RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 KRTCAP3Q53RY4 240 aa11.98□□□□□ -0.49
VTI1B-204ENST00000554659 LAMTOR1Q6IAA8 161 aa11.98□□□□□ -0.49
VTI1B-204ENST00000554659 OR8G5Q8NG78 346 aa11.98□□□□□ -0.49
VTI1B-204ENST00000554659 COL11A2P13942 1736 aaPredicted RBP11.97□□□□□ -0.49
VTI1B-204ENST00000554659 SSTR5P35346 364 aa11.97□□□□□ -0.49
VTI1B-204ENST00000554659 KCNMB1Q16558 191 aa11.97□□□□□ -0.49
VTI1B-204ENST00000554659 PMS2CLQ68D20 193 aa11.97□□□□□ -0.49
VTI1B-204ENST00000554659 ZNF818PQ6ZRF7 136 aa11.97□□□□□ -0.49
VTI1B-204ENST00000554659 ERASQ7Z444 233 aa11.97□□□□□ -0.49
VTI1B-204ENST00000554659 A0A0B4J293 547 aa11.97□□□□□ -0.49
VTI1B-204ENST00000554659 PATE3B3GLJ2 98 aa11.97□□□□□ -0.49
VTI1B-204ENST00000554659 RPL8P62917 257 aaKnown RBP11.97□□□□□ -0.49
VTI1B-204ENST00000554659 PRSS8Q16651 343 aa11.97□□□□□ -0.49
VTI1B-204ENST00000554659 KIAA1644Q3SXP7 199 aa11.97□□□□□ -0.49
VTI1B-204ENST00000554659 ZNF430Q9H8G1 570 aaPredicted RBP11.97□□□□□ -0.49
VTI1B-204ENST00000554659 ZNF71Q9NQZ8 489 aaPredicted RBP11.97□□□□□ -0.49
VTI1B-204ENST00000554659 LRRC37AA6NMS7 1700 aa11.97□□□□□ -0.49
VTI1B-204ENST00000554659 A8MXK9 166 aa11.97□□□□□ -0.49
VTI1B-204ENST00000554659 FOLR2P14207 255 aa11.97□□□□□ -0.49
VTI1B-204ENST00000554659 ATOH7Q8N100 152 aa11.97□□□□□ -0.49
VTI1B-204ENST00000554659 SRIP30626 198 aa11.97□□□□□ -0.49
VTI1B-204ENST00000554659 NPBWR2P48146 333 aa11.97□□□□□ -0.49
VTI1B-204ENST00000554659 ZNF506Q5JVG8 444 aa11.97□□□□□ -0.49
VTI1B-204ENST00000554659 ZNF600Q6ZNG1 722 aa11.97□□□□□ -0.49
VTI1B-204ENST00000554659 CCL13Q99616 98 aa11.97□□□□□ -0.49
VTI1B-204ENST00000554659 QTRT1Q9BXR0 403 aaKnown RBP11.97□□□□□ -0.49
VTI1B-204ENST00000554659 PARLQ9H300 379 aa11.97□□□□□ -0.49
VTI1B-204ENST00000554659 IGKV3-11P04433 115 aa11.96□□□□□ -0.49
VTI1B-204ENST00000554659 TRGC1P0CF51 173 aa11.96□□□□□ -0.49
VTI1B-204ENST00000554659 FXYD3Q14802 87 aa11.96□□□□□ -0.49
VTI1B-204ENST00000554659 ZNF658BQ4V348 819 aaPredicted RBP11.96□□□□□ -0.49
VTI1B-204ENST00000554659 TMEM78Q5T7P6 136 aa11.96□□□□□ -0.49
VTI1B-204ENST00000554659 TMEM54Q969K7 222 aa11.96□□□□□ -0.49
VTI1B-204ENST00000554659 PGLYRP4Q96LB8 373 aa11.96□□□□□ -0.49
VTI1B-204ENST00000554659 TRBV9A0A0B4J1U6 114 aa11.96□□□□□ -0.49
VTI1B-204ENST00000554659 PGPA6NDG6 321 aa11.96□□□□□ -0.49
VTI1B-204ENST00000554659 MARCH11A6NNE9 402 aa11.96□□□□□ -0.49
VTI1B-204ENST00000554659 HLA-DRB1P01911 266 aa11.96□□□□□ -0.49
VTI1B-204ENST00000554659 HSPE1P61604 102 aaKnown RBP11.96□□□□□ -0.49
VTI1B-204ENST00000554659 SPSB4Q96A44 273 aa11.96□□□□□ -0.49
VTI1B-204ENST00000554659 SFXN3Q9BWM7 321 aa11.96□□□□□ -0.49
VTI1B-204ENST00000554659 ID1P41134 155 aa11.96□□□□□ -0.49
VTI1B-204ENST00000554659 EAF1Q96JC9 268 aaPredicted RBP11.96□□□□□ -0.49
VTI1B-204ENST00000554659 WNT5BQ9H1J7 359 aa11.96□□□□□ -0.49
VTI1B-204ENST00000554659 ZNF638Q14966 1978 aaKnown RBP11.96□□□□□ -0.49
VTI1B-204ENST00000554659 RGPD3A6NKT7 1758 aaPredicted RBP11.96□□□□□ -0.49
VTI1B-204ENST00000554659 TDRD15B5MCY1 1934 aaKnown RBP11.96□□□□□ -0.49
VTI1B-204ENST00000554659 TMEM70Q9BUB7 260 aa11.96□□□□□ -0.5
VTI1B-204ENST00000554659 SOX21Q9Y651 276 aaPredicted RBP11.96□□□□□ -0.5
VTI1B-204ENST00000554659 SHANK3Q9BYB0 1731 aa11.96□□□□□ -0.5
VTI1B-204ENST00000554659 TMEM265A0A087WTH1 108 aa11.96□□□□□ -0.5
VTI1B-204ENST00000554659 ODAMA1E959 279 aa11.96□□□□□ -0.5
VTI1B-204ENST00000554659 TMEM250H0YL14 139 aa11.96□□□□□ -0.5
VTI1B-204ENST00000554659 ZG16O60844 167 aa11.96□□□□□ -0.5
VTI1B-204ENST00000554659 C1orf185Q5T7R7 199 aa11.96□□□□□ -0.5
VTI1B-204ENST00000554659 SPRED2Q7Z698 418 aa11.96□□□□□ -0.5
VTI1B-204ENST00000554659 DYNLRB2Q8TF09 96 aa11.96□□□□□ -0.5
VTI1B-204ENST00000554659 C19orf24Q9BVV8 132 aa11.96□□□□□ -0.5
VTI1B-204ENST00000554659 JPT1Q9UK76 154 aa11.96□□□□□ -0.5
VTI1B-204ENST00000554659 RBFOX2O43251 390 aaKnown RBP eCLIP11.95□□□□□ -0.5
VTI1B-204ENST00000554659 NUDT3O95989 172 aa11.95□□□□□ -0.5
VTI1B-204ENST00000554659 ARL14EPLP0DKL9 152 aa11.95□□□□□ -0.5
VTI1B-204ENST00000554659 FHITP49789 147 aa11.95□□□□□ -0.5
VTI1B-204ENST00000554659 EFNB1P98172 346 aa11.95□□□□□ -0.5
VTI1B-204ENST00000554659 KLRB1Q12918 225 aa11.95□□□□□ -0.5
VTI1B-204ENST00000554659 CYB5R2Q6BCY4 276 aa11.95□□□□□ -0.5
VTI1B-204ENST00000554659 ASPHD2Q6ICH7 369 aa11.95□□□□□ -0.5
VTI1B-204ENST00000554659 MMD2Q8IY49 270 aa11.95□□□□□ -0.5
VTI1B-204ENST00000554659 RTN4RQ9BZR6 473 aa11.95□□□□□ -0.5
VTI1B-204ENST00000554659 RAXQ9Y2V3 346 aa11.95□□□□□ -0.5
VTI1B-204ENST00000554659 NEU1Q99519 415 aa11.95□□□□□ -0.5
VTI1B-204ENST00000554659 RBBP6Q7Z6E9 1792 aaKnown RBP11.95□□□□□ -0.5
VTI1B-204ENST00000554659 C8orf88P0DMB2 117 aa11.95□□□□□ -0.5
VTI1B-204ENST00000554659 CALYQ9NYX4 217 aa11.95□□□□□ -0.5
VTI1B-204ENST00000554659 GRIFINA4D1Z8 144 aa11.95□□□□□ -0.5
VTI1B-204ENST00000554659 PRR33A8MZF0 331 aa11.95□□□□□ -0.5
VTI1B-204ENST00000554659 SMAGPQ0VAQ4 97 aa11.95□□□□□ -0.5
VTI1B-204ENST00000554659 TMEM136Q6ZRR5 245 aa11.95□□□□□ -0.5
VTI1B-204ENST00000554659 ZNF826PQ6ZT77 177 aa11.95□□□□□ -0.5
VTI1B-204ENST00000554659 SLC25A45Q8N413 288 aa11.95□□□□□ -0.5
VTI1B-204ENST00000554659 HS3ST3B1Q9Y662 390 aa11.95□□□□□ -0.5
VTI1B-204ENST00000554659 NPIPB6E9PJ23 425 aa11.94□□□□□ -0.5
VTI1B-204ENST00000554659 CTSBP07858 339 aa11.94□□□□□ -0.5
VTI1B-204ENST00000554659 C2orf68Q2NKX9 166 aa11.94□□□□□ -0.5
VTI1B-204ENST00000554659 ZNF441Q8N8Z8 693 aa11.94□□□□□ -0.5
VTI1B-204ENST00000554659 TM2D1Q9BX74 207 aa11.94□□□□□ -0.5
VTI1B-204ENST00000554659 CHRNA10Q9GZZ6 450 aa11.94□□□□□ -0.5
VTI1B-204ENST00000554659 TRIP12Q14669 1992 aaPredicted RBP11.94□□□□□ -0.5
VTI1B-204ENST00000554659 PTGDSP41222 190 aa11.94□□□□□ -0.5
VTI1B-204ENST00000554659 CCL8P80075 99 aa11.94□□□□□ -0.5
VTI1B-204ENST00000554659 HERPUD1Q15011 391 aa11.94□□□□□ -0.5
VTI1B-204ENST00000554659 TMEM177Q53S58 311 aa11.94□□□□□ -0.5
VTI1B-204ENST00000554659 GPHA2Q96T91 129 aa11.94□□□□□ -0.5
VTI1B-204ENST00000554659 IDI2-AS1Q9NZ38 188 aa11.94□□□□□ -0.5
VTI1B-204ENST00000554659 FAM186AA6NE01 2351 aa11.94□□□□□ -0.5
VTI1B-204ENST00000554659 S1PR2O95136 353 aa11.94□□□□□ -0.5
VTI1B-204ENST00000554659 VENTXO95231 258 aa11.94□□□□□ -0.5
VTI1B-204ENST00000554659 TMEM30BQ3MIR4 351 aa11.94□□□□□ -0.5
VTI1B-204ENST00000554659 GGACTQ9BVM4 153 aa11.94□□□□□ -0.5
VTI1B-204ENST00000554659 SRXN1Q9BYN0 137 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms