RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 UFSP2Q9NUQ7 469 aa14.37□□□□□ -0.11
SHOX-204ENST00000554971 KIAA1456Q9P272 454 aa14.37□□□□□ -0.11
SHOX-204ENST00000554971 RNF150Q9ULK6 438 aa14.37□□□□□ -0.11
SHOX-204ENST00000554971 PPP1R3CQ9UQK1 317 aa14.37□□□□□ -0.11
SHOX-204ENST00000554971 SONP18583 2426 aaKnown RBP14.37□□□□□ -0.11
SHOX-204ENST00000554971 ANK3Q12955 4377 aaKnown RBP14.37□□□□□ -0.11
SHOX-204ENST00000554971 IGHV4-30-2A0A087WSY4 118 aa14.37□□□□□ -0.11
SHOX-204ENST00000554971 TRAV1-1A0A0B4J248 108 aa14.37□□□□□ -0.11
SHOX-204ENST00000554971 IFNL4K9M1U5 179 aa14.37□□□□□ -0.11
SHOX-204ENST00000554971 TNFSF12O43508 249 aa14.37□□□□□ -0.11
SHOX-204ENST00000554971 IFNA5P01569 189 aa14.37□□□□□ -0.11
SHOX-204ENST00000554971 OR8U8P0C7N1 319 aa14.37□□□□□ -0.11
SHOX-204ENST00000554971 TNFRSF1AP19438 455 aa14.37□□□□□ -0.11
SHOX-204ENST00000554971 CLEC12BQ2HXU8 276 aa14.37□□□□□ -0.11
SHOX-204ENST00000554971 ZNF826PQ6ZT77 177 aa14.37□□□□□ -0.11
SHOX-204ENST00000554971 MOGAT3Q86VF5 341 aa14.37□□□□□ -0.11
SHOX-204ENST00000554971 OR51H1Q8NH63 302 aa14.37□□□□□ -0.11
SHOX-204ENST00000554971 RNASE11Q8TAA1 199 aaKnown RBP14.37□□□□□ -0.11
SHOX-204ENST00000554971 CCL17Q92583 94 aa14.37□□□□□ -0.11
SHOX-204ENST00000554971 RBMXL1Q96E39 390 aaKnown RBP14.37□□□□□ -0.11
SHOX-204ENST00000554971 PARD6GQ9BYG4 376 aaPredicted RBP14.37□□□□□ -0.11
SHOX-204ENST00000554971 OR1A1Q9P1Q5 309 aa14.37□□□□□ -0.11
SHOX-204ENST00000554971 RBM7Q9Y580 266 aaKnown RBP14.37□□□□□ -0.11
SHOX-204ENST00000554971 COLCA2A8K830 154 aa14.36□□□□□ -0.11
SHOX-204ENST00000554971 FHITP49789 147 aa14.36□□□□□ -0.11
SHOX-204ENST00000554971 AKR1C8PQ5T2L2 129 aa14.36□□□□□ -0.11
SHOX-204ENST00000554971 C10orf105Q8TEF2 133 aa14.36□□□□□ -0.11
SHOX-204ENST00000554971 FAM216AQ8WUB2 273 aa14.36□□□□□ -0.11
SHOX-204ENST00000554971 SEBOXQ9HB31 216 aaPredicted RBP14.36□□□□□ -0.11
SHOX-204ENST00000554971 BIN3Q9NQY0 253 aa14.36□□□□□ -0.11
SHOX-204ENST00000554971 NSD1Q96L73 2696 aaPredicted RBP14.36□□□□□ -0.11
SHOX-204ENST00000554971 OOEPA6NGQ2 149 aa14.35□□□□□ -0.11
SHOX-204ENST00000554971 SYNGR2O43760 224 aa14.35□□□□□ -0.11
SHOX-204ENST00000554971 GRPP07492 148 aa14.35□□□□□ -0.11
SHOX-204ENST00000554971 OMGP23515 440 aa14.35□□□□□ -0.11
SHOX-204ENST00000554971 NFYBP25208 207 aa14.35□□□□□ -0.11
SHOX-204ENST00000554971 CEACAM6P40199 344 aa14.35□□□□□ -0.11
SHOX-204ENST00000554971 RAB13P51153 203 aa14.35□□□□□ -0.11
SHOX-204ENST00000554971 PAX5Q02548 391 aa14.35□□□□□ -0.11
SHOX-204ENST00000554971 GALMQ96C23 342 aa14.35□□□□□ -0.11
SHOX-204ENST00000554971 CHODLQ9H9P2 273 aa14.35□□□□□ -0.11
SHOX-204ENST00000554971 ARHGAP32A7KAX9 2087 aa14.35□□□□□ -0.11
SHOX-204ENST00000554971 MXRA5Q9NR99 2828 aa14.35□□□□□ -0.11
SHOX-204ENST00000554971 RBFOX3A6NFN3 312 aa14.35□□□□□ -0.11
SHOX-204ENST00000554971 C3orf80F5H4A9 247 aa14.35□□□□□ -0.11
SHOX-204ENST00000554971 CST7O76096 145 aa14.35□□□□□ -0.11
SHOX-204ENST00000554971 Q8TCH9 128 aa14.35□□□□□ -0.11
SHOX-204ENST00000554971 FAM168AQ92567 244 aa14.35□□□□□ -0.11
SHOX-204ENST00000554971 Q96MF0 132 aa14.35□□□□□ -0.11
SHOX-204ENST00000554971 TMEM106BQ9NUM4 274 aa14.35□□□□□ -0.11
SHOX-204ENST00000554971 MMP24Q9Y5R2 645 aa14.35□□□□□ -0.11
SHOX-204ENST00000554971 MALRD1Q5VYJ5 2156 aa14.34□□□□□ -0.11
SHOX-204ENST00000554971 NIPBLQ6KC79 2804 aaeCLIP14.34□□□□□ -0.11
SHOX-204ENST00000554971 MEX3AA1L020 520 aaKnown RBP14.34□□□□□ -0.11
SHOX-204ENST00000554971 VWC2LB2RUY7 222 aa14.34□□□□□ -0.11
SHOX-204ENST00000554971 MT-ND4LP03901 98 aa14.34□□□□□ -0.11
SHOX-204ENST00000554971 HOXA1P49639 335 aaPredicted RBP14.34□□□□□ -0.11
SHOX-204ENST00000554971 HBG1P69891 147 aa14.34□□□□□ -0.11
SHOX-204ENST00000554971 HBG2P69892 147 aa14.34□□□□□ -0.11
SHOX-204ENST00000554971 TRAT1Q6PIZ9 186 aa14.34□□□□□ -0.11
SHOX-204ENST00000554971 CLEC2AQ6UVW9 174 aa14.34□□□□□ -0.11
SHOX-204ENST00000554971 WDR82Q6UXN9 313 aa14.34□□□□□ -0.11
SHOX-204ENST00000554971 ZNF645Q8N7E2 425 aa14.34□□□□□ -0.11
SHOX-204ENST00000554971 GPHA2Q96T91 129 aa14.34□□□□□ -0.11
SHOX-204ENST00000554971 PSMG3Q9BT73 122 aaPredicted RBP14.34□□□□□ -0.11
SHOX-204ENST00000554971 BPESC1Q9GZL8 116 aa14.34□□□□□ -0.11
SHOX-204ENST00000554971 A0A096LNT2 108 aa14.33□□□□□ -0.11
SHOX-204ENST00000554971 A0A0G2JRQ6 117 aa14.33□□□□□ -0.11
SHOX-204ENST00000554971 C7orf77A4D0Y5 90 aa14.33□□□□□ -0.11
SHOX-204ENST00000554971 CYB5R3P00387 301 aaPredicted RBP14.33□□□□□ -0.11
SHOX-204ENST00000554971 IGKV1-39P01597 117 aa14.33□□□□□ -0.11
SHOX-204ENST00000554971 IGKV1D-39P04432 117 aa14.33□□□□□ -0.11
SHOX-204ENST00000554971 PDLIM4P50479 330 aa14.33□□□□□ -0.11
SHOX-204ENST00000554971 ZNF585BQ52M93 769 aa14.33□□□□□ -0.11
SHOX-204ENST00000554971 SOHLH1Q5JUK2 328 aa14.33□□□□□ -0.11
SHOX-204ENST00000554971 FAM201AQ5SY85 155 aa14.33□□□□□ -0.11
SHOX-204ENST00000554971 SPSB3Q6PJ21 355 aa14.33□□□□□ -0.11
SHOX-204ENST00000554971 DRAM1Q8N682 238 aa14.33□□□□□ -0.11
SHOX-204ENST00000554971 RXFP4Q8TDU9 374 aa14.33□□□□□ -0.11
SHOX-204ENST00000554971 RPS10P5Q9NQ39 176 aa14.33□□□□□ -0.11
SHOX-204ENST00000554971 CACNG5Q9UF02 275 aa14.33□□□□□ -0.11
SHOX-204ENST00000554971 TMEM178BH3BS89 294 aa14.33□□□□□ -0.12
SHOX-204ENST00000554971 WNT9BO14905 357 aa14.33□□□□□ -0.12
SHOX-204ENST00000554971 CRYBA1P05813 215 aa14.33□□□□□ -0.12
SHOX-204ENST00000554971 GCSAMQ8N6F7 178 aa14.33□□□□□ -0.12
SHOX-204ENST00000554971 SCGB1C1Q8TD33 95 aa14.33□□□□□ -0.12
SHOX-204ENST00000554971 IGKV1-5P01602 117 aa14.32□□□□□ -0.12
SHOX-204ENST00000554971 HSPB1P04792 205 aaKnown RBP14.32□□□□□ -0.12
SHOX-204ENST00000554971 EPHA1P21709 976 aa14.32□□□□□ -0.12
SHOX-204ENST00000554971 PPP1CCP36873 323 aaKnown RBP14.32□□□□□ -0.12
SHOX-204ENST00000554971 SERF2P84101 59 aa14.32□□□□□ -0.12
SHOX-204ENST00000554971 CATR1Q13166 79 aa14.32□□□□□ -0.12
SHOX-204ENST00000554971 AWAT1Q58HT5 328 aa14.32□□□□□ -0.12
SHOX-204ENST00000554971 ACP7Q6ZNF0 438 aa14.32□□□□□ -0.12
SHOX-204ENST00000554971 TMEM217Q8N7C4 229 aa14.32□□□□□ -0.12
SHOX-204ENST00000554971 OR10G4Q8NGN3 311 aa14.32□□□□□ -0.12
SHOX-204ENST00000554971 PSENENQ9NZ42 101 aa14.32□□□□□ -0.12
SHOX-204ENST00000554971 KCNS2Q9ULS6 477 aa14.32□□□□□ -0.12
SHOX-204ENST00000554971 A6NLC8 198 aa14.31□□□□□ -0.12
SHOX-204ENST00000554971 LHBP01229 141 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms