RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 OR4P4Q8NGL7 312 aa13.11□□□□□ -0.31
NEK9-204ENST00000554258 OR10J5Q8NHC4 309 aa13.11□□□□□ -0.31
NEK9-204ENST00000554258 LEAP2Q969E1 77 aa13.11□□□□□ -0.31
NEK9-204ENST00000554258 AGMATQ9BSE5 352 aa13.11□□□□□ -0.31
NEK9-204ENST00000554258 SLC23A1Q9UHI7 598 aa13.11□□□□□ -0.31
NEK9-204ENST00000554258 ANKRD20A5PA0PJZ0 165 aa13.1□□□□□ -0.31
NEK9-204ENST00000554258 BET1O15155 118 aa13.1□□□□□ -0.31
NEK9-204ENST00000554258 SLC31A2O15432 143 aa13.1□□□□□ -0.31
NEK9-204ENST00000554258 FCER2P06734 321 aa13.1□□□□□ -0.31
NEK9-204ENST00000554258 HLA-DMAP28067 261 aa13.1□□□□□ -0.31
NEK9-204ENST00000554258 BRS3P32247 399 aa13.1□□□□□ -0.31
NEK9-204ENST00000554258 ZNF137PP52743 207 aa13.1□□□□□ -0.31
NEK9-204ENST00000554258 DYRK1AQ13627 763 aa13.1□□□□□ -0.31
NEK9-204ENST00000554258 HLA-DRB5Q30154 266 aa13.1□□□□□ -0.31
NEK9-204ENST00000554258 ACTBL2Q562R1 376 aa13.1□□□□□ -0.31
NEK9-204ENST00000554258 RNASE12Q5GAN4 147 aaKnown RBP13.1□□□□□ -0.31
NEK9-204ENST00000554258 ZNF429Q86V71 674 aa13.1□□□□□ -0.31
NEK9-204ENST00000554258 GIMAP1Q8WWP7 306 aa13.1□□□□□ -0.31
NEK9-204ENST00000554258 ST6GALNAC6Q969X2 333 aa13.1□□□□□ -0.31
NEK9-204ENST00000554258 PARP12Q9H0J9 701 aaKnown RBP13.1□□□□□ -0.31
NEK9-204ENST00000554258 C11orf54Q9H0W9 315 aaPredicted RBP13.1□□□□□ -0.31
NEK9-204ENST00000554258 RDH8Q9NYR8 311 aa13.1□□□□□ -0.31
NEK9-204ENST00000554258 TAS2R8Q9NYW2 309 aa13.1□□□□□ -0.31
NEK9-204ENST00000554258 LINC00527Q9UJ94 153 aa13.1□□□□□ -0.31
NEK9-204ENST00000554258 FAM172BPA6NC97 362 aa13.09□□□□□ -0.31
NEK9-204ENST00000554258 ZNF736B4DX44 427 aaPredicted RBP13.09□□□□□ -0.31
NEK9-204ENST00000554258 BUB1B-PAK6H3BSN5 160 aa13.09□□□□□ -0.31
NEK9-204ENST00000554258 TOR1AO14656 332 aa13.09□□□□□ -0.31
NEK9-204ENST00000554258 HSPA12AO43301 675 aa13.09□□□□□ -0.31
NEK9-204ENST00000554258 IGHV3-7P01780 117 aa13.09□□□□□ -0.31
NEK9-204ENST00000554258 OR5H8P0DN80 308 aa13.09□□□□□ -0.31
NEK9-204ENST00000554258 MED14OSP0DP75 135 aa13.09□□□□□ -0.31
NEK9-204ENST00000554258 CD40LGP29965 261 aa13.09□□□□□ -0.31
NEK9-204ENST00000554258 RFX2P48378 723 aa13.09□□□□□ -0.31
NEK9-204ENST00000554258 PPP5CP53041 499 aa13.09□□□□□ -0.31
NEK9-204ENST00000554258 TAS2R19P59542 299 aa13.09□□□□□ -0.31
NEK9-204ENST00000554258 ARPC4P59998 168 aa13.09□□□□□ -0.31
NEK9-204ENST00000554258 BAK1Q16611 211 aa13.09□□□□□ -0.31
NEK9-204ENST00000554258 EDARADDQ8WWZ3 215 aa13.09□□□□□ -0.31
NEK9-204ENST00000554258 GHITMQ9H3K2 345 aa13.09□□□□□ -0.31
NEK9-204ENST00000554258 DPM3Q9P2X0 92 aa13.09□□□□□ -0.31
NEK9-204ENST00000554258 GAB2Q9UQC2 676 aa13.09□□□□□ -0.31
NEK9-204ENST00000554258 A0A1W2PPE3 182 aa13.08□□□□□ -0.32
NEK9-204ENST00000554258 PMP2P02689 132 aa13.08□□□□□ -0.32
NEK9-204ENST00000554258 CD3DP04234 171 aa13.08□□□□□ -0.32
NEK9-204ENST00000554258 RPLP1P05386 114 aaKnown RBP13.08□□□□□ -0.32
NEK9-204ENST00000554258 HTR1DP28221 377 aa13.08□□□□□ -0.32
NEK9-204ENST00000554258 HRH1P35367 487 aa13.08□□□□□ -0.32
NEK9-204ENST00000554258 OR3A3P47888 321 aa13.08□□□□□ -0.32
NEK9-204ENST00000554258 KLF9Q13886 244 aaPredicted RBP13.08□□□□□ -0.32
NEK9-204ENST00000554258 ODF3L1Q8IXM7 274 aa13.08□□□□□ -0.32
NEK9-204ENST00000554258 OR5H2Q8NGV7 314 aa13.08□□□□□ -0.32
NEK9-204ENST00000554258 DEDD2Q8WXF8 326 aa13.08□□□□□ -0.32
NEK9-204ENST00000554258 CREB3L1Q96BA8 519 aa13.08□□□□□ -0.32
NEK9-204ENST00000554258 GINS4Q9BRT9 223 aa13.08□□□□□ -0.32
NEK9-204ENST00000554258 ABHD14AQ9BUJ0 271 aa13.08□□□□□ -0.32
NEK9-204ENST00000554258 IFI27L2Q9H2X8 130 aa13.08□□□□□ -0.32
NEK9-204ENST00000554258 OR2W1Q9Y3N9 320 aa13.08□□□□□ -0.32
NEK9-204ENST00000554258 LEUTXA8MZ59 168 aa13.07□□□□□ -0.32
NEK9-204ENST00000554258 ZNF735P0CB33 412 aa13.07□□□□□ -0.32
NEK9-204ENST00000554258 NFYAP23511 347 aaPredicted RBP13.07□□□□□ -0.32
NEK9-204ENST00000554258 CNTFRP26992 372 aa13.07□□□□□ -0.32
NEK9-204ENST00000554258 GNG10P50151 68 aa13.07□□□□□ -0.32
NEK9-204ENST00000554258 RAB7AP51149 207 aa13.07□□□□□ -0.32
NEK9-204ENST00000554258 ARHGDIBP52566 201 aa13.07□□□□□ -0.32
NEK9-204ENST00000554258 FHL3Q13643 280 aa13.07□□□□□ -0.32
NEK9-204ENST00000554258 ZNF846Q147U1 533 aa13.07□□□□□ -0.32
NEK9-204ENST00000554258 STEAP1BQ6NZ63 245 aa13.07□□□□□ -0.32
NEK9-204ENST00000554258 DRAM1Q8N682 238 aa13.07□□□□□ -0.32
NEK9-204ENST00000554258 OR2AK2Q8NG84 335 aa13.07□□□□□ -0.32
NEK9-204ENST00000554258 CCDC32Q9BV29 185 aa13.07□□□□□ -0.32
NEK9-204ENST00000554258 WDR12Q9GZL7 423 aaKnown RBP13.07□□□□□ -0.32
NEK9-204ENST00000554258 C19orf73Q9NVV2 129 aa13.07□□□□□ -0.32
NEK9-204ENST00000554258 EHFQ9NZC4 300 aa13.07□□□□□ -0.32
NEK9-204ENST00000554258 AMMECR1Q9Y4X0 333 aaPredicted RBP13.07□□□□□ -0.32
NEK9-204ENST00000554258 OOSP1A8MZH6 123 aa13.06□□□□□ -0.32
NEK9-204ENST00000554258 PROP1O75360 226 aa13.06□□□□□ -0.32
NEK9-204ENST00000554258 AKAIN1P0CW23 69 aa13.06□□□□□ -0.32
NEK9-204ENST00000554258 FCGR2CP31995 323 aa13.06□□□□□ -0.32
NEK9-204ENST00000554258 CDX1P47902 265 aaPredicted RBP13.06□□□□□ -0.32
NEK9-204ENST00000554258 HAGHQ16775 308 aa13.06□□□□□ -0.32
NEK9-204ENST00000554258 TEX38Q6PEX7 206 aa13.06□□□□□ -0.32
NEK9-204ENST00000554258 ARRDC1Q8N5I2 433 aa13.06□□□□□ -0.32
NEK9-204ENST00000554258 ZNF251Q9BRH9 671 aa13.06□□□□□ -0.32
NEK9-204ENST00000554258 KRTAP4-5Q9BYR2 181 aa13.06□□□□□ -0.32
NEK9-204ENST00000554258 TINAGL1Q9GZM7 467 aaPredicted RBP13.06□□□□□ -0.32
NEK9-204ENST00000554258 MOB4Q9Y3A3 225 aa13.06□□□□□ -0.32
NEK9-204ENST00000554258 A8MZ25 164 aa13.05□□□□□ -0.32
NEK9-204ENST00000554258 M0QYG6 137 aa13.05□□□□□ -0.32
NEK9-204ENST00000554258 ST8SIA5O15466 376 aa13.05□□□□□ -0.32
NEK9-204ENST00000554258 SAP30O75446 220 aa13.05□□□□□ -0.32
NEK9-204ENST00000554258 RAB3DO95716 219 aa13.05□□□□□ -0.32
NEK9-204ENST00000554258 OR8U9P0C7N5 309 aa13.05□□□□□ -0.32
NEK9-204ENST00000554258 IL7P13232 177 aa13.05□□□□□ -0.32
NEK9-204ENST00000554258 AADACP22760 399 aa13.05□□□□□ -0.32
NEK9-204ENST00000554258 CEACAM3P40198 252 aa13.05□□□□□ -0.32
NEK9-204ENST00000554258 ZNF816Q0VGE8 651 aaPredicted RBP13.05□□□□□ -0.32
NEK9-204ENST00000554258 MEF2DQ14814 521 aa13.05□□□□□ -0.32
NEK9-204ENST00000554258 RNASE10Q5GAN6 216 aaKnown RBP13.05□□□□□ -0.32
NEK9-204ENST00000554258 CXorf66Q5JRM2 361 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms