RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 ZNF383Q8NA42 475 aa6.2□□□□□ -1.42
TDP1-209ENST00000554180 DRAXINQ8NBI3 349 aaPredicted RBP6.2□□□□□ -1.42
TDP1-209ENST00000554180 OSR1Q8TAX0 266 aaPredicted RBP6.2□□□□□ -1.42
TDP1-209ENST00000554180 SEC22AQ96IW7 307 aa6.2□□□□□ -1.42
TDP1-209ENST00000554180 NABP2Q9BQ15 211 aa6.2□□□□□ -1.42
TDP1-209ENST00000554180 AIFM2Q9BRQ8 373 aa6.2□□□□□ -1.42
TDP1-209ENST00000554180 NMES1Q9C002 83 aa6.2□□□□□ -1.42
TDP1-209ENST00000554180 C7orf69Q9H7B7 122 aa6.2□□□□□ -1.42
TDP1-209ENST00000554180 SLC35D1Q9NTN3 355 aa6.2□□□□□ -1.42
TDP1-209ENST00000554180 COA4Q9NYJ1 87 aa6.2□□□□□ -1.42
TDP1-209ENST00000554180 PRR13Q9NZ81 148 aa6.2□□□□□ -1.42
TDP1-209ENST00000554180 WASHC3Q9Y3C0 194 aa6.2□□□□□ -1.42
TDP1-209ENST00000554180 ARHGAP32A7KAX9 2087 aa6.2□□□□□ -1.42
TDP1-209ENST00000554180 CSPG4Q6UVK1 2322 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 IGHV1-3A0A0C4DH29 117 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 CENPVL3A0A0U1RRI6 287 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 A0A1B0GU03 582 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 A0A1W2PPI3 338 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 C5orf51A6NDU8 294 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 NPFFO15130 113 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 S1PR2O95136 353 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 CRYZL1O95825 349 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 HRASP01112 189 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 TGFAP01135 160 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 IGKV1-39P01597 117 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 IGKV1D-39P04432 117 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 HOXB5P09067 269 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 NQO2P16083 231 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 DLX1P56177 255 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 ERVK-16P61578 105 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 FGL1Q08830 312 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 DIAPH2-AS1Q14236 149 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 POU2AF1Q16633 256 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 C2orf68Q2NKX9 166 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 IAH1Q2TAA2 248 aaPredicted RBP6.19□□□□□ -1.42
TDP1-209ENST00000554180 TMEM177Q53S58 311 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 GPR157Q5UAW9 335 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 CYB5R2Q6BCY4 276 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 THOC7Q6I9Y2 204 aaKnown RBP6.19□□□□□ -1.42
TDP1-209ENST00000554180 LYZL2Q7Z4W2 148 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 TEX29Q8N6K0 151 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 OR4C13Q8NGP0 309 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 RNASE11Q8TAA1 199 aaKnown RBP6.19□□□□□ -1.42
TDP1-209ENST00000554180 LHX4Q969G2 390 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 MALSU1Q96EH3 234 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 RRNAD1Q96FB5 475 aaKnown RBP6.19□□□□□ -1.42
TDP1-209ENST00000554180 C2orf50Q96LR7 162 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 PDCD10Q9BUL8 212 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 RANGRFQ9HD47 186 aaPredicted RBP6.19□□□□□ -1.42
TDP1-209ENST00000554180 ZFP57Q9NU63 452 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 CACFD1Q9UGQ2 172 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 MMP24Q9Y5R2 645 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 ZANQ9Y493 2812 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 VPS13CQ709C8 3753 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 TLN2Q9Y4G6 2542 aa6.19□□□□□ -1.42
TDP1-209ENST00000554180 ABCA1O95477 2261 aa6.18□□□□□ -1.42
TDP1-209ENST00000554180 TRAV40A0A0B4J280 105 aa6.18□□□□□ -1.42
TDP1-209ENST00000554180 IGHV1-69DA0A0B4J2H0 117 aa6.18□□□□□ -1.42
TDP1-209ENST00000554180 C13orf42A0A1B0GVH6 325 aa6.18□□□□□ -1.42
TDP1-209ENST00000554180 A8MV72 311 aaPredicted RBP6.18□□□□□ -1.42
TDP1-209ENST00000554180 FAM25EA8MYX2 175 aa6.18□□□□□ -1.42
TDP1-209ENST00000554180 H7C2Y5 167 aa6.18□□□□□ -1.42
TDP1-209ENST00000554180 CCSO14618 274 aa6.18□□□□□ -1.42
TDP1-209ENST00000554180 SIX6O95475 246 aa6.18□□□□□ -1.42
TDP1-209ENST00000554180 IGKV1-5P01602 117 aa6.18□□□□□ -1.42
TDP1-209ENST00000554180 IGHV1-69P01742 117 aa6.18□□□□□ -1.42
TDP1-209ENST00000554180 IGKV1-16P04430 117 aa6.18□□□□□ -1.42
TDP1-209ENST00000554180 FGF2P09038 288 aa6.18□□□□□ -1.42
TDP1-209ENST00000554180 P0C879 139 aa6.18□□□□□ -1.42
TDP1-209ENST00000554180 PET100P0DJ07 73 aa6.18□□□□□ -1.42
TDP1-209ENST00000554180 CD1BP29016 333 aa6.18□□□□□ -1.42
TDP1-209ENST00000554180 SAA4P35542 130 aa6.18□□□□□ -1.42
TDP1-209ENST00000554180 LGALS7P47929 136 aa6.18□□□□□ -1.42
TDP1-209ENST00000554180 REG1BP48304 166 aa6.18□□□□□ -1.42
TDP1-209ENST00000554180 LINC00205P59089 165 aa6.18□□□□□ -1.42
TDP1-209ENST00000554180 PRB3Q04118 309 aaPredicted RBP6.18□□□□□ -1.42
TDP1-209ENST00000554180 IL15RAQ13261 267 aa6.18□□□□□ -1.42
TDP1-209ENST00000554180 AARDQ4LEZ3 155 aa6.18□□□□□ -1.42
TDP1-209ENST00000554180 OR2B11Q5JQS5 317 aa6.18□□□□□ -1.42
TDP1-209ENST00000554180 LDLRAD2Q5SZI1 272 aa6.18□□□□□ -1.42
TDP1-209ENST00000554180 LHFPL4Q7Z7J7 247 aa6.18□□□□□ -1.42
TDP1-209ENST00000554180 ZBTB8BQ8NAP8 495 aaPredicted RBP6.18□□□□□ -1.42
TDP1-209ENST00000554180 OR2T35Q8NGX2 323 aa6.18□□□□□ -1.42
TDP1-209ENST00000554180 FLYWCH2Q96CP2 140 aaKnown RBP6.18□□□□□ -1.42
TDP1-209ENST00000554180 R3HDM4Q96D70 268 aa6.18□□□□□ -1.42
TDP1-209ENST00000554180 OR10C1Q96KK4 312 aa6.18□□□□□ -1.42
TDP1-209ENST00000554180 RHOVQ96L33 236 aa6.18□□□□□ -1.42
TDP1-209ENST00000554180 HARBI1Q96MB7 349 aa6.18□□□□□ -1.42
TDP1-209ENST00000554180 FYTTD1Q96QD9 318 aaKnown RBP6.18□□□□□ -1.42
TDP1-209ENST00000554180 RNF5Q99942 180 aa6.18□□□□□ -1.42
TDP1-209ENST00000554180 RANBP3Q9H6Z4 567 aaPredicted RBP6.18□□□□□ -1.42
TDP1-209ENST00000554180 A0A0G2JRQ6 117 aa6.17□□□□□ -1.42
TDP1-209ENST00000554180 MPTX1A8MV57 137 aa6.17□□□□□ -1.42
TDP1-209ENST00000554180 FAM90A26D6RGX4 464 aa6.17□□□□□ -1.42
TDP1-209ENST00000554180 TIMM23O14925 209 aa6.17□□□□□ -1.42
TDP1-209ENST00000554180 SHOXO15266 292 aa6.17□□□□□ -1.42
TDP1-209ENST00000554180 SNAPC5O75971 98 aa6.17□□□□□ -1.42
TDP1-209ENST00000554180 SPDEFO95238 335 aa6.17□□□□□ -1.42
TDP1-209ENST00000554180 KRASP01116 189 aa6.17□□□□□ -1.42
TDP1-209ENST00000554180 C1QBP02746 253 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms