RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 ALX4Q9H161 411 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-228ENST00000554592 RETNQ9HD89 108 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 KLK5Q9Y337 293 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-228ENST00000554592 ORC6Q9Y5N6 252 aa3.66□□□□□ -1.82
ATXN3-228ENST00000554592 KIAA1109Q2LD37 5005 aa3.65□□□□□ -1.82
ATXN3-228ENST00000554592 IGLV9-49A0A0B4J1Y8 123 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 A0A1W2PN81 502 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 C5orf52A6NGY3 159 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 ZNF736B4DX44 427 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-228ENST00000554592 BMPR1BO00238 502 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 TXNL1O43396 289 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 BRI3O95415 125 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 HLA-DRB1P01911 266 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 ATF1P18846 271 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 GZMHP20718 246 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 ZP3P21754 424 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 SLC2A5P22732 501 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 CHRNA7P36544 502 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 GLP1RP43220 463 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 ALDH3A2P51648 485 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 PSMD7P51665 324 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 CXCR4P61073 352 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 ADARB1P78563 741 aaKnown RBP3.65□□□□□ -1.83
ATXN3-228ENST00000554592 RPL36AP83881 106 aaKnown RBP3.65□□□□□ -1.83
ATXN3-228ENST00000554592 TMEM267Q0VDI3 215 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-228ENST00000554592 PPP1R8Q12972 351 aaKnown RBP3.65□□□□□ -1.83
ATXN3-228ENST00000554592 GINS1Q14691 196 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 ATXN7L3Q14CW9 347 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-228ENST00000554592 TATDN3Q17R31 274 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 ODF4Q2M2E3 257 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 LGALS9CQ6DKI2 356 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 FAHD1Q6P587 224 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 ZNF773Q6PK81 442 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 TMEM182Q6ZP80 229 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-228ENST00000554592 RDH10Q8IZV5 341 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 CBR4Q8N4T8 237 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 BBS1Q8NFJ9 593 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 OR52M1Q8NGK5 317 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 TRUB1Q8WWH5 349 aaKnown RBP3.65□□□□□ -1.83
ATXN3-228ENST00000554592 RTN4IP1Q8WWV3 396 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-228ENST00000554592 S100ZQ8WXG8 99 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 PP6455Q8WZ26 134 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 TMEM106AQ96A25 262 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 MBOAT4Q96T53 435 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 SLC29A1Q99808 456 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 REEP1Q9H902 201 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 SLC25A19Q9HC21 320 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 FAM118AQ9NWS6 357 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 ENOPH1Q9UHY7 261 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 KIF25Q9UIL4 384 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 ALMS1Q8TCU4 4167 aa3.65□□□□□ -1.83
ATXN3-228ENST00000554592 A0A087WYN8 130 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 IGHV7-81A0A0B4J1V7 117 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 TRAV24A0A0B4J272 114 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 IGKV1-9A0A0C4DH69 117 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 IGKV1-12A0A0C4DH73 117 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 A4D1N5 150 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 ATP6V0E1O15342 81 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 MAGEB3O15480 346 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 MAGEB4O15481 346 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-228ENST00000554592 PRAF2O60831 178 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 DEDDO75618 318 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 IGKV1D-12P01611 117 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 IGHV3-11P01762 117 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 MRPL3P09001 348 aaKnown RBP3.64□□□□□ -1.83
ATXN3-228ENST00000554592 OCM2P0CE71 109 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 OCMP0CE72 109 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-228ENST00000554592 SLC2A2P11168 524 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-228ENST00000554592 CD40LGP29965 261 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 BLVRBP30043 206 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-228ENST00000554592 RANBP1P43487 201 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 NKX2-1P43699 371 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-228ENST00000554592 KCNJ3P48549 501 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 PAX5Q02548 391 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 TMED1Q13445 227 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 KLF5Q13887 457 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-228ENST00000554592 CDK5R1Q15078 307 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 MMDQ15546 238 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 Q3ZCU0 254 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 ZNF660Q6AZW8 331 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-228ENST00000554592 OR2T5Q6IEZ7 315 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 LCN12Q6JVE5 192 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 PYHIN1Q6K0P9 492 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 IL34Q6ZMJ4 242 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 UTS2BQ765I0 119 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 NRARPQ7Z6K4 114 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 CLVS1Q8IUQ0 354 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-228ENST00000554592 SAXO1Q8IYX7 474 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 Q8N402 240 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 TCTEX1D1Q8N7M0 179 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 ZNF383Q8NA42 475 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 ZNF555Q8NEP9 628 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 OR10G2Q8NGC3 310 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 OR13F1Q8NGS4 319 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 OR2T29Q8NH02 315 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 MRGPRDQ8TDS7 321 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 PHLDA1Q8WV24 401 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-228ENST00000554592 CYGBQ8WWM9 190 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 RGP1Q92546 391 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-228ENST00000554592 NIPSNAP1Q9BPW8 284 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms