RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 CTLA4P16410 223 aa2.72□□□□□ -1.97
VRK1-205ENST00000555402 DDTP30046 118 aa2.72□□□□□ -1.97
VRK1-205ENST00000555402 GABRA3P34903 492 aa2.72□□□□□ -1.97
VRK1-205ENST00000555402 MAP2K4P45985 399 aa2.72□□□□□ -1.97
VRK1-205ENST00000555402 MARCKSL1P49006 195 aa2.72□□□□□ -1.97
VRK1-205ENST00000555402 CRYBA4P53673 196 aa2.72□□□□□ -1.97
VRK1-205ENST00000555402 TAS2R41P59536 307 aa2.72□□□□□ -1.97
VRK1-205ENST00000555402 SNAP25P60880 206 aa2.72□□□□□ -1.97
VRK1-205ENST00000555402 DAD1P61803 113 aa2.72□□□□□ -1.97
VRK1-205ENST00000555402 HLA-DRB3P79483 266 aa2.72□□□□□ -1.97
VRK1-205ENST00000555402 S100A12P80511 92 aa2.72□□□□□ -1.97
VRK1-205ENST00000555402 PRDX4Q13162 271 aa2.72□□□□□ -1.97
VRK1-205ENST00000555402 CDK10Q15131 360 aa2.72□□□□□ -1.97
VRK1-205ENST00000555402 BATFQ16520 125 aa2.72□□□□□ -1.97
VRK1-205ENST00000555402 ARHGAP11BQ3KRB8 267 aa2.72□□□□□ -1.97
VRK1-205ENST00000555402 PYCR3Q53H96 274 aa2.72□□□□□ -1.97
VRK1-205ENST00000555402 SPATA31E1Q6ZUB1 1445 aa2.72□□□□□ -1.97
VRK1-205ENST00000555402 GLT6D1Q7Z4J2 308 aa2.72□□□□□ -1.97
VRK1-205ENST00000555402 ATP5L2Q7Z4Y8 100 aa2.72□□□□□ -1.97
VRK1-205ENST00000555402 KRTCAP2Q8N6L1 136 aa2.72□□□□□ -1.97
VRK1-205ENST00000555402 UBL4BQ8N7F7 174 aa2.72□□□□□ -1.97
VRK1-205ENST00000555402 OR5K1Q8NHB7 308 aa2.72□□□□□ -1.97
VRK1-205ENST00000555402 RASSF5Q8WWW0 418 aa2.72□□□□□ -1.97
VRK1-205ENST00000555402 GALMQ96C23 342 aa2.72□□□□□ -1.97
VRK1-205ENST00000555402 DCUN1D1Q96GG9 259 aa2.72□□□□□ -1.97
VRK1-205ENST00000555402 GNB1LQ9BYB4 327 aa2.72□□□□□ -1.97
VRK1-205ENST00000555402 ALX4Q9H161 411 aaPredicted RBP2.72□□□□□ -1.97
VRK1-205ENST00000555402 OPTCQ9UBM4 332 aa2.72□□□□□ -1.97
VRK1-205ENST00000555402 OR5V1Q9UGF6 321 aa2.72□□□□□ -1.97
VRK1-205ENST00000555402 MCTS1Q9ULC4 181 aaKnown RBP2.72□□□□□ -1.97
VRK1-205ENST00000555402 ZNF443Q9Y2A4 671 aaPredicted RBP2.72□□□□□ -1.97
VRK1-205ENST00000555402 KIF15Q9NS87 1388 aa2.72□□□□□ -1.97
VRK1-205ENST00000555402 TRBV24-1A0A075B6N3 115 aa2.71□□□□□ -1.98
VRK1-205ENST00000555402 FUOMA2VDF0 154 aa2.71□□□□□ -1.98
VRK1-205ENST00000555402 FAM159BA6NKW6 160 aa2.71□□□□□ -1.98
VRK1-205ENST00000555402 EEF1E1-BLOC1S5C9J1V9 151 aa2.71□□□□□ -1.98
VRK1-205ENST00000555402 FBP1P09467 338 aa2.71□□□□□ -1.98
VRK1-205ENST00000555402 RPL5P46777 297 aaKnown RBP2.71□□□□□ -1.98
VRK1-205ENST00000555402 GZMMP51124 257 aa2.71□□□□□ -1.98
VRK1-205ENST00000555402 RPS24P62847 133 aaKnown RBP2.71□□□□□ -1.98
VRK1-205ENST00000555402 TFAMQ00059 246 aaKnown RBP2.71□□□□□ -1.98
VRK1-205ENST00000555402 RUNX1Q01196 453 aa2.71□□□□□ -1.98
VRK1-205ENST00000555402 APOFQ13790 326 aa2.71□□□□□ -1.98
VRK1-205ENST00000555402 ACOT6Q3I5F7 207 aaPredicted RBP2.71□□□□□ -1.98
VRK1-205ENST00000555402 HENMT1Q5T8I9 393 aaKnown RBP2.71□□□□□ -1.98
VRK1-205ENST00000555402 LCN8Q6JVE9 175 aa2.71□□□□□ -1.98
VRK1-205ENST00000555402 BRD3OSQ6XYD6 125 aa2.71□□□□□ -1.98
VRK1-205ENST00000555402 ZNF550Q7Z398 422 aa2.71□□□□□ -1.98
VRK1-205ENST00000555402 SLC35F6Q8N357 371 aa2.71□□□□□ -1.98
VRK1-205ENST00000555402 JOSD2Q8TAC2 188 aa2.71□□□□□ -1.98
VRK1-205ENST00000555402 DYDC1Q8WWB3 177 aa2.71□□□□□ -1.98
VRK1-205ENST00000555402 HIST1H2BAQ96A08 127 aa2.71□□□□□ -1.98
VRK1-205ENST00000555402 ACY3Q96HD9 319 aa2.71□□□□□ -1.98
VRK1-205ENST00000555402 ANKRD36BP1Q96IX9 119 aa2.71□□□□□ -1.98
VRK1-205ENST00000555402 SLC35G5Q96KT7 338 aa2.71□□□□□ -1.98
VRK1-205ENST00000555402 B9D2Q9BPU9 175 aa2.71□□□□□ -1.98
VRK1-205ENST00000555402 DDA1Q9BW61 102 aa2.71□□□□□ -1.98
VRK1-205ENST00000555402 EIF5A2Q9GZV4 153 aaKnown RBP2.71□□□□□ -1.98
VRK1-205ENST00000555402 BATF3Q9NR55 127 aa2.71□□□□□ -1.98
VRK1-205ENST00000555402 TAS2R7Q9NYW3 318 aa2.71□□□□□ -1.98
VRK1-205ENST00000555402 IDI2-AS1Q9NZ38 188 aa2.71□□□□□ -1.98
VRK1-205ENST00000555402 PKIGQ9Y2B9 76 aa2.71□□□□□ -1.98
VRK1-205ENST00000555402 PRR14LQ5THK1 2151 aa2.71□□□□□ -1.98
VRK1-205ENST00000555402 TRIOBPQ9H2D6 2365 aa2.71□□□□□ -1.98
VRK1-205ENST00000555402 MYO5BQ9ULV0 1848 aa2.7□□□□□ -1.98
VRK1-205ENST00000555402 PLCH2O75038 1416 aa2.7□□□□□ -1.98
VRK1-205ENST00000555402 NPATQ14207 1427 aa2.7□□□□□ -1.98
VRK1-205ENST00000555402 ARAP3Q8WWN8 1544 aa2.7□□□□□ -1.98
VRK1-205ENST00000555402 OR6C6A6NF89 314 aa2.7□□□□□ -1.98
VRK1-205ENST00000555402 SH2D1AO60880 128 aa2.7□□□□□ -1.98
VRK1-205ENST00000555402 STK16O75716 305 aa2.7□□□□□ -1.98
VRK1-205ENST00000555402 OR7C1O76099 320 aaPredicted RBP2.7□□□□□ -1.98
VRK1-205ENST00000555402 ATG12O94817 140 aa2.7□□□□□ -1.98
VRK1-205ENST00000555402 IFNA21P01568 189 aa2.7□□□□□ -1.98
VRK1-205ENST00000555402 OR13C7P0DN81 318 aa2.7□□□□□ -1.98
VRK1-205ENST00000555402 ESDP10768 282 aa2.7□□□□□ -1.98
VRK1-205ENST00000555402 CYBAP13498 195 aa2.7□□□□□ -1.98
VRK1-205ENST00000555402 OR1E2P47887 323 aa2.7□□□□□ -1.98
VRK1-205ENST00000555402 HIST1H3AP68431 136 aa2.7□□□□□ -1.98
VRK1-205ENST00000555402 H3F3AP84243 136 aa2.7□□□□□ -1.98
VRK1-205ENST00000555402 TMEM267Q0VDI3 215 aaPredicted RBP2.7□□□□□ -1.98
VRK1-205ENST00000555402 DHRS2Q13268 280 aa2.7□□□□□ -1.98
VRK1-205ENST00000555402 PMAIP1Q13794 54 aa2.7□□□□□ -1.98
VRK1-205ENST00000555402 FAM78BQ5VT40 261 aa2.7□□□□□ -1.98
VRK1-205ENST00000555402 C3orf33Q6P1S2 294 aa2.7□□□□□ -1.98
VRK1-205ENST00000555402 ALKAL1Q6UXT8 129 aa2.7□□□□□ -1.98
VRK1-205ENST00000555402 Q6ZRU5 148 aa2.7□□□□□ -1.98
VRK1-205ENST00000555402 HIST2H3AQ71DI3 136 aa2.7□□□□□ -1.98
VRK1-205ENST00000555402 LRP11Q86VZ4 500 aa2.7□□□□□ -1.98
VRK1-205ENST00000555402 DOLPP1Q86YN1 238 aa2.7□□□□□ -1.98
VRK1-205ENST00000555402 ZNF567Q8N184 647 aa2.7□□□□□ -1.98
VRK1-205ENST00000555402 OR5P3Q8WZ94 311 aa2.7□□□□□ -1.98
VRK1-205ENST00000555402 OR7D2Q96RA2 312 aa2.7□□□□□ -1.98
VRK1-205ENST00000555402 OR52E6Q96RD3 313 aa2.7□□□□□ -1.98
VRK1-205ENST00000555402 HES4Q9HCC6 221 aa2.7□□□□□ -1.98
VRK1-205ENST00000555402 SLC23A2Q9UGH3 650 aa2.7□□□□□ -1.98
VRK1-205ENST00000555402 RPUSD1Q9UJJ7 312 aaKnown RBP2.7□□□□□ -1.98
VRK1-205ENST00000555402 SHROOM3Q8TF72 1996 aa2.7□□□□□ -1.98
VRK1-205ENST00000555402 WRNQ14191 1432 aaPredicted RBP eCLIP2.69□□□□□ -1.98
VRK1-205ENST00000555402 PSCAO43653 123 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms