RNA–Protein interactions for RNA: ENST00000554498.1

SLC38A6-219, Transcript of solute carrier family 38 member 6, humanhuman

TSL 3

Gene SLC38A6, Length 470 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A6-219ENST00000554498 TMEM222Q9H0R3 208 aa-0.01□□□□□ -2.41
SLC38A6-219ENST00000554498 SNRNP200O75643 2136 aaKnown RBP-0.01□□□□□ -2.41
SLC38A6-219ENST00000554498 CHD2O14647 1828 aaKnown RBP-0.01□□□□□ -2.41
SLC38A6-219ENST00000554498 SCAF11Q99590 1463 aaKnown RBP-0.02□□□□□ -2.41
SLC38A6-219ENST00000554498 SETD5Q9C0A6 1442 aa-0.02□□□□□ -2.41
SLC38A6-219ENST00000554498 TNRC6AQ8NDV7 1962 aaKnown RBP-0.02□□□□□ -2.41
SLC38A6-219ENST00000554498 GREB1Q4ZG55 1949 aa-0.02□□□□□ -2.41
SLC38A6-219ENST00000554498 A0A087WUU8 490 aa-0.02□□□□□ -2.41
SLC38A6-219ENST00000554498 PRH1P02810 166 aa-0.02□□□□□ -2.41
SLC38A6-219ENST00000554498 LGALS1P09382 135 aaKnown RBP-0.02□□□□□ -2.41
SLC38A6-219ENST00000554498 PSMB8P28062 276 aa-0.02□□□□□ -2.41
SLC38A6-219ENST00000554498 ETV1P50549 477 aa-0.02□□□□□ -2.41
SLC38A6-219ENST00000554498 TAS2R20P59543 309 aa-0.02□□□□□ -2.41
SLC38A6-219ENST00000554498 SPATA8Q6RVD6 105 aa-0.02□□□□□ -2.41
SLC38A6-219ENST00000554498 SCGB1D4Q6XE38 83 aa-0.02□□□□□ -2.41
SLC38A6-219ENST00000554498 SBSPONQ8IVN8 264 aa-0.02□□□□□ -2.41
SLC38A6-219ENST00000554498 BAP18Q8IXM2 172 aa-0.02□□□□□ -2.41
SLC38A6-219ENST00000554498 OR7D2Q96RA2 312 aa-0.02□□□□□ -2.41
SLC38A6-219ENST00000554498 UGT2B28Q9BY64 529 aa-0.02□□□□□ -2.41
SLC38A6-219ENST00000554498 TNRC6BQ9UPQ9 1833 aaKnown RBP-0.02□□□□□ -2.41
SLC38A6-219ENST00000554498 SMARCA4P51532 1647 aa-0.02□□□□□ -2.41
SLC38A6-219ENST00000554498 NPATQ14207 1427 aa-0.03□□□□□ -2.41
SLC38A6-219ENST00000554498 CNTRLQ7Z7A1 2325 aa-0.03□□□□□ -2.41
SLC38A6-219ENST00000554498 FLT4P35916 1363 aa-0.03□□□□□ -2.41
SLC38A6-219ENST00000554498 IBA57-AS1B1ANH7 110 aa-0.03□□□□□ -2.41
SLC38A6-219ENST00000554498 ARL6IP5O75915 188 aa-0.03□□□□□ -2.41
SLC38A6-219ENST00000554498 CSTAP01040 98 aa-0.03□□□□□ -2.41
SLC38A6-219ENST00000554498 HBZP02008 142 aa-0.03□□□□□ -2.41
SLC38A6-219ENST00000554498 RNASE3P12724 160 aaKnown RBP-0.03□□□□□ -2.41
SLC38A6-219ENST00000554498 AGTR1P30556 359 aa-0.03□□□□□ -2.41
SLC38A6-219ENST00000554498 UMODL1-AS1Q8N2C9 162 aa-0.03□□□□□ -2.41
SLC38A6-219ENST00000554498 ZNF565Q8N9K5 539 aa-0.03□□□□□ -2.41
SLC38A6-219ENST00000554498 CPNE2Q96FN4 548 aaPredicted RBP-0.03□□□□□ -2.41
SLC38A6-219ENST00000554498 FAM210AQ96ND0 272 aa-0.03□□□□□ -2.41
SLC38A6-219ENST00000554498 SMR3AQ99954 134 aa-0.03□□□□□ -2.41
SLC38A6-219ENST00000554498 EIF5A2Q9GZV4 153 aaKnown RBP-0.03□□□□□ -2.41
SLC38A6-219ENST00000554498 RAB1BQ9H0U4 201 aa-0.03□□□□□ -2.41
SLC38A6-219ENST00000554498 GMEB1Q9Y692 573 aa-0.03□□□□□ -2.41
SLC38A6-219ENST00000554498 SYNE1Q8NF91 8797 aaKnown RBP-0.03□□□□□ -2.41
SLC38A6-219ENST00000554498 EML6Q6ZMW3 1958 aa-0.04□□□□□ -2.42
SLC38A6-219ENST00000554498 DICER1Q9UPY3 1922 aaKnown RBP-0.04□□□□□ -2.42
SLC38A6-219ENST00000554498 TRAV38-1A0A0B4J264 116 aa-0.04□□□□□ -2.42
SLC38A6-219ENST00000554498 A0A0J9YW62 118 aa-0.04□□□□□ -2.42
SLC38A6-219ENST00000554498 H3BT86 120 aa-0.04□□□□□ -2.42
SLC38A6-219ENST00000554498 M0R381 172 aa-0.04□□□□□ -2.42
SLC38A6-219ENST00000554498 UGT2B11O75310 529 aa-0.04□□□□□ -2.42
SLC38A6-219ENST00000554498 LDOC1O95751 146 aaPredicted RBP-0.04□□□□□ -2.42
SLC38A6-219ENST00000554498 TRGC1P0CF51 173 aa-0.04□□□□□ -2.42
SLC38A6-219ENST00000554498 LIMS3P0CW19 117 aa-0.04□□□□□ -2.42
SLC38A6-219ENST00000554498 LIMS4P0CW20 117 aa-0.04□□□□□ -2.42
SLC38A6-219ENST00000554498 CRATP43155 626 aa-0.04□□□□□ -2.42
SLC38A6-219ENST00000554498 RPL28P46779 137 aaKnown RBP-0.04□□□□□ -2.42
SLC38A6-219ENST00000554498 BTN3A2P78410 334 aa-0.04□□□□□ -2.42
SLC38A6-219ENST00000554498 XIAPP98170 497 aa-0.04□□□□□ -2.42
SLC38A6-219ENST00000554498 TMEM267Q0VDI3 215 aaPredicted RBP-0.04□□□□□ -2.42
SLC38A6-219ENST00000554498 TMEM86AQ8N2M4 240 aa-0.04□□□□□ -2.42
SLC38A6-219ENST00000554498 TMEM239Q8WW34 195 aa-0.04□□□□□ -2.42
SLC38A6-219ENST00000554498 TMEM56Q96MV1 263 aa-0.04□□□□□ -2.42
SLC38A6-219ENST00000554498 ENPP5Q9UJA9 477 aa-0.04□□□□□ -2.42
SLC38A6-219ENST00000554498 GLI3P10071 1580 aa-0.04□□□□□ -2.42
SLC38A6-219ENST00000554498 MEGF8Q7Z7M0 2845 aa-0.04□□□□□ -2.42
SLC38A6-219ENST00000554498 SIPA1L1O43166 1804 aa-0.04□□□□□ -2.42
SLC38A6-219ENST00000554498 TNCP24821 2201 aa-0.05□□□□□ -2.42
SLC38A6-219ENST00000554498 MEIS3P1A6NDR6 274 aa-0.05□□□□□ -2.42
SLC38A6-219ENST00000554498 OR51F1A6NGY5 319 aa-0.05□□□□□ -2.42
SLC38A6-219ENST00000554498 SGCEO43556 437 aa-0.05□□□□□ -2.42
SLC38A6-219ENST00000554498 PPBPP02775 128 aa-0.05□□□□□ -2.42
SLC38A6-219ENST00000554498 TPM2P07951 284 aa-0.05□□□□□ -2.42
SLC38A6-219ENST00000554498 NQO2P16083 231 aa-0.05□□□□□ -2.42
SLC38A6-219ENST00000554498 FXYD7P58549 80 aa-0.05□□□□□ -2.42
SLC38A6-219ENST00000554498 RAB14P61106 215 aa-0.05□□□□□ -2.42
SLC38A6-219ENST00000554498 DAD1P61803 113 aa-0.05□□□□□ -2.42
SLC38A6-219ENST00000554498 LCN8Q6JVE9 175 aa-0.05□□□□□ -2.42
SLC38A6-219ENST00000554498 DMBT1Q9UGM3 2413 aaPredicted RBP-0.05□□□□□ -2.42
SLC38A6-219ENST00000554498 KIAA0232Q92628 1395 aa-0.06□□□□□ -2.42
SLC38A6-219ENST00000554498 ABCC12Q96J65 1359 aa-0.06□□□□□ -2.42
SLC38A6-219ENST00000554498 ASCC3Q8N3C0 2202 aaKnown RBP-0.06□□□□□ -2.42
SLC38A6-219ENST00000554498 CREBL2O60519 120 aaPredicted RBP-0.06□□□□□ -2.42
SLC38A6-219ENST00000554498 CST4P01036 141 aa-0.06□□□□□ -2.42
SLC38A6-219ENST00000554498 KRTAP2-3P0C7H8 128 aa-0.06□□□□□ -2.42
SLC38A6-219ENST00000554498 TBPL1P62380 186 aa-0.06□□□□□ -2.42
SLC38A6-219ENST00000554498 HIST1H4AP62805 103 aaKnown RBP-0.06□□□□□ -2.42
SLC38A6-219ENST00000554498 TEX36Q5VZQ5 186 aa-0.06□□□□□ -2.42
SLC38A6-219ENST00000554498 SLC22A24Q8N4F4 322 aa-0.06□□□□□ -2.42
SLC38A6-219ENST00000554498 OBSCN-AS1Q96MR7 158 aa-0.06□□□□□ -2.42
SLC38A6-219ENST00000554498 KRTAP2-4Q9BYR9 128 aa-0.06□□□□□ -2.42
SLC38A6-219ENST00000554498 KRTAP2-1Q9BYU5 128 aa-0.06□□□□□ -2.42
SLC38A6-219ENST00000554498 MRM2Q9UI43 246 aaKnown RBP-0.06□□□□□ -2.42
SLC38A6-219ENST00000554498 TONSLQ96HA7 1378 aa-0.06□□□□□ -2.42
SLC38A6-219ENST00000554498 IGSF10Q6WRI0 2623 aa-0.07□□□□□ -2.42
SLC38A6-219ENST00000554498 COPEO14579 308 aa-0.07□□□□□ -2.42
SLC38A6-219ENST00000554498 HMMRO75330 724 aa-0.07□□□□□ -2.42
SLC38A6-219ENST00000554498 ALDH3A1P30838 453 aa-0.07□□□□□ -2.42
SLC38A6-219ENST00000554498 SNAP25P60880 206 aa-0.07□□□□□ -2.42
SLC38A6-219ENST00000554498 TMEM249Q2WGJ8 235 aa-0.07□□□□□ -2.42
SLC38A6-219ENST00000554498 Q8N6K4 173 aa-0.07□□□□□ -2.42
SLC38A6-219ENST00000554498 TLCD1Q96CP7 247 aa-0.07□□□□□ -2.42
SLC38A6-219ENST00000554498 CHST6Q9GZX3 395 aa-0.07□□□□□ -2.42
SLC38A6-219ENST00000554498 TRABDQ9H4I3 376 aa-0.07□□□□□ -2.42
SLC38A6-219ENST00000554498 C10orf95Q9H7T3 257 aa-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms