RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 ULBP2Q9BZM5 246 aa13.21□□□□□ -0.29
SYNE3-203ENST00000554873 RARRES3Q9UL19 164 aa13.21□□□□□ -0.29
SYNE3-203ENST00000554873 CEP192Q8TEP8 1941 aa13.21□□□□□ -0.29
SYNE3-203ENST00000554873 J3QR06 171 aa13.21□□□□□ -0.3
SYNE3-203ENST00000554873 DUSP3P51452 185 aaPredicted RBP13.21□□□□□ -0.3
SYNE3-203ENST00000554873 SLC38A11Q08AI6 406 aa13.21□□□□□ -0.3
SYNE3-203ENST00000554873 WFDC8Q8IUA0 241 aa13.21□□□□□ -0.3
SYNE3-203ENST00000554873 DEFB125Q8N687 156 aa13.21□□□□□ -0.3
SYNE3-203ENST00000554873 GNB1LQ9BYB4 327 aa13.21□□□□□ -0.3
SYNE3-203ENST00000554873 C9orf172C9J069 976 aa13.2□□□□□ -0.3
SYNE3-203ENST00000554873 SAP30O75446 220 aa13.2□□□□□ -0.3
SYNE3-203ENST00000554873 TNFSF15O95150 251 aa13.2□□□□□ -0.3
SYNE3-203ENST00000554873 CRYAAP02489 173 aa13.2□□□□□ -0.3
SYNE3-203ENST00000554873 SRFP11831 508 aa13.2□□□□□ -0.3
SYNE3-203ENST00000554873 RHOBP62745 196 aa13.2□□□□□ -0.3
SYNE3-203ENST00000554873 PAX2Q02962 417 aa13.2□□□□□ -0.3
SYNE3-203ENST00000554873 SFXN3Q9BWM7 321 aa13.2□□□□□ -0.3
SYNE3-203ENST00000554873 ZIC3O60481 467 aa13.2□□□□□ -0.3
SYNE3-203ENST00000554873 LGALS4P56470 323 aa13.2□□□□□ -0.3
SYNE3-203ENST00000554873 RBPJQ06330 500 aa13.2□□□□□ -0.3
SYNE3-203ENST00000554873 MALLQ13021 153 aa13.2□□□□□ -0.3
SYNE3-203ENST00000554873 VASH2Q86V25 355 aa13.2□□□□□ -0.3
SYNE3-203ENST00000554873 BORCS8Q96FH0 119 aa13.2□□□□□ -0.3
SYNE3-203ENST00000554873 RCHY1Q96PM5 261 aa13.2□□□□□ -0.3
SYNE3-203ENST00000554873 KCNIP2Q9NS61 270 aa13.2□□□□□ -0.3
SYNE3-203ENST00000554873 SLC22A20A6NK97 555 aa13.19□□□□□ -0.3
SYNE3-203ENST00000554873 G3V3Y1 287 aa13.19□□□□□ -0.3
SYNE3-203ENST00000554873 SYNGR3O43761 229 aa13.19□□□□□ -0.3
SYNE3-203ENST00000554873 PDCD6O75340 191 aa13.19□□□□□ -0.3
SYNE3-203ENST00000554873 VAMP5O95183 116 aa13.19□□□□□ -0.3
SYNE3-203ENST00000554873 COX5AP20674 150 aa13.19□□□□□ -0.3
SYNE3-203ENST00000554873 MPV17L2Q567V2 206 aa13.19□□□□□ -0.3
SYNE3-203ENST00000554873 FAM58AQ8N1B3 248 aa13.19□□□□□ -0.3
SYNE3-203ENST00000554873 IL36GQ9NZH8 169 aa13.19□□□□□ -0.3
SYNE3-203ENST00000554873 C19orf25Q9UFG5 118 aaPredicted RBP13.19□□□□□ -0.3
SYNE3-203ENST00000554873 A0A1W2PQM1 296 aa13.19□□□□□ -0.3
SYNE3-203ENST00000554873 IGLL1P15814 213 aa13.19□□□□□ -0.3
SYNE3-203ENST00000554873 CNN3Q15417 329 aaKnown RBP13.19□□□□□ -0.3
SYNE3-203ENST00000554873 OSR2Q8N2R0 312 aa13.19□□□□□ -0.3
SYNE3-203ENST00000554873 OR10P1Q8NGE3 313 aa13.19□□□□□ -0.3
SYNE3-203ENST00000554873 CLEC7AQ9BXN2 247 aa13.19□□□□□ -0.3
SYNE3-203ENST00000554873 CCL28Q9NRJ3 127 aa13.19□□□□□ -0.3
SYNE3-203ENST00000554873 IGKV1D-13A0A0B4J2D9 117 aa13.18□□□□□ -0.3
SYNE3-203ENST00000554873 A0A0J9YW62 118 aa13.18□□□□□ -0.3
SYNE3-203ENST00000554873 A0A1W2PR80 420 aa13.18□□□□□ -0.3
SYNE3-203ENST00000554873 AHRRA9YTQ3 701 aa13.18□□□□□ -0.3
SYNE3-203ENST00000554873 G3V4G9 280 aa13.18□□□□□ -0.3
SYNE3-203ENST00000554873 OR7C2O60412 319 aa13.18□□□□□ -0.3
SYNE3-203ENST00000554873 PATE4P0C8F1 98 aa13.18□□□□□ -0.3
SYNE3-203ENST00000554873 IGKV1-13P0DP09 117 aa13.18□□□□□ -0.3
SYNE3-203ENST00000554873 CCL3P10147 92 aa13.18□□□□□ -0.3
SYNE3-203ENST00000554873 SRD5A2P31213 254 aa13.18□□□□□ -0.3
SYNE3-203ENST00000554873 PMP22Q01453 160 aa13.18□□□□□ -0.3
SYNE3-203ENST00000554873 SPANXN5Q5MJ07 72 aa13.18□□□□□ -0.3
SYNE3-203ENST00000554873 LCN12Q6JVE5 192 aa13.18□□□□□ -0.3
SYNE3-203ENST00000554873 Q6ZRM9 215 aa13.18□□□□□ -0.3
SYNE3-203ENST00000554873 PROK2Q9HC23 129 aa13.18□□□□□ -0.3
SYNE3-203ENST00000554873 CACNG5Q9UF02 275 aa13.18□□□□□ -0.3
SYNE3-203ENST00000554873 H0YJW9 148 aa13.18□□□□□ -0.3
SYNE3-203ENST00000554873 PGLYRP1O75594 196 aaPredicted RBP13.18□□□□□ -0.3
SYNE3-203ENST00000554873 MT-ND6P03923 174 aa13.18□□□□□ -0.3
SYNE3-203ENST00000554873 ATP5G3P48201 142 aa13.18□□□□□ -0.3
SYNE3-203ENST00000554873 PSG9Q00887 426 aa13.18□□□□□ -0.3
SYNE3-203ENST00000554873 IZUMO4Q1ZYL8 232 aa13.18□□□□□ -0.3
SYNE3-203ENST00000554873 ZNF324BQ6AW86 544 aaPredicted RBP13.18□□□□□ -0.3
SYNE3-203ENST00000554873 GUSBP11Q6P575 273 aa13.18□□□□□ -0.3
SYNE3-203ENST00000554873 LHFPL2Q6ZUX7 228 aa13.18□□□□□ -0.3
SYNE3-203ENST00000554873 APOBEC3DQ96AK3 386 aaPredicted RBP13.18□□□□□ -0.3
SYNE3-203ENST00000554873 QTRT1Q9BXR0 403 aaKnown RBP13.18□□□□□ -0.3
SYNE3-203ENST00000554873 ZNF442Q9H7R0 627 aa13.18□□□□□ -0.3
SYNE3-203ENST00000554873 WASHC3Q9Y3C0 194 aa13.18□□□□□ -0.3
SYNE3-203ENST00000554873 WDFY3Q8IZQ1 3526 aa13.18□□□□□ -0.3
SYNE3-203ENST00000554873 TRBV20OR9-2A0A075B6H5 130 aa13.17□□□□□ -0.3
SYNE3-203ENST00000554873 CD300LBA8K4G0 201 aa13.17□□□□□ -0.3
SYNE3-203ENST00000554873 J3QW42 95 aa13.17□□□□□ -0.3
SYNE3-203ENST00000554873 TNFSF11O14788 317 aa13.17□□□□□ -0.3
SYNE3-203ENST00000554873 SERPINE2P07093 398 aa13.17□□□□□ -0.3
SYNE3-203ENST00000554873 F2RP25116 425 aa13.17□□□□□ -0.3
SYNE3-203ENST00000554873 NTF4P34130 210 aa13.17□□□□□ -0.3
SYNE3-203ENST00000554873 LGALS7P47929 136 aa13.17□□□□□ -0.3
SYNE3-203ENST00000554873 THBS3P49746 956 aa13.17□□□□□ -0.3
SYNE3-203ENST00000554873 CCL7P80098 99 aa13.17□□□□□ -0.3
SYNE3-203ENST00000554873 OR1F12Q8NHA8 337 aa13.17□□□□□ -0.3
SYNE3-203ENST00000554873 SARAFQ96BY9 339 aa13.17□□□□□ -0.3
SYNE3-203ENST00000554873 IGHV5-10-1A0A0J9YXX1 117 aa13.17□□□□□ -0.3
SYNE3-203ENST00000554873 LIFP15018 202 aa13.17□□□□□ -0.3
SYNE3-203ENST00000554873 PCOLCEQ15113 449 aa13.17□□□□□ -0.3
SYNE3-203ENST00000554873 TRIM61Q5EBN2 209 aa13.17□□□□□ -0.3
SYNE3-203ENST00000554873 BVES-AS1Q5T3Y7 98 aa13.17□□□□□ -0.3
SYNE3-203ENST00000554873 TMEM42Q69YG0 159 aa13.17□□□□□ -0.3
SYNE3-203ENST00000554873 SRXN1Q9BYN0 137 aa13.17□□□□□ -0.3
SYNE3-203ENST00000554873 NAT8BQ9UHF3 227 aa13.17□□□□□ -0.3
SYNE3-203ENST00000554873 Q5PR19 223 aa13.17□□□□□ -0.3
SYNE3-203ENST00000554873 SAMD13Q5VXD3 122 aa13.17□□□□□ -0.3
SYNE3-203ENST00000554873 MRPL14Q6P1L8 145 aaKnown RBP13.17□□□□□ -0.3
SYNE3-203ENST00000554873 BATF2Q8N1L9 274 aa13.17□□□□□ -0.3
SYNE3-203ENST00000554873 FER1L6-AS1Q8NA97 138 aa13.17□□□□□ -0.3
SYNE3-203ENST00000554873 STRADBQ9C0K7 418 aa13.17□□□□□ -0.3
SYNE3-203ENST00000554873 DOCK11Q5JSL3 2073 aa13.16□□□□□ -0.3
SYNE3-203ENST00000554873 M0R1X1 148 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms