RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 A0A0B4J203 849 aa17.34■□□□□ 0.37
ACTN1-220ENST00000556433 SRRM4A7MD48 611 aaKnown RBP17.34■□□□□ 0.37
ACTN1-220ENST00000556433 C3orf84H3BNL1 204 aa17.34■□□□□ 0.37
ACTN1-220ENST00000556433 ZP3P21754 424 aa17.34■□□□□ 0.37
ACTN1-220ENST00000556433 RSRP1Q9BUV0 290 aa17.34■□□□□ 0.37
ACTN1-220ENST00000556433 NDUFB11Q9NX14 153 aa17.34■□□□□ 0.37
ACTN1-220ENST00000556433 STUB1Q9UNE7 303 aa17.34■□□□□ 0.37
ACTN1-220ENST00000556433 HUWE1Q7Z6Z7 4374 aaKnown RBP17.33■□□□□ 0.37
ACTN1-220ENST00000556433 RRASP10301 218 aa17.33■□□□□ 0.36
ACTN1-220ENST00000556433 SRSF7Q16629 238 aaKnown RBP eCLIP17.33■□□□□ 0.363e-14■■■■□ 24.7
ACTN1-220ENST00000556433 ANKRD13BQ86YJ7 626 aa17.33■□□□□ 0.36
ACTN1-220ENST00000556433 RCHY1Q96PM5 261 aa17.33■□□□□ 0.36
ACTN1-220ENST00000556433 CENPOQ9BU64 300 aa17.33■□□□□ 0.36
ACTN1-220ENST00000556433 ATG5Q9H1Y0 275 aa17.33■□□□□ 0.36
ACTN1-220ENST00000556433 RYR3Q15413 4870 aa17.33■□□□□ 0.36
ACTN1-220ENST00000556433 STAB2Q8WWQ8 2551 aa17.33■□□□□ 0.36
ACTN1-220ENST00000556433 C22orf42Q6IC83 251 aa17.32■□□□□ 0.36
ACTN1-220ENST00000556433 H1FOOQ8IZA3 346 aaPredicted RBP17.32■□□□□ 0.36
ACTN1-220ENST00000556433 ADTRPQ96IZ2 230 aa17.32■□□□□ 0.36
ACTN1-220ENST00000556433 TINAGL1Q9GZM7 467 aaPredicted RBP17.32■□□□□ 0.36
ACTN1-220ENST00000556433 IGKV1D-8A0A087WSZ0 117 aa17.31■□□□□ 0.36
ACTN1-220ENST00000556433 BRI3O95415 125 aa17.31■□□□□ 0.36
ACTN1-220ENST00000556433 IGLV1-51P01701 117 aa17.31■□□□□ 0.36
ACTN1-220ENST00000556433 DUTP33316 252 aaKnown RBP17.31■□□□□ 0.36
ACTN1-220ENST00000556433 VMA21Q3ZAQ7 101 aa17.31■□□□□ 0.36
ACTN1-220ENST00000556433 Q6ZS49 121 aa17.31■□□□□ 0.36
ACTN1-220ENST00000556433 PHB2Q99623 299 aa17.31■□□□□ 0.36
ACTN1-220ENST00000556433 COA4Q9NYJ1 87 aa17.31■□□□□ 0.36
ACTN1-220ENST00000556433 ELF5Q9UKW6 265 aaPredicted RBP17.31■□□□□ 0.36
ACTN1-220ENST00000556433 MSGN1A6NI15 193 aa17.3■□□□□ 0.36
ACTN1-220ENST00000556433 J3QRK9 145 aa17.3■□□□□ 0.36
ACTN1-220ENST00000556433 APELAP0DMC3 54 aa17.3■□□□□ 0.36
ACTN1-220ENST00000556433 GALP22466 123 aa17.3■□□□□ 0.36
ACTN1-220ENST00000556433 AADACP22760 399 aa17.3■□□□□ 0.36
ACTN1-220ENST00000556433 DEFA5Q01523 94 aa17.3■□□□□ 0.36
ACTN1-220ENST00000556433 KLF5Q13887 457 aaPredicted RBP17.3■□□□□ 0.36
ACTN1-220ENST00000556433 ARL6IP1Q15041 203 aa17.3■□□□□ 0.36
ACTN1-220ENST00000556433 MRGPRG-AS1Q2M3A8 158 aa17.3■□□□□ 0.36
ACTN1-220ENST00000556433 CDNFQ49AH0 187 aa17.3■□□□□ 0.36
ACTN1-220ENST00000556433 NR2C2APQ86WQ0 139 aa17.3■□□□□ 0.36
ACTN1-220ENST00000556433 TEX45Q8NA69 505 aa17.3■□□□□ 0.36
ACTN1-220ENST00000556433 DDB2Q92466 427 aa17.3■□□□□ 0.36
ACTN1-220ENST00000556433 ZMAT4Q9H898 229 aa17.3■□□□□ 0.36
ACTN1-220ENST00000556433 SMIM30A4D0T7 59 aa17.29■□□□□ 0.36
ACTN1-220ENST00000556433 CRYZL1O95825 349 aa17.29■□□□□ 0.36
ACTN1-220ENST00000556433 UBE2KP61086 200 aa17.29■□□□□ 0.36
ACTN1-220ENST00000556433 TNXAQ16473 311 aa17.29■□□□□ 0.36
ACTN1-220ENST00000556433 PRSS8Q16651 343 aa17.29■□□□□ 0.36
ACTN1-220ENST00000556433 ST6GALNAC5Q9BVH7 336 aa17.29■□□□□ 0.36
ACTN1-220ENST00000556433 PEF1Q9UBV8 284 aaKnown RBP17.29■□□□□ 0.36
ACTN1-220ENST00000556433 LINC00473A8K010 186 aa17.28■□□□□ 0.36
ACTN1-220ENST00000556433 DTYMKP23919 212 aa17.28■□□□□ 0.36
ACTN1-220ENST00000556433 SYNJ2BPP57105 145 aa17.28■□□□□ 0.36
ACTN1-220ENST00000556433 ZNF343Q6P1L6 599 aa17.28■□□□□ 0.36
ACTN1-220ENST00000556433 IDO2Q6ZQW0 420 aa17.28■□□□□ 0.36
ACTN1-220ENST00000556433 Q8N1Y9 231 aa17.28■□□□□ 0.36
ACTN1-220ENST00000556433 OR9G4Q8NGQ1 327 aa17.28■□□□□ 0.36
ACTN1-220ENST00000556433 USMG5Q96IX5 58 aa17.28■□□□□ 0.36
ACTN1-220ENST00000556433 RAB26Q9ULW5 256 aa17.28■□□□□ 0.36
ACTN1-220ENST00000556433 MPPED1O15442 326 aa17.27■□□□□ 0.36
ACTN1-220ENST00000556433 DYRK1AQ13627 763 aa17.27■□□□□ 0.36
ACTN1-220ENST00000556433 OSR1Q8TAX0 266 aaPredicted RBP17.27■□□□□ 0.36
ACTN1-220ENST00000556433 MUC7Q8TAX7 377 aa17.27■□□□□ 0.36
ACTN1-220ENST00000556433 MRPS14O60783 128 aaKnown RBP17.26■□□□□ 0.35
ACTN1-220ENST00000556433 TRBV12-3P01733 135 aa17.26■□□□□ 0.35
ACTN1-220ENST00000556433 OR9G9P0C7N8 305 aa17.26■□□□□ 0.35
ACTN1-220ENST00000556433 IGHV4-30-4P0DP06 118 aa17.26■□□□□ 0.35
ACTN1-220ENST00000556433 GABARAPL2P60520 117 aa17.26■□□□□ 0.35
ACTN1-220ENST00000556433 TATDN3Q17R31 274 aa17.26■□□□□ 0.35
ACTN1-220ENST00000556433 HACD4Q5VWC8 232 aa17.26■□□□□ 0.35
ACTN1-220ENST00000556433 IL34Q6ZMJ4 242 aa17.26■□□□□ 0.35
ACTN1-220ENST00000556433 SGPP2Q8IWX5 399 aa17.26■□□□□ 0.35
ACTN1-220ENST00000556433 ADAD2Q8NCV1 583 aaKnown RBP17.26■□□□□ 0.35
ACTN1-220ENST00000556433 SRSF12Q8WXF0 261 aaKnown RBP17.26■□□□□ 0.35
ACTN1-220ENST00000556433 ACOT12Q8WYK0 555 aa17.26■□□□□ 0.35
ACTN1-220ENST00000556433 DCUN1D5Q9BTE7 237 aa17.26■□□□□ 0.35
ACTN1-220ENST00000556433 TXNL4BQ9NX01 149 aaKnown RBP17.26■□□□□ 0.35
ACTN1-220ENST00000556433 TNCP24821 2201 aa17.26■□□□□ 0.35
ACTN1-220ENST00000556433 NOTOA8MTQ0 251 aa17.25■□□□□ 0.35
ACTN1-220ENST00000556433 CTXN2P0C2S0 81 aa17.25■□□□□ 0.35
ACTN1-220ENST00000556433 PSMB9P28065 219 aa17.25■□□□□ 0.35
ACTN1-220ENST00000556433 UBE2UQ5VVX9 321 aa17.25■□□□□ 0.35
ACTN1-220ENST00000556433 ZNF645Q8N7E2 425 aa17.25■□□□□ 0.35
ACTN1-220ENST00000556433 ADAM30Q9UKF2 790 aa17.25■□□□□ 0.35
ACTN1-220ENST00000556433 OR2W1Q9Y3N9 320 aa17.25■□□□□ 0.35
ACTN1-220ENST00000556433 H0Y980 276 aa17.24■□□□□ 0.35
ACTN1-220ENST00000556433 FCGR3BO75015 233 aa17.24■□□□□ 0.35
ACTN1-220ENST00000556433 RBMXL2O75526 392 aaKnown RBP17.24■□□□□ 0.35
ACTN1-220ENST00000556433 ACTL6BO94805 426 aa17.24■□□□□ 0.35
ACTN1-220ENST00000556433 NFYAP23511 347 aaPredicted RBP17.24■□□□□ 0.35
ACTN1-220ENST00000556433 FGF9P31371 208 aaPredicted RBP17.24■□□□□ 0.35
ACTN1-220ENST00000556433 RPEL1Q2QD12 228 aa17.24■□□□□ 0.35
ACTN1-220ENST00000556433 SNAPC3Q92966 411 aa17.24■□□□□ 0.35
ACTN1-220ENST00000556433 DCSTAMPQ9H295 470 aa17.24■□□□□ 0.35
ACTN1-220ENST00000556433 ZNF430Q9H8G1 570 aaPredicted RBP17.24■□□□□ 0.35
ACTN1-220ENST00000556433 C19orf73Q9NVV2 129 aa17.24■□□□□ 0.35
ACTN1-220ENST00000556433 TUSC2O75896 110 aa17.23■□□□□ 0.35
ACTN1-220ENST00000556433 HLA-DQB1P01920 261 aa17.23■□□□□ 0.35
ACTN1-220ENST00000556433 CSN3P07498 182 aa17.23■□□□□ 0.35
ACTN1-220ENST00000556433 SAA1P0DJI8 122 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms