RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 MOSP00540 346 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 PMP2P02689 132 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 OPN1MWP04001 364 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 FCGR3AP08637 254 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 OPN1MW2P0DN77 364 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 OPN1MW3P0DN78 364 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 NFYAP23511 347 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-231ENST00000554994 PRSS3P35030 304 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 KIR2DS4P43632 304 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 F2RL1P55085 397 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 ELLP55199 621 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-231ENST00000554994 RPS16P62249 146 aaKnown RBP3.69□□□□□ -1.82
ATXN3-231ENST00000554994 PITPNAQ00169 270 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 KIR2DS1Q14954 304 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 ARL6IP1Q15041 203 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 HMGN3Q15651 99 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 PNLIPRP3Q17RR3 467 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 TMEM95Q3KNT9 176 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 UBE2NLQ5JXB2 153 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 TMEM69Q5SWH9 247 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 HACD4Q5VWC8 232 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 ZFAND6Q6FIF0 208 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 SLC25A48Q6ZT89 311 aaKnown RBP3.69□□□□□ -1.82
ATXN3-231ENST00000554994 MOB1BQ7L9L4 216 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 ANKRD13BQ86YJ7 626 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 SNX29P2Q8IUI4 249 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 OR8H3Q8N146 312 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 KLHDC1Q8N7A1 406 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 ZBTB34Q8NCN2 500 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 OR5AU1Q8NGC0 362 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 OR4A4PQ8NGN8 299 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 OR13F1Q8NGS4 319 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 RTN4IP1Q8WWV3 396 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-231ENST00000554994 PTX4Q96A99 478 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 BCL7BQ9BQE9 202 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 PARP12Q9H0J9 701 aaKnown RBP3.69□□□□□ -1.82
ATXN3-231ENST00000554994 C16orf95Q9H693 158 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 LINC00574Q9H8X3 128 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 RDH8Q9NYR8 311 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 PIPOXQ9P0Z9 390 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 KIAA1456Q9P272 454 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 JPT1Q9UK76 154 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 SPATA2Q9UM82 520 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 KCNK7Q9Y2U2 307 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 ETV7Q9Y603 341 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 CEPT1Q9Y6K0 416 aa3.69□□□□□ -1.82
ATXN3-231ENST00000554994 IGKV1D-8A0A087WSZ0 117 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 SAA2-SAA4A0A096LPE2 208 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 TRBV6-6A0A0A6YYG2 114 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 A0A1W2PPI3 338 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 LINC01548A6NM66 108 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 FOXI3A8MTJ6 420 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-231ENST00000554994 MFNGO00587 321 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 TXNL1O43396 289 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 XRCC3O43542 346 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 LANCL1O43813 399 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 TSPAN9O75954 239 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 OR2F2O95006 317 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 CNIH1O95406 144 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 DIRAS3O95661 229 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 LY86O95711 162 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 EIF4EP06730 217 aaKnown RBP3.68□□□□□ -1.82
ATXN3-231ENST00000554994 SAA2P0DJI9 122 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-231ENST00000554994 CD28P10747 220 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 ZNF182P17025 639 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-231ENST00000554994 ELK1P19419 428 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 CNTFRP26992 372 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 CD1BP29016 333 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 MC5RP33032 325 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 DYNLT3P51808 116 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 LUMP51884 338 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-231ENST00000554994 LINC00205P59089 165 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 FXYD4P59646 89 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 KRTAP10-6P60371 365 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-231ENST00000554994 RPL15P61313 204 aaKnown RBP3.68□□□□□ -1.82
ATXN3-231ENST00000554994 TSPAN5P62079 268 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 GNB1P62873 340 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 PAX5Q02548 391 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 ZNF816Q0VGE8 651 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-231ENST00000554994 CBX3Q13185 183 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 HERPUD1Q15011 391 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 MMDQ15546 238 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 TMEM30BQ3MIR4 351 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 ZNF260Q3ZCT1 412 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 Q3ZCU0 254 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 GAGE13Q4V321 117 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 OR2B11Q5JQS5 317 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 ZNF880Q6PDB4 577 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 FAM131AQ6UXB0 335 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 C16orf82Q7Z2V1 217 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 SLC35E3Q7Z769 313 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 ZNF554Q86TJ5 538 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 ZNF329Q86UD4 541 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 GAPTQ8N292 157 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 LINC00311Q8N616 119 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 GVQW1Q8N7I0 195 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 ZNF439Q8NDP4 499 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 BEST4Q8NFU0 473 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 SECTM1Q8WVN6 248 aa3.68□□□□□ -1.82
ATXN3-231ENST00000554994 ACOT12Q8WYK0 555 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms