RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 PMCHP20382 165 aa14.04□□□□□ -0.16
PCNX1-209ENST00000554879 CCKARP32238 428 aa14.04□□□□□ -0.16
PCNX1-209ENST00000554879 ELLP55199 621 aaPredicted RBP14.04□□□□□ -0.16
PCNX1-209ENST00000554879 QRFPP83859 136 aa14.04□□□□□ -0.16
PCNX1-209ENST00000554879 VAX1Q5SQQ9 334 aa14.04□□□□□ -0.16
PCNX1-209ENST00000554879 SIGLECL1Q8N7X8 197 aa14.04□□□□□ -0.16
PCNX1-209ENST00000554879 H0YIZ8 118 aa14.03□□□□□ -0.16
PCNX1-209ENST00000554879 M0QZ24 198 aa14.03□□□□□ -0.16
PCNX1-209ENST00000554879 TEX38Q6PEX7 206 aa14.03□□□□□ -0.16
PCNX1-209ENST00000554879 TM2D1Q9BX74 207 aa14.03□□□□□ -0.16
PCNX1-209ENST00000554879 SLC2A8Q9NY64 477 aa14.03□□□□□ -0.16
PCNX1-209ENST00000554879 CCL28Q9NRJ3 127 aa14.03□□□□□ -0.16
PCNX1-209ENST00000554879 ADAMTS20P59510 1910 aa14.03□□□□□ -0.16
PCNX1-209ENST00000554879 IGHV1-18A0A0C4DH31 117 aa14.03□□□□□ -0.16
PCNX1-209ENST00000554879 TRDCB7Z8K6 153 aa14.03□□□□□ -0.16
PCNX1-209ENST00000554879 K7ENP7 123 aa14.03□□□□□ -0.16
PCNX1-209ENST00000554879 OR4A47Q6IF82 309 aa14.03□□□□□ -0.16
PCNX1-209ENST00000554879 C5orf24Q7Z6I8 188 aa14.03□□□□□ -0.16
PCNX1-209ENST00000554879 PCGF1Q9BSM1 259 aa14.03□□□□□ -0.16
PCNX1-209ENST00000554879 TNRC6BQ9UPQ9 1833 aaKnown RBP14.02□□□□□ -0.16
PCNX1-209ENST00000554879 RNF212BA8MTL3 300 aa14.02□□□□□ -0.16
PCNX1-209ENST00000554879 FAM157CP0CG43 387 aa14.02□□□□□ -0.16
PCNX1-209ENST00000554879 MST1LQ2TV78 715 aa14.02□□□□□ -0.16
PCNX1-209ENST00000554879 RBMXL1Q96E39 390 aaKnown RBP14.02□□□□□ -0.16
PCNX1-209ENST00000554879 NMES1Q9C002 83 aa14.02□□□□□ -0.16
PCNX1-209ENST00000554879 OR51I2Q9H344 312 aa14.02□□□□□ -0.16
PCNX1-209ENST00000554879 CFAP54Q96N23 3096 aa14.02□□□□□ -0.16
PCNX1-209ENST00000554879 IFITM10A6NMD0 228 aa14.02□□□□□ -0.16
PCNX1-209ENST00000554879 H0Y8G0 127 aa14.02□□□□□ -0.16
PCNX1-209ENST00000554879 H3BP45 60 aa14.02□□□□□ -0.16
PCNX1-209ENST00000554879 HBE1P02100 147 aa14.02□□□□□ -0.16
PCNX1-209ENST00000554879 ZNF474Q6S9Z5 364 aaPredicted RBP14.02□□□□□ -0.16
PCNX1-209ENST00000554879 IGFL3Q6UXB1 125 aa14.02□□□□□ -0.16
PCNX1-209ENST00000554879 C1orf162Q8NEQ5 155 aaPredicted RBP14.02□□□□□ -0.16
PCNX1-209ENST00000554879 C5orf66Q9H5L9 145 aa14.02□□□□□ -0.16
PCNX1-209ENST00000554879 FAM201AQ5SY85 155 aa14.02□□□□□ -0.17
PCNX1-209ENST00000554879 BTNL8Q6UX41 500 aa14.02□□□□□ -0.17
PCNX1-209ENST00000554879 ZCCHC24Q8N2G6 241 aaKnown RBP14.02□□□□□ -0.17
PCNX1-209ENST00000554879 CMTM2Q8TAZ6 248 aa14.02□□□□□ -0.17
PCNX1-209ENST00000554879 LINC01560Q8TB33 94 aa14.02□□□□□ -0.17
PCNX1-209ENST00000554879 FBLN5Q9UBX5 448 aa14.02□□□□□ -0.17
PCNX1-209ENST00000554879 GPR132Q9UNW8 380 aa14.02□□□□□ -0.17
PCNX1-209ENST00000554879 SHANK1Q9Y566 2161 aa14.02□□□□□ -0.17
PCNX1-209ENST00000554879 RND3P61587 244 aa14.01□□□□□ -0.17
PCNX1-209ENST00000554879 ZNF266Q14584 549 aa14.01□□□□□ -0.17
PCNX1-209ENST00000554879 IGFL2Q6UWQ7 119 aa14.01□□□□□ -0.17
PCNX1-209ENST00000554879 GAPTQ8N292 157 aa14.01□□□□□ -0.17
PCNX1-209ENST00000554879 ST8SIA3O43173 380 aa14.01□□□□□ -0.17
PCNX1-209ENST00000554879 APOA2P02652 100 aa14.01□□□□□ -0.17
PCNX1-209ENST00000554879 OPN1MWP04001 364 aa14.01□□□□□ -0.17
PCNX1-209ENST00000554879 OPN1MW2P0DN77 364 aa14.01□□□□□ -0.17
PCNX1-209ENST00000554879 OPN1MW3P0DN78 364 aa14.01□□□□□ -0.17
PCNX1-209ENST00000554879 SLC35E1Q96K37 410 aa14.01□□□□□ -0.17
PCNX1-209ENST00000554879 HS3ST6Q96QI5 342 aa14.01□□□□□ -0.17
PCNX1-209ENST00000554879 HSPB9Q9BQS6 159 aa14.01□□□□□ -0.17
PCNX1-209ENST00000554879 ZNF586Q9NXT0 402 aa14.01□□□□□ -0.17
PCNX1-209ENST00000554879 OR6C3Q9NZP0 311 aa14.01□□□□□ -0.17
PCNX1-209ENST00000554879 E5RGE8 158 aa14.01□□□□□ -0.17
PCNX1-209ENST00000554879 TNFRSF1AP19438 455 aa14.01□□□□□ -0.17
PCNX1-209ENST00000554879 KLRB1Q12918 225 aa14.01□□□□□ -0.17
PCNX1-209ENST00000554879 IGF2-ASQ6U949 168 aa14.01□□□□□ -0.17
PCNX1-209ENST00000554879 FAM89BQ8N5H3 189 aa14.01□□□□□ -0.17
PCNX1-209ENST00000554879 SPSB4Q96A44 273 aa14.01□□□□□ -0.17
PCNX1-209ENST00000554879 C1orf147Q96MC9 270 aaPredicted RBP14.01□□□□□ -0.17
PCNX1-209ENST00000554879 RNF126Q9BV68 326 aa14.01□□□□□ -0.17
PCNX1-209ENST00000554879 RALYQ9UKM9 306 aaKnown RBP14.01□□□□□ -0.17
PCNX1-209ENST00000554879 NSG2Q9Y328 171 aa14.01□□□□□ -0.17
PCNX1-209ENST00000554879 NDUFS8O00217 210 aa14.01□□□□□ -0.17
PCNX1-209ENST00000554879 PMELP40967 661 aa14.01□□□□□ -0.17
PCNX1-209ENST00000554879 TPPP2P59282 170 aa14.01□□□□□ -0.17
PCNX1-209ENST00000554879 OR4X1Q8NH49 305 aa14.01□□□□□ -0.17
PCNX1-209ENST00000554879 NAA60Q9H7X0 242 aa14.01□□□□□ -0.17
PCNX1-209ENST00000554879 RAB18Q9NP72 206 aa14.01□□□□□ -0.17
PCNX1-209ENST00000554879 MBD3L4A6NDZ8 208 aaPredicted RBP14□□□□□ -0.17
PCNX1-209ENST00000554879 MBD3L3A6NE82 208 aaPredicted RBP14□□□□□ -0.17
PCNX1-209ENST00000554879 MBD3L5A6NJ08 208 aaPredicted RBP14□□□□□ -0.17
PCNX1-209ENST00000554879 CD3EP07766 207 aa14□□□□□ -0.17
PCNX1-209ENST00000554879 MBD3L2Q8NHZ7 208 aaPredicted RBP14□□□□□ -0.17
PCNX1-209ENST00000554879 WNK2Q9Y3S1 2297 aa14□□□□□ -0.17
PCNX1-209ENST00000554879 FAM24AA6NFZ4 105 aa14□□□□□ -0.17
PCNX1-209ENST00000554879 CTSDP07339 412 aaPredicted RBP14□□□□□ -0.17
PCNX1-209ENST00000554879 PKIBQ9C010 78 aa14□□□□□ -0.17
PCNX1-209ENST00000554879 PLEKHA2Q9HB19 425 aa14□□□□□ -0.17
PCNX1-209ENST00000554879 NKX6-3A6NJ46 265 aa14□□□□□ -0.17
PCNX1-209ENST00000554879 WDR31Q8NA23 367 aa14□□□□□ -0.17
PCNX1-209ENST00000554879 PLEKHF2Q9H8W4 249 aa14□□□□□ -0.17
PCNX1-209ENST00000554879 TNRC6AQ8NDV7 1962 aaKnown RBP14□□□□□ -0.17
PCNX1-209ENST00000554879 TMPRSS2O15393 492 aa13.99□□□□□ -0.17
PCNX1-209ENST00000554879 TNFSF13O75888 250 aa13.99□□□□□ -0.17
PCNX1-209ENST00000554879 IL24Q13007 206 aa13.99□□□□□ -0.17
PCNX1-209ENST00000554879 CATR1Q13166 79 aa13.99□□□□□ -0.17
PCNX1-209ENST00000554879 TMEM42Q69YG0 159 aa13.99□□□□□ -0.17
PCNX1-209ENST00000554879 ZNF787Q6DD87 383 aa13.99□□□□□ -0.17
PCNX1-209ENST00000554879 Q6ZVH6 145 aa13.99□□□□□ -0.17
PCNX1-209ENST00000554879 ATOH7Q8N100 152 aa13.99□□□□□ -0.17
PCNX1-209ENST00000554879 ERGIC1Q969X5 290 aa13.99□□□□□ -0.17
PCNX1-209ENST00000554879 MRPL24Q96A35 216 aaKnown RBP13.99□□□□□ -0.17
PCNX1-209ENST00000554879 NUDT16L1Q9BRJ7 211 aaKnown RBP13.99□□□□□ -0.17
PCNX1-209ENST00000554879 SAP30LQ9HAJ7 183 aa13.99□□□□□ -0.17
PCNX1-209ENST00000554879 HOXA4Q00056 320 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms