RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 NIT1Q86X76 327 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 SLC30A8Q8IWU4 369 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 ZSCAN4Q8NAM6 433 aaPredicted RBP3.07□□□□□ -1.92
PRPF39-209ENST00000556353 NEIL3Q8TAT5 605 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 LINC01560Q8TB33 94 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 RNASEH2CQ8TDP1 164 aaKnown RBP3.07□□□□□ -1.92
PRPF39-209ENST00000556353 ISOC2Q96AB3 205 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 PYURFQ96I23 114 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 ZNF75AQ96N20 296 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 OR2M2Q96R28 347 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 MBOAT4Q96T53 435 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 FOXC2Q99958 501 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 OSBPL11Q9BXB4 747 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 UGT2B28Q9BY64 529 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 SLC25A39Q9BZJ4 359 aaPredicted RBP3.07□□□□□ -1.92
PRPF39-209ENST00000556353 NXF5Q9H1B4 397 aaKnown RBP3.07□□□□□ -1.92
PRPF39-209ENST00000556353 RPF2Q9H7B2 306 aaKnown RBP3.07□□□□□ -1.92
PRPF39-209ENST00000556353 CXorf21Q9HAI6 301 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 TMEM27Q9HBJ8 222 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 WFDC1Q9HC57 220 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 KCNJ16Q9NPI9 418 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 CYTL1Q9NRR1 136 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 CLN6Q9NWW5 311 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 CLCF1Q9UBD9 225 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 PCTPQ9UKL6 214 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 CES1P1Q9UKY3 287 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 BAIAP2Q9UQB8 552 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 UTP11Q9Y3A2 253 aaKnown RBP3.07□□□□□ -1.92
PRPF39-209ENST00000556353 RNF11Q9Y3C5 154 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 HSPE1-MOB4S4R3N1 261 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 ARHGAP32A7KAX9 2087 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 DYSFO75923 2080 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 KIR2DL5BA0A0G2JN68 375 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 KIR2DL5BA0A0G2JPC4 375 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 SLC22A20A6NK97 555 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 DEFB108AA8MXU0 73 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 SIRPB1O00241 398 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 GPR31O00270 319 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 SSNA1O43805 119 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 PDE6DO43924 150 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 SLC16A7O60669 478 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 TNFSF13O75888 250 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 RAB36O95755 333 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 GPR75O95800 540 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 EPPINO95925 133 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 HAND1O96004 215 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 IGF2P01344 180 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 P04436 131 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 IFNW1P05000 195 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 OR8U8P0C7N1 319 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 CD99P14209 185 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 CPMP14384 443 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 UQCRBP14927 111 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 HIST1H1BP16401 226 aaKnown RBP3.06□□□□□ -1.92
PRPF39-209ENST00000556353 KITLGP21583 273 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 CXCR1P25024 350 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 GCAP28676 217 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 FMO3P31513 532 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 OPRM1P35372 400 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 DDOSTP39656 456 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 VHLP40337 213 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 LHX2P50458 406 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 EFNB2P52799 333 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 TAS2R41P59536 307 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 GNG11P61952 73 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 MRPS10P82664 201 aaKnown RBP3.06□□□□□ -1.92
PRPF39-209ENST00000556353 ZNF616Q08AN1 781 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 EXOSC2Q13868 293 aaKnown RBP3.06□□□□□ -1.92
PRPF39-209ENST00000556353 OR8G1Q15617 311 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 PRSS8Q16651 343 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 PLPPR5Q32ZL2 321 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 SPIN4Q56A73 249 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 SAMD13Q5VXD3 122 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 LIPKQ5VXJ0 399 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 OPN5Q6U736 354 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 COMMD6Q7Z4G1 85 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 KIR2DL5AQ8N109 375 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 C4orf33Q8N1A6 199 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 C12orf45Q8N5I9 185 aaPredicted RBP3.06□□□□□ -1.92
PRPF39-209ENST00000556353 ACBD7Q8N6N7 88 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 SDR9C7Q8NEX9 313 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 NOXO1Q8NFA2 376 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 SLC26A10Q8NG04 563 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 OR1L6Q8NGR2 347 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 OR8U1Q8NH10 309 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 KIR2DL5BQ8NHK3 375 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 RNASE6Q93091 150 aaKnown RBP3.06□□□□□ -1.92
PRPF39-209ENST00000556353 RPEQ96AT9 228 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 RAB39BQ96DA2 213 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 SMIM19Q96E16 107 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 PELI1Q96FA3 418 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 CMTM7Q96FZ5 175 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 ITCHQ96J02 903 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 OR10C1Q96KK4 312 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 ZNF681Q96N22 645 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 DOK1Q99704 481 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 ARHGDIGQ99819 225 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 DOHHQ9BU89 302 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 TBL1XR1Q9BZK7 514 aa3.06□□□□□ -1.92
PRPF39-209ENST00000556353 ARL6Q9H0F7 186 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms