RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 PEMTQ9UBM1 199 aa8.08□□□□□ -1.12
SYNE2-221ENST00000556342 ZNF221Q9UK13 617 aa8.08□□□□□ -1.12
SYNE2-221ENST00000556342 A0A0B4J203 849 aa8.07□□□□□ -1.12
SYNE2-221ENST00000556342 M0R1X1 148 aa8.07□□□□□ -1.12
SYNE2-221ENST00000556342 AIREO43918 545 aa8.07□□□□□ -1.12
SYNE2-221ENST00000556342 CD1AP06126 327 aa8.07□□□□□ -1.12
SYNE2-221ENST00000556342 CELP19835 753 aa8.07□□□□□ -1.12
SYNE2-221ENST00000556342 MAPK3P27361 379 aaPredicted RBP8.07□□□□□ -1.12
SYNE2-221ENST00000556342 SRSF3P84103 164 aaKnown RBP8.07□□□□□ -1.12
SYNE2-221ENST00000556342 UNC119Q13432 240 aa8.07□□□□□ -1.12
SYNE2-221ENST00000556342 KIR3DS1Q14943 382 aa8.07□□□□□ -1.12
SYNE2-221ENST00000556342 C1orf100Q5SVJ3 147 aa8.07□□□□□ -1.12
SYNE2-221ENST00000556342 ZNF555Q8NEP9 628 aa8.07□□□□□ -1.12
SYNE2-221ENST00000556342 KCNG3Q8TAE7 436 aa8.07□□□□□ -1.12
SYNE2-221ENST00000556342 THRSPQ92748 146 aa8.07□□□□□ -1.12
SYNE2-221ENST00000556342 HARBI1Q96MB7 349 aa8.07□□□□□ -1.12
SYNE2-221ENST00000556342 HDHD3Q9BSH5 251 aaPredicted RBP8.07□□□□□ -1.12
SYNE2-221ENST00000556342 KCNK15Q9H427 330 aa8.07□□□□□ -1.12
SYNE2-221ENST00000556342 SLC35D1Q9NTN3 355 aa8.07□□□□□ -1.12
SYNE2-221ENST00000556342 A0A0A6YYD4 124 aa8.06□□□□□ -1.12
SYNE2-221ENST00000556342 EFCAB10A6NFE3 127 aa8.06□□□□□ -1.12
SYNE2-221ENST00000556342 TMEM14DPA8MWL7 114 aa8.06□□□□□ -1.12
SYNE2-221ENST00000556342 OR11H12B2RN74 326 aa8.06□□□□□ -1.12
SYNE2-221ENST00000556342 BMPR1BO00238 502 aa8.06□□□□□ -1.12
SYNE2-221ENST00000556342 LY6G6CO95867 125 aa8.06□□□□□ -1.12
SYNE2-221ENST00000556342 SCTP09683 121 aa8.06□□□□□ -1.12
SYNE2-221ENST00000556342 APELAP0DMC3 54 aa8.06□□□□□ -1.12
SYNE2-221ENST00000556342 INSL4Q14641 139 aa8.06□□□□□ -1.12
SYNE2-221ENST00000556342 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.06□□□□□ -1.12
SYNE2-221ENST00000556342 ADAD2Q8NCV1 583 aaKnown RBP8.06□□□□□ -1.12
SYNE2-221ENST00000556342 DYNLRB2Q8TF09 96 aa8.06□□□□□ -1.12
SYNE2-221ENST00000556342 GGHQ92820 318 aa8.06□□□□□ -1.12
SYNE2-221ENST00000556342 Q9N2K0 584 aa8.06□□□□□ -1.12
SYNE2-221ENST00000556342 SMPD3Q9NY59 655 aaPredicted RBP8.06□□□□□ -1.12
SYNE2-221ENST00000556342 ZNF230Q9UIE0 474 aaPredicted RBP8.06□□□□□ -1.12
SYNE2-221ENST00000556342 AK3Q9UIJ7 227 aa8.06□□□□□ -1.12
SYNE2-221ENST00000556342 MGAT4AQ9UM21 535 aa8.06□□□□□ -1.12
SYNE2-221ENST00000556342 IGKV1-6A0A0C4DH72 117 aa8.05□□□□□ -1.12
SYNE2-221ENST00000556342 MSGN1A6NI15 193 aa8.05□□□□□ -1.12
SYNE2-221ENST00000556342 FAM223BA6NKX1 122 aa8.05□□□□□ -1.12
SYNE2-221ENST00000556342 SRRM4A7MD48 611 aaKnown RBP8.05□□□□□ -1.12
SYNE2-221ENST00000556342 OR9G9P0C7N8 305 aa8.05□□□□□ -1.12
SYNE2-221ENST00000556342 QRFPP83859 136 aa8.05□□□□□ -1.12
SYNE2-221ENST00000556342 RHOGP84095 191 aa8.05□□□□□ -1.12
SYNE2-221ENST00000556342 ST3GAL4Q11206 333 aa8.05□□□□□ -1.12
SYNE2-221ENST00000556342 EXOSC2Q13868 293 aaKnown RBP8.05□□□□□ -1.12
SYNE2-221ENST00000556342 GUCA2BQ16661 112 aa8.05□□□□□ -1.12
SYNE2-221ENST00000556342 MRGPRG-AS1Q2M3A8 158 aa8.05□□□□□ -1.12
SYNE2-221ENST00000556342 DEFB114Q30KQ6 69 aa8.05□□□□□ -1.12
SYNE2-221ENST00000556342 GLT8D1Q68CQ7 371 aa8.05□□□□□ -1.12
SYNE2-221ENST00000556342 LRRTM1Q86UE6 522 aa8.05□□□□□ -1.12
SYNE2-221ENST00000556342 FAM223AQ8IWN6 122 aa8.05□□□□□ -1.12
SYNE2-221ENST00000556342 PQLC1Q8N2U9 271 aa8.05□□□□□ -1.12
SYNE2-221ENST00000556342 PHB2Q99623 299 aa8.05□□□□□ -1.12
SYNE2-221ENST00000556342 ST6GALNAC5Q9BVH7 336 aa8.05□□□□□ -1.12
SYNE2-221ENST00000556342 AKIP1Q9NQ31 210 aa8.05□□□□□ -1.12
SYNE2-221ENST00000556342 C12orf4Q9NQ89 552 aa8.05□□□□□ -1.12
SYNE2-221ENST00000556342 ZC4H2Q9NQZ6 224 aa8.05□□□□□ -1.12
SYNE2-221ENST00000556342 RDH8Q9NYR8 311 aa8.05□□□□□ -1.12
SYNE2-221ENST00000556342 KMT2AQ03164 3969 aa8.04□□□□□ -1.12
SYNE2-221ENST00000556342 MYL12BO14950 172 aa8.04□□□□□ -1.12
SYNE2-221ENST00000556342 SOCS1O15524 211 aa8.04□□□□□ -1.12
SYNE2-221ENST00000556342 SRMP19623 302 aa8.04□□□□□ -1.12
SYNE2-221ENST00000556342 WNT4P56705 351 aa8.04□□□□□ -1.12
SYNE2-221ENST00000556342 ACSM3Q53FZ2 586 aa8.04□□□□□ -1.12
SYNE2-221ENST00000556342 TMEM177Q53S58 311 aa8.04□□□□□ -1.12
SYNE2-221ENST00000556342 RBM48Q5RL73 367 aaKnown RBP8.04□□□□□ -1.12
SYNE2-221ENST00000556342 TTC23Q5W5X9 447 aa8.04□□□□□ -1.12
SYNE2-221ENST00000556342 PHYHIPQ92561 330 aa8.04□□□□□ -1.12
SYNE2-221ENST00000556342 URM1Q9BTM9 101 aaKnown RBP8.04□□□□□ -1.12
SYNE2-221ENST00000556342 LPAR5Q9H1C0 372 aa8.04□□□□□ -1.12
SYNE2-221ENST00000556342 OR2D2Q9H210 308 aa8.04□□□□□ -1.12
SYNE2-221ENST00000556342 HSF4Q9ULV5 492 aa8.04□□□□□ -1.12
SYNE2-221ENST00000556342 PCLOQ9Y6V0 5065 aa8.04□□□□□ -1.12
SYNE2-221ENST00000556342 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.03□□□□□ -1.12
SYNE2-221ENST00000556342 TRBV9A0A0B4J1U6 114 aa8.03□□□□□ -1.12
SYNE2-221ENST00000556342 CXorf65A6NEN9 183 aa8.03□□□□□ -1.12
SYNE2-221ENST00000556342 C2orf70A6NJV1 201 aa8.03□□□□□ -1.12
SYNE2-221ENST00000556342 FOXI3A8MTJ6 420 aaPredicted RBP8.03□□□□□ -1.12
SYNE2-221ENST00000556342 TRDCB7Z8K6 153 aa8.03□□□□□ -1.12
SYNE2-221ENST00000556342 MPPED1O15442 326 aa8.03□□□□□ -1.12
SYNE2-221ENST00000556342 TUSC2O75896 110 aa8.03□□□□□ -1.12
SYNE2-221ENST00000556342 PRH1P02810 166 aa8.03□□□□□ -1.12
SYNE2-221ENST00000556342 FOLR2P14207 255 aa8.03□□□□□ -1.12
SYNE2-221ENST00000556342 ATF4P18848 351 aaPredicted RBP8.03□□□□□ -1.12
SYNE2-221ENST00000556342 EDN2P20800 178 aa8.03□□□□□ -1.12
SYNE2-221ENST00000556342 KIR2DS2P43631 304 aa8.03□□□□□ -1.12
SYNE2-221ENST00000556342 SERPINB10P48595 397 aa8.03□□□□□ -1.12
SYNE2-221ENST00000556342 ZNF45Q02386 682 aa8.03□□□□□ -1.12
SYNE2-221ENST00000556342 ATP5G2Q06055 141 aa8.03□□□□□ -1.12
SYNE2-221ENST00000556342 CBX3Q13185 183 aa8.03□□□□□ -1.12
SYNE2-221ENST00000556342 PMS2P11Q13670 270 aa8.03□□□□□ -1.12
SYNE2-221ENST00000556342 TNXAQ16473 311 aa8.03□□□□□ -1.12
SYNE2-221ENST00000556342 RTL8BQ17RB0 113 aa8.03□□□□□ -1.12
SYNE2-221ENST00000556342 C10orf67Q8IYJ2 551 aa8.03□□□□□ -1.12
SYNE2-221ENST00000556342 FAM89BQ8N5H3 189 aa8.03□□□□□ -1.12
SYNE2-221ENST00000556342 OR6M1Q8NGM8 313 aa8.03□□□□□ -1.12
SYNE2-221ENST00000556342 SRSF12Q8WXF0 261 aaKnown RBP8.03□□□□□ -1.12
SYNE2-221ENST00000556342 DDB2Q92466 427 aa8.03□□□□□ -1.12
SYNE2-221ENST00000556342 C5orf30Q96GV9 206 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms