RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 TEX13DA0A0J9YY54 714 aaPredicted RBP6.11□□□□□ -1.43
TDP1-214ENST00000556063 FAM181BA6NEQ2 426 aa6.11□□□□□ -1.43
TDP1-214ENST00000556063 SHOXO15266 292 aa6.11□□□□□ -1.43
TDP1-214ENST00000556063 MPPED1O15442 326 aa6.11□□□□□ -1.43
TDP1-214ENST00000556063 NBR2O15453 112 aa6.11□□□□□ -1.43
TDP1-214ENST00000556063 RBFOX2O43251 390 aaKnown RBP eCLIP6.11□□□□□ -1.43
TDP1-214ENST00000556063 FGF16O43320 207 aa6.11□□□□□ -1.43
TDP1-214ENST00000556063 LYRM1O43325 122 aa6.11□□□□□ -1.43
TDP1-214ENST00000556063 CREBL2O60519 120 aaPredicted RBP6.11□□□□□ -1.43
TDP1-214ENST00000556063 FCGR3BO75015 233 aa6.11□□□□□ -1.43
TDP1-214ENST00000556063 ATG12O94817 140 aa6.11□□□□□ -1.43
TDP1-214ENST00000556063 SPDEFO95238 335 aa6.11□□□□□ -1.43
TDP1-214ENST00000556063 HRASP01112 189 aa6.11□□□□□ -1.43
TDP1-214ENST00000556063 IGLV2-14P01704 120 aa6.11□□□□□ -1.43
TDP1-214ENST00000556063 RLN1P04808 185 aa6.11□□□□□ -1.43
TDP1-214ENST00000556063 PIGPP57054 158 aa6.11□□□□□ -1.43
TDP1-214ENST00000556063 PLGLAQ15195 96 aa6.11□□□□□ -1.43
TDP1-214ENST00000556063 MMDQ15546 238 aa6.11□□□□□ -1.43
TDP1-214ENST00000556063 VMA21Q3ZAQ7 101 aa6.11□□□□□ -1.43
TDP1-214ENST00000556063 ARSJQ5FYB0 599 aaPredicted RBP6.11□□□□□ -1.43
TDP1-214ENST00000556063 TMEM219Q86XT9 240 aa6.11□□□□□ -1.43
TDP1-214ENST00000556063 SGPP2Q8IWX5 399 aa6.11□□□□□ -1.43
TDP1-214ENST00000556063 SPAG16Q8N0X2 631 aa6.11□□□□□ -1.43
TDP1-214ENST00000556063 OR51H1Q8NH63 302 aa6.11□□□□□ -1.43
TDP1-214ENST00000556063 C5orf30Q96GV9 206 aa6.11□□□□□ -1.43
TDP1-214ENST00000556063 HARBI1Q96MB7 349 aa6.11□□□□□ -1.43
TDP1-214ENST00000556063 RASL11BQ9BPW5 248 aa6.11□□□□□ -1.43
TDP1-214ENST00000556063 PRSS22Q9GZN4 317 aa6.11□□□□□ -1.43
TDP1-214ENST00000556063 RANBP3Q9H6Z4 567 aaPredicted RBP6.11□□□□□ -1.43
TDP1-214ENST00000556063 SLC2A9Q9NRM0 540 aa6.11□□□□□ -1.43
TDP1-214ENST00000556063 FAM212BQ9NTI7 297 aaPredicted RBP6.11□□□□□ -1.43
TDP1-214ENST00000556063 GPR132Q9UNW8 380 aa6.11□□□□□ -1.43
TDP1-214ENST00000556063 KCNIP3Q9Y2W7 256 aa6.11□□□□□ -1.43
TDP1-214ENST00000556063 TNCP24821 2201 aa6.11□□□□□ -1.43
TDP1-214ENST00000556063 AKAP9Q99996 3911 aa6.1□□□□□ -1.43
TDP1-214ENST00000556063 PLXNB1O43157 2135 aa6.1□□□□□ -1.43
TDP1-214ENST00000556063 A0A1B0GUS0 222 aa6.1□□□□□ -1.43
TDP1-214ENST00000556063 FAM240BA0A1B0GVZ2 78 aa6.1□□□□□ -1.43
TDP1-214ENST00000556063 LINC00473A8K010 186 aa6.1□□□□□ -1.43
TDP1-214ENST00000556063 RRHO14718 337 aa6.1□□□□□ -1.43
TDP1-214ENST00000556063 NDUFB6O95139 128 aa6.1□□□□□ -1.43
TDP1-214ENST00000556063 CRYZL1O95825 349 aa6.1□□□□□ -1.43
TDP1-214ENST00000556063 HPRT1P00492 218 aa6.1□□□□□ -1.43
TDP1-214ENST00000556063 SERPINE2P07093 398 aa6.1□□□□□ -1.43
TDP1-214ENST00000556063 ANXA3P12429 323 aa6.1□□□□□ -1.43
TDP1-214ENST00000556063 RPA2P15927 270 aa6.1□□□□□ -1.43
TDP1-214ENST00000556063 PI3P19957 117 aa6.1□□□□□ -1.43
TDP1-214ENST00000556063 F2RP25116 425 aa6.1□□□□□ -1.43
TDP1-214ENST00000556063 TAS2R31P59538 309 aa6.1□□□□□ -1.43
TDP1-214ENST00000556063 ERVK-16P61578 105 aa6.1□□□□□ -1.43
TDP1-214ENST00000556063 RPL30P62888 115 aaKnown RBP6.1□□□□□ -1.43
TDP1-214ENST00000556063 ASAH1Q13510 395 aa6.1□□□□□ -1.43
TDP1-214ENST00000556063 EIF4EBP1Q13541 118 aaPredicted RBP6.1□□□□□ -1.43
TDP1-214ENST00000556063 TMEM177Q53S58 311 aa6.1□□□□□ -1.43
TDP1-214ENST00000556063 OR2B11Q5JQS5 317 aa6.1□□□□□ -1.43
TDP1-214ENST00000556063 CCBE1Q6UXH8 406 aaPredicted RBP6.1□□□□□ -1.43
TDP1-214ENST00000556063 TBC1D26Q86UD7 250 aa6.1□□□□□ -1.43
TDP1-214ENST00000556063 CENPSQ8N2Z9 138 aa6.1□□□□□ -1.43
TDP1-214ENST00000556063 Q8N6K4 173 aa6.1□□□□□ -1.43
TDP1-214ENST00000556063 NPBQ8NG41 125 aa6.1□□□□□ -1.43
TDP1-214ENST00000556063 OR4F5Q8NH21 305 aa6.1□□□□□ -1.43
TDP1-214ENST00000556063 OR2T6Q8NHC8 308 aa6.1□□□□□ -1.43
TDP1-214ENST00000556063 VSTM2AQ8TAG5 236 aa6.1□□□□□ -1.43
TDP1-214ENST00000556063 TMEM158Q8WZ71 300 aa6.1□□□□□ -1.43
TDP1-214ENST00000556063 DDB2Q92466 427 aa6.1□□□□□ -1.43
TDP1-214ENST00000556063 PLEKHA2Q9HB19 425 aa6.1□□□□□ -1.43
TDP1-214ENST00000556063 COMMD9Q9P000 198 aa6.1□□□□□ -1.43
TDP1-214ENST00000556063 C3orf85A0A1B0GTC6 90 aa6.09□□□□□ -1.43
TDP1-214ENST00000556063 H0Y980 276 aa6.09□□□□□ -1.43
TDP1-214ENST00000556063 PLA2G10O15496 165 aa6.09□□□□□ -1.43
TDP1-214ENST00000556063 KCNAB3O43448 404 aa6.09□□□□□ -1.43
TDP1-214ENST00000556063 CHST1O43916 411 aa6.09□□□□□ -1.43
TDP1-214ENST00000556063 PEX14O75381 377 aa6.09□□□□□ -1.43
TDP1-214ENST00000556063 ACTL6BO94805 426 aa6.09□□□□□ -1.43
TDP1-214ENST00000556063 NDUFA7O95182 113 aa6.09□□□□□ -1.43
TDP1-214ENST00000556063 IGKV1-16P04430 117 aa6.09□□□□□ -1.43
TDP1-214ENST00000556063 HKR1P10072 659 aa6.09□□□□□ -1.43
TDP1-214ENST00000556063 NQO2P16083 231 aa6.09□□□□□ -1.43
TDP1-214ENST00000556063 LPAR6P43657 344 aa6.09□□□□□ -1.43
TDP1-214ENST00000556063 LINC00205P59089 165 aa6.09□□□□□ -1.43
TDP1-214ENST00000556063 UBE2MP61081 183 aaKnown RBP6.09□□□□□ -1.43
TDP1-214ENST00000556063 UBE2KP61086 200 aa6.09□□□□□ -1.43
TDP1-214ENST00000556063 SRPXP78539 464 aa6.09□□□□□ -1.43
TDP1-214ENST00000556063 DHODHQ02127 395 aa6.09□□□□□ -1.43
TDP1-214ENST00000556063 FOXL1Q12952 345 aa6.09□□□□□ -1.43
TDP1-214ENST00000556063 C5orf64Q2M2E5 130 aa6.09□□□□□ -1.43
TDP1-214ENST00000556063 TRIM16LQ309B1 348 aa6.09□□□□□ -1.43
TDP1-214ENST00000556063 TMEM128Q5BJH2 165 aa6.09□□□□□ -1.43
TDP1-214ENST00000556063 C9orf152Q5JTZ5 239 aa6.09□□□□□ -1.43
TDP1-214ENST00000556063 LIN54Q6MZP7 749 aa6.09□□□□□ -1.43
TDP1-214ENST00000556063 TMED4Q7Z7H5 227 aa6.09□□□□□ -1.43
TDP1-214ENST00000556063 PRIMA1Q86XR5 153 aa6.09□□□□□ -1.43
TDP1-214ENST00000556063 C5orf56Q8N8D9 126 aa6.09□□□□□ -1.43
TDP1-214ENST00000556063 TEX45Q8NA69 505 aa6.09□□□□□ -1.43
TDP1-214ENST00000556063 ENKURQ8TC29 256 aa6.09□□□□□ -1.43
TDP1-214ENST00000556063 GPHA2Q96T91 129 aa6.09□□□□□ -1.43
TDP1-214ENST00000556063 RTBDNQ9BSG5 229 aaPredicted RBP6.09□□□□□ -1.43
TDP1-214ENST00000556063 C5orf66Q9H5L9 145 aa6.09□□□□□ -1.43
TDP1-214ENST00000556063 NAA60Q9H7X0 242 aa6.09□□□□□ -1.43
TDP1-214ENST00000556063 BEX1Q9HBH7 125 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms