RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 ATP5IP56385 69 aaPredicted RBP8.84□□□□□ -0.99
PABPN1-203ENST00000553960 EBI3Q14213 229 aa8.84□□□□□ -0.99
PABPN1-203ENST00000553960 RTL8BQ17RB0 113 aa8.84□□□□□ -0.99
PABPN1-203ENST00000553960 Q5BKY6 102 aa8.84□□□□□ -0.99
PABPN1-203ENST00000553960 UTF1Q5T230 341 aa8.84□□□□□ -0.99
PABPN1-203ENST00000553960 GPR157Q5UAW9 335 aa8.84□□□□□ -0.99
PABPN1-203ENST00000553960 FAM53AQ6NSI3 398 aaPredicted RBP8.84□□□□□ -0.99
PABPN1-203ENST00000553960 BTNL3Q6UXE8 466 aa8.84□□□□□ -0.99
PABPN1-203ENST00000553960 C1orf229Q6ZS94 237 aaPredicted RBP8.84□□□□□ -0.99
PABPN1-203ENST00000553960 ACOT7LQ6ZUV0 252 aa8.84□□□□□ -0.99
PABPN1-203ENST00000553960 LYG1Q8N1E2 194 aa8.84□□□□□ -0.99
PABPN1-203ENST00000553960 OR4A5Q8NH83 315 aa8.84□□□□□ -0.99
PABPN1-203ENST00000553960 THAP6Q8TBB0 222 aa8.84□□□□□ -0.99
PABPN1-203ENST00000553960 TCTEX1D2Q8WW35 142 aa8.84□□□□□ -0.99
PABPN1-203ENST00000553960 RRNAD1Q96FB5 475 aaKnown RBP8.84□□□□□ -0.99
PABPN1-203ENST00000553960 WDR89Q96FK6 387 aaPredicted RBP8.84□□□□□ -0.99
PABPN1-203ENST00000553960 NABP2Q9BQ15 211 aa8.84□□□□□ -0.99
PABPN1-203ENST00000553960 PDCD10Q9BUL8 212 aa8.84□□□□□ -0.99
PABPN1-203ENST00000553960 LPAR2Q9HBW0 351 aa8.84□□□□□ -0.99
PABPN1-203ENST00000553960 BET1LQ9NYM9 111 aa8.84□□□□□ -0.99
PABPN1-203ENST00000553960 DPM3Q9P2X0 92 aa8.84□□□□□ -0.99
PABPN1-203ENST00000553960 HSPB7Q9UBY9 170 aa8.84□□□□□ -0.99
PABPN1-203ENST00000553960 ZNF257Q9Y2Q1 563 aa8.84□□□□□ -0.99
PABPN1-203ENST00000553960 TNCP24821 2201 aa8.83□□□□□ -1
PABPN1-203ENST00000553960 IGHV4-30-2A0A087WSY4 118 aa8.83□□□□□ -1
PABPN1-203ENST00000553960 IGHV4-61A0A0C4DH41 118 aa8.83□□□□□ -1
PABPN1-203ENST00000553960 MPTX1A8MV57 137 aa8.83□□□□□ -1
PABPN1-203ENST00000553960 LEUTXA8MZ59 168 aa8.83□□□□□ -1
PABPN1-203ENST00000553960 E5RGE8 158 aa8.83□□□□□ -1
PABPN1-203ENST00000553960 H0YIZ8 118 aa8.83□□□□□ -1
PABPN1-203ENST00000553960 RGS13O14921 159 aa8.83□□□□□ -1
PABPN1-203ENST00000553960 RAMP3O60896 148 aa8.83□□□□□ -1
PABPN1-203ENST00000553960 SIX6O95475 246 aa8.83□□□□□ -1
PABPN1-203ENST00000553960 MBPP02686 304 aaPredicted RBP8.83□□□□□ -1
PABPN1-203ENST00000553960 RLN2P04090 185 aa8.83□□□□□ -1
PABPN1-203ENST00000553960 EPHA1P21709 976 aa8.83□□□□□ -1
PABPN1-203ENST00000553960 CD1BP29016 333 aa8.83□□□□□ -1
PABPN1-203ENST00000553960 DYNLT3P51808 116 aa8.83□□□□□ -1
PABPN1-203ENST00000553960 DVL1P1P54792 670 aaPredicted RBP8.83□□□□□ -1
PABPN1-203ENST00000553960 LGALSLQ3ZCW2 172 aaPredicted RBP8.83□□□□□ -1
PABPN1-203ENST00000553960 RPL39P5Q59GN2 51 aa8.83□□□□□ -1
PABPN1-203ENST00000553960 THOC7Q6I9Y2 204 aaKnown RBP8.83□□□□□ -1
PABPN1-203ENST00000553960 CCDC144NLQ6NUI1 221 aa8.83□□□□□ -1
PABPN1-203ENST00000553960 STPG2Q8N412 459 aa8.83□□□□□ -1
PABPN1-203ENST00000553960 KCNRGQ8N5I3 272 aa8.83□□□□□ -1
PABPN1-203ENST00000553960 OR4C13Q8NGP0 309 aa8.83□□□□□ -1
PABPN1-203ENST00000553960 OR10X1Q8NGY0 326 aa8.83□□□□□ -1
PABPN1-203ENST00000553960 GPR146Q96CH1 333 aa8.83□□□□□ -1
PABPN1-203ENST00000553960 RAB40CQ96S21 281 aa8.83□□□□□ -1
PABPN1-203ENST00000553960 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.83□□□□□ -1
PABPN1-203ENST00000553960 NSG2Q9Y328 171 aa8.83□□□□□ -1
PABPN1-203ENST00000553960 WSB1Q9Y6I7 421 aa8.83□□□□□ -1
PABPN1-203ENST00000553960 ARHGAP32A7KAX9 2087 aa8.83□□□□□ -1
PABPN1-203ENST00000553960 RNF222A6NCQ9 220 aa8.82□□□□□ -1
PABPN1-203ENST00000553960 A8MV72 311 aaPredicted RBP8.82□□□□□ -1
PABPN1-203ENST00000553960 CCSO14618 274 aa8.82□□□□□ -1
PABPN1-203ENST00000553960 TNFSF12O43508 249 aa8.82□□□□□ -1
PABPN1-203ENST00000553960 SPDEFO95238 335 aa8.82□□□□□ -1
PABPN1-203ENST00000553960 APOA2P02652 100 aa8.82□□□□□ -1
PABPN1-203ENST00000553960 HTR1DP28221 377 aa8.82□□□□□ -1
PABPN1-203ENST00000553960 NKX2-1P43699 371 aaPredicted RBP8.82□□□□□ -1
PABPN1-203ENST00000553960 P2RY1P47900 373 aa8.82□□□□□ -1
PABPN1-203ENST00000553960 AANATQ16613 207 aa8.82□□□□□ -1
PABPN1-203ENST00000553960 CLEC12BQ2HXU8 276 aa8.82□□□□□ -1
PABPN1-203ENST00000553960 ZNF546Q86UE3 836 aa8.82□□□□□ -1
PABPN1-203ENST00000553960 THNSL2Q86YJ6 484 aa8.82□□□□□ -1
PABPN1-203ENST00000553960 TGIF2LXQ8IUE1 241 aa8.82□□□□□ -1
PABPN1-203ENST00000553960 VSTM2AQ8TAG5 236 aa8.82□□□□□ -1
PABPN1-203ENST00000553960 MALSU1Q96EH3 234 aa8.82□□□□□ -1
PABPN1-203ENST00000553960 RHOVQ96L33 236 aa8.82□□□□□ -1
PABPN1-203ENST00000553960 FOXC2Q99958 501 aa8.82□□□□□ -1
PABPN1-203ENST00000553960 TMEM14BQ9NUH8 114 aa8.82□□□□□ -1
PABPN1-203ENST00000553960 FKBP11Q9NYL4 201 aa8.82□□□□□ -1
PABPN1-203ENST00000553960 WASHC3Q9Y3C0 194 aa8.82□□□□□ -1
PABPN1-203ENST00000553960 POLQO75417 2590 aa8.81□□□□□ -1
PABPN1-203ENST00000553960 GCN1Q92616 2671 aaKnown RBP8.81□□□□□ -1
PABPN1-203ENST00000553960 A0A0G2JRQ6 117 aa8.81□□□□□ -1
PABPN1-203ENST00000553960 C13orf42A0A1B0GVH6 325 aa8.81□□□□□ -1
PABPN1-203ENST00000553960 K7EPK0 472 aa8.81□□□□□ -1
PABPN1-203ENST00000553960 TAAR5O14804 337 aa8.81□□□□□ -1
PABPN1-203ENST00000553960 MED6O75586 246 aa8.81□□□□□ -1
PABPN1-203ENST00000553960 S1PR2O95136 353 aa8.81□□□□□ -1
PABPN1-203ENST00000553960 MSMBP08118 114 aa8.81□□□□□ -1
PABPN1-203ENST00000553960 ARF6P62330 175 aa8.81□□□□□ -1
PABPN1-203ENST00000553960 RAB32Q13637 225 aa8.81□□□□□ -1
PABPN1-203ENST00000553960 Q6ZRM9 215 aa8.81□□□□□ -1
PABPN1-203ENST00000553960 KRTAP1-3Q8IUG1 177 aa8.81□□□□□ -1
PABPN1-203ENST00000553960 TEX45Q8NA69 505 aa8.81□□□□□ -1
PABPN1-203ENST00000553960 DMBX1Q8NFW5 382 aa8.81□□□□□ -1
PABPN1-203ENST00000553960 LHX4Q969G2 390 aa8.81□□□□□ -1
PABPN1-203ENST00000553960 R3HDM4Q96D70 268 aa8.81□□□□□ -1
PABPN1-203ENST00000553960 SMIM8Q96KF7 97 aa8.81□□□□□ -1
PABPN1-203ENST00000553960 CIB3Q96Q77 187 aaPredicted RBP8.81□□□□□ -1
PABPN1-203ENST00000553960 TBX15Q96SF7 602 aa8.81□□□□□ -1
PABPN1-203ENST00000553960 CHIAQ9BZP6 476 aa8.81□□□□□ -1
PABPN1-203ENST00000553960 SLA2Q9H6Q3 261 aa8.81□□□□□ -1
PABPN1-203ENST00000553960 FOXA2Q9Y261 457 aaPredicted RBP8.81□□□□□ -1
PABPN1-203ENST00000553960 RCL1Q9Y2P8 373 aaKnown RBP8.81□□□□□ -1
PABPN1-203ENST00000553960 IGHV1-3A0A0C4DH29 117 aa8.8□□□□□ -1
PABPN1-203ENST00000553960 A0A1W2PPI3 338 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms