A12Q6ZSM3 486 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 ZNF767PQ75MW2 155 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 SAXO1Q8IYX7 474 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 PARP16Q8N5Y8 322 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 TCEANCQ8N8B7 351 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 OR6Q1Q8NGQ2 317 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 OR52N1Q8NH53 320 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 PLPPR1Q8TBJ4 325 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 RTN4IP1Q8WWV3 396 aaPredicted RBP4.5□□□□□ -1.69
VPS33B-207ENST00000557470 ARPC1AQ92747 370 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 SNAPC3Q92966 411 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 FGGYQ96C11 551 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 CCDC124Q96CT7 223 aaKnown RBP4.5□□□□□ -1.69
VPS33B-207ENST00000557470 SPATA25Q9BR10 227 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 KRTAP4-5Q9BYR2 181 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 RHOFQ9HBH0 211 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 DNAJC4Q9NNZ3 241 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 RAB9BQ9NP90 201 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 PEF1Q9UBV8 284 aaKnown RBP4.5□□□□□ -1.69
VPS33B-207ENST00000557470 DAPK2Q9UIK4 370 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 ZNF580Q9UK33 172 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 RAB26Q9ULW5 256 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 POMPQ9Y244 141 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 RBMX2Q9Y388 322 aaKnown RBP4.5□□□□□ -1.69
VPS33B-207ENST00000557470 WSB1Q9Y6I7 421 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 PLECQ15149 4684 aaKnown RBP4.5□□□□□ -1.69
VPS33B-207ENST00000557470 TRGV11A0A075B6L2 103 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 LINC01619G3V211 115 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 ATP6V0E1O15342 81 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 CCNKO75909 580 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 MT-ND2P03891 347 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 TFAP2AP05549 437 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 OR8U9P0C7N5 309 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 OR5H8P0DN80 308 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 EPHA2P29317 976 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 RAB9AP51151 201 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 PAX5Q02548 391 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 CDK10Q15131 360 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 HAGHQ16775 308 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 PXDC1Q5TGL8 231 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 TTC23Q5W5X9 447 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 SIGLEC15Q6ZMC9 328 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 Q6ZWC4 215 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 LHFPL3Q86UP9 236 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 TPRA1Q86W33 373 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 LYPD6Q86Y78 171 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 GID4Q8IVV7 300 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 LINC00311Q8N616 119 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 OR10H4Q8NGA5 316 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 OR10A7Q8NGE5 316 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 OR51A4Q8NGJ6 313 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 OR13C9Q8NGT0 318 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 OR10AC1Q8NH08 325 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 RNASE11Q8TAA1 199 aaKnown RBP4.49□□□□□ -1.69
VPS33B-207ENST00000557470 UBALD1Q8TB05 177 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 CNIH3Q8TBE1 160 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 TMEM163Q8TC26 289 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 MITD1Q8WV92 249 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 CANT1Q8WVQ1 401 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 ASB9Q96DX5 294 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 IL4I1Q96RQ9 567 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 RAB40CQ96S21 281 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 MBOAT4Q96T53 435 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 ALKBH7Q9BT30 221 aaPredicted RBP4.49□□□□□ -1.69
VPS33B-207ENST00000557470 PRRG3Q9BZD7 231 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 BARHL1Q9BZE3 327 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 TOLLIPQ9H0E2 274 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 MAGT1Q9H0U3 335 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 OR51J1Q9H342 316 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 AUNIPQ9H7T9 357 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 NUDT15Q9NV35 164 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 CCDC59Q9P031 241 aaKnown RBP4.49□□□□□ -1.69
VPS33B-207ENST00000557470 ZNF581Q9P0T4 197 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 ZNF107Q9UII5 783 aaPredicted RBP4.49□□□□□ -1.69
VPS33B-207ENST00000557470 GNG8Q9UK08 70 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 MYRFQ9Y2G1 1151 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms