RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 RAB2AP61019 212 aa10.42□□□□□ -0.74
PPP4R3A-206ENST00000554943 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.42□□□□□ -0.74
PPP4R3A-206ENST00000554943 ATMQ13315 3056 aa10.42□□□□□ -0.74
PPP4R3A-206ENST00000554943 ZG16O60844 167 aa10.42□□□□□ -0.74
PPP4R3A-206ENST00000554943 IGHV2-70P01814 119 aa10.42□□□□□ -0.74
PPP4R3A-206ENST00000554943 S100A6P06703 90 aa10.42□□□□□ -0.74
PPP4R3A-206ENST00000554943 C1QTNF9P0C862 333 aa10.42□□□□□ -0.74
PPP4R3A-206ENST00000554943 NPPCP23582 126 aa10.42□□□□□ -0.74
PPP4R3A-206ENST00000554943 RPS16P62249 146 aaKnown RBP10.42□□□□□ -0.74
PPP4R3A-206ENST00000554943 ZNF718Q3SXZ3 478 aa10.42□□□□□ -0.74
PPP4R3A-206ENST00000554943 COA6Q5JTJ3 125 aaKnown RBP10.42□□□□□ -0.74
PPP4R3A-206ENST00000554943 TEX36Q5VZQ5 186 aa10.42□□□□□ -0.74
PPP4R3A-206ENST00000554943 NCR3LG1Q68D85 454 aa10.42□□□□□ -0.74
PPP4R3A-206ENST00000554943 STUMQ69YW2 141 aa10.42□□□□□ -0.74
PPP4R3A-206ENST00000554943 ABHD5Q8WTS1 349 aa10.42□□□□□ -0.74
PPP4R3A-206ENST00000554943 CIB3Q96Q77 187 aaPredicted RBP10.42□□□□□ -0.74
PPP4R3A-206ENST00000554943 OR6C3Q9NZP0 311 aa10.42□□□□□ -0.74
PPP4R3A-206ENST00000554943 JKAMPQ9P055 326 aa10.42□□□□□ -0.74
PPP4R3A-206ENST00000554943 MARCH11A6NNE9 402 aa10.41□□□□□ -0.74
PPP4R3A-206ENST00000554943 FNDC10F2Z333 226 aa10.41□□□□□ -0.74
PPP4R3A-206ENST00000554943 FCN3O75636 299 aa10.41□□□□□ -0.74
PPP4R3A-206ENST00000554943 ZNF343Q6P1L6 599 aa10.41□□□□□ -0.74
PPP4R3A-206ENST00000554943 ZNF596Q8TC21 504 aa10.41□□□□□ -0.74
PPP4R3A-206ENST00000554943 ZDHHC16Q969W1 377 aa10.41□□□□□ -0.74
PPP4R3A-206ENST00000554943 OPN3Q9H1Y3 402 aaPredicted RBP10.41□□□□□ -0.74
PPP4R3A-206ENST00000554943 CTXND1A0A1B0GTU2 59 aa10.41□□□□□ -0.74
PPP4R3A-206ENST00000554943 TMPRSS2O15393 492 aa10.41□□□□□ -0.74
PPP4R3A-206ENST00000554943 HIST1H2BKO60814 126 aa10.41□□□□□ -0.74
PPP4R3A-206ENST00000554943 HIST1H2BJP06899 126 aa10.41□□□□□ -0.74
PPP4R3A-206ENST00000554943 HIST1H2BOP23527 126 aa10.41□□□□□ -0.74
PPP4R3A-206ENST00000554943 HIST1H2BBP33778 126 aa10.41□□□□□ -0.74
PPP4R3A-206ENST00000554943 CDX1P47902 265 aaPredicted RBP10.41□□□□□ -0.74
PPP4R3A-206ENST00000554943 HIST1H2BDP58876 126 aa10.41□□□□□ -0.74
PPP4R3A-206ENST00000554943 HIST1H2BCP62807 126 aa10.41□□□□□ -0.74
PPP4R3A-206ENST00000554943 MZT1Q08AG7 82 aa10.41□□□□□ -0.74
PPP4R3A-206ENST00000554943 HIST2H2BEQ16778 126 aa10.41□□□□□ -0.74
PPP4R3A-206ENST00000554943 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.41□□□□□ -0.74
PPP4R3A-206ENST00000554943 BEND4Q6ZU67 534 aa10.41□□□□□ -0.74
PPP4R3A-206ENST00000554943 LRP11Q86VZ4 500 aa10.41□□□□□ -0.74
PPP4R3A-206ENST00000554943 PRR18Q8N4B5 295 aa10.41□□□□□ -0.74
PPP4R3A-206ENST00000554943 MRGPRDQ8TDS7 321 aa10.41□□□□□ -0.74
PPP4R3A-206ENST00000554943 DTD1Q8TEA8 209 aa10.41□□□□□ -0.74
PPP4R3A-206ENST00000554943 HIST1H2BHQ93079 126 aa10.41□□□□□ -0.74
PPP4R3A-206ENST00000554943 HIST1H2BNQ99877 126 aa10.41□□□□□ -0.74
PPP4R3A-206ENST00000554943 HIST1H2BMQ99879 126 aa10.41□□□□□ -0.74
PPP4R3A-206ENST00000554943 PUS1Q9Y606 427 aaKnown RBP eCLIP10.41□□□□□ -0.74
PPP4R3A-206ENST00000554943 KBTBD11O94819 623 aa10.4□□□□□ -0.74
PPP4R3A-206ENST00000554943 HPRT1P00492 218 aa10.4□□□□□ -0.74
PPP4R3A-206ENST00000554943 GZMHP20718 246 aa10.4□□□□□ -0.74
PPP4R3A-206ENST00000554943 PDLIM4P50479 330 aa10.4□□□□□ -0.74
PPP4R3A-206ENST00000554943 LINC00205P59089 165 aa10.4□□□□□ -0.74
PPP4R3A-206ENST00000554943 FABP9Q0Z7S8 132 aa10.4□□□□□ -0.74
PPP4R3A-206ENST00000554943 EDARADDQ8WWZ3 215 aa10.4□□□□□ -0.74
PPP4R3A-206ENST00000554943 NIPSNAP3BQ9BS92 247 aa10.4□□□□□ -0.74
PPP4R3A-206ENST00000554943 TMEM14BQ9NUH8 114 aa10.4□□□□□ -0.74
PPP4R3A-206ENST00000554943 TGIF2-C20orf24A0A0A6YYL0 155 aa10.4□□□□□ -0.74
PPP4R3A-206ENST00000554943 MGST3O14880 152 aa10.4□□□□□ -0.74
PPP4R3A-206ENST00000554943 YIF1AO95070 293 aa10.4□□□□□ -0.74
PPP4R3A-206ENST00000554943 MBP02144 154 aa10.4□□□□□ -0.74
PPP4R3A-206ENST00000554943 GLRXP35754 106 aa10.4□□□□□ -0.74
PPP4R3A-206ENST00000554943 TFF3Q07654 80 aa10.4□□□□□ -0.74
PPP4R3A-206ENST00000554943 CATR1Q13166 79 aa10.4□□□□□ -0.74
PPP4R3A-206ENST00000554943 C22orf34Q6ZV56 151 aa10.4□□□□□ -0.74
PPP4R3A-206ENST00000554943 NUP37Q8NFH4 326 aa10.4□□□□□ -0.74
PPP4R3A-206ENST00000554943 QTRT1Q9BXR0 403 aaKnown RBP10.4□□□□□ -0.74
PPP4R3A-206ENST00000554943 CLN8Q9UBY8 286 aa10.4□□□□□ -0.74
PPP4R3A-206ENST00000554943 TRAV20A0A0B4J274 112 aa10.4□□□□□ -0.75
PPP4R3A-206ENST00000554943 MAP1LC3B2A6NCE7 125 aa10.4□□□□□ -0.75
PPP4R3A-206ENST00000554943 GFRA3O60609 400 aa10.4□□□□□ -0.75
PPP4R3A-206ENST00000554943 CLDN1O95832 211 aa10.4□□□□□ -0.75
PPP4R3A-206ENST00000554943 TYMSP04818 313 aa10.4□□□□□ -0.75
PPP4R3A-206ENST00000554943 MEF2BQ02080 365 aaPredicted RBP10.4□□□□□ -0.75
PPP4R3A-206ENST00000554943 TCEAL7Q9BRU2 100 aa10.4□□□□□ -0.75
PPP4R3A-206ENST00000554943 MAP1LC3BQ9GZQ8 125 aa10.4□□□□□ -0.75
PPP4R3A-206ENST00000554943 MANBALQ9NQG1 85 aa10.4□□□□□ -0.75
PPP4R3A-206ENST00000554943 DOCK11Q5JSL3 2073 aa10.39□□□□□ -0.75
PPP4R3A-206ENST00000554943 NCMAPQ5T1S8 102 aa10.39□□□□□ -0.75
PPP4R3A-206ENST00000554943 S100PBPQ96BU1 408 aa10.39□□□□□ -0.75
PPP4R3A-206ENST00000554943 SSX3Q99909 188 aa10.39□□□□□ -0.75
PPP4R3A-206ENST00000554943 MSL2Q9HCI7 577 aa10.39□□□□□ -0.75
PPP4R3A-206ENST00000554943 FOXA2Q9Y261 457 aaPredicted RBP10.39□□□□□ -0.75
PPP4R3A-206ENST00000554943 INS-IGF2F8WCM5 200 aa10.39□□□□□ -0.75
PPP4R3A-206ENST00000554943 TGOLN2O43493 480 aa10.39□□□□□ -0.75
PPP4R3A-206ENST00000554943 CCL11P51671 97 aa10.39□□□□□ -0.75
PPP4R3A-206ENST00000554943 SPANXN5Q5MJ07 72 aa10.39□□□□□ -0.75
PPP4R3A-206ENST00000554943 LRRC29Q8WV35 223 aa10.39□□□□□ -0.75
PPP4R3A-206ENST00000554943 DCTN5Q9BTE1 182 aa10.39□□□□□ -0.75
PPP4R3A-206ENST00000554943 NQO2P16083 231 aa10.39□□□□□ -0.75
PPP4R3A-206ENST00000554943 RBMXL3Q8N7X1 1067 aaKnown RBP10.39□□□□□ -0.75
PPP4R3A-206ENST00000554943 SCGB1C1Q8TD33 95 aa10.39□□□□□ -0.75
PPP4R3A-206ENST00000554943 FAM234AQ9H0X4 552 aa10.39□□□□□ -0.75
PPP4R3A-206ENST00000554943 GNG13Q9P2W3 67 aa10.39□□□□□ -0.75
PPP4R3A-206ENST00000554943 KCNS2Q9ULS6 477 aa10.39□□□□□ -0.75
PPP4R3A-206ENST00000554943 PROCRQ9UNN8 238 aa10.39□□□□□ -0.75
PPP4R3A-206ENST00000554943 UBE2L5PA0A1B0GUS4 154 aa10.38□□□□□ -0.75
PPP4R3A-206ENST00000554943 CCKARP32238 428 aa10.38□□□□□ -0.75
PPP4R3A-206ENST00000554943 OPRK1P41145 380 aa10.38□□□□□ -0.75
PPP4R3A-206ENST00000554943 SPCS3P61009 180 aa10.38□□□□□ -0.75
PPP4R3A-206ENST00000554943 TMEM30BQ3MIR4 351 aa10.38□□□□□ -0.75
PPP4R3A-206ENST00000554943 TGIF2LYQ8IUE0 185 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms