RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 COPZ2Q9P299 210 aa9.78□□□□□ -0.84
SHMT2-209ENST00000553949 NF1P21359 2839 aa9.78□□□□□ -0.84
SHMT2-209ENST00000553949 FAM181BA6NEQ2 426 aa9.77□□□□□ -0.85
SHMT2-209ENST00000553949 NDUFB6O95139 128 aa9.77□□□□□ -0.85
SHMT2-209ENST00000553949 CRYZL1O95825 349 aa9.77□□□□□ -0.85
SHMT2-209ENST00000553949 F2RP25116 425 aa9.77□□□□□ -0.85
SHMT2-209ENST00000553949 F2RL1P55085 397 aa9.77□□□□□ -0.85
SHMT2-209ENST00000553949 CBX3Q13185 183 aa9.77□□□□□ -0.85
SHMT2-209ENST00000553949 DHRS7BQ6IAN0 325 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-209ENST00000553949 MZT2BQ6NZ67 158 aa9.77□□□□□ -0.85
SHMT2-209ENST00000553949 C16orf82Q7Z2V1 217 aa9.77□□□□□ -0.85
SHMT2-209ENST00000553949 SPAG16Q8N0X2 631 aa9.77□□□□□ -0.85
SHMT2-209ENST00000553949 CCDC71LQ8N9Z2 235 aa9.77□□□□□ -0.85
SHMT2-209ENST00000553949 POC5Q8NA72 575 aa9.77□□□□□ -0.85
SHMT2-209ENST00000553949 OR4C13Q8NGP0 309 aa9.77□□□□□ -0.85
SHMT2-209ENST00000553949 OR4S2Q8NH73 311 aa9.77□□□□□ -0.85
SHMT2-209ENST00000553949 RNF5Q99942 180 aa9.77□□□□□ -0.85
SHMT2-209ENST00000553949 PLSCR3Q9NRY6 295 aa9.77□□□□□ -0.85
SHMT2-209ENST00000553949 LIN7CQ9NUP9 197 aaKnown RBP9.77□□□□□ -0.85
SHMT2-209ENST00000553949 MOB4Q9Y3A3 225 aa9.77□□□□□ -0.85
SHMT2-209ENST00000553949 NCBP2LA6PVI3 153 aaKnown RBP9.76□□□□□ -0.85
SHMT2-209ENST00000553949 RBFOX2O43251 390 aaKnown RBP eCLIP9.76□□□□□ -0.855e-15■■■■■ 33.3
SHMT2-209ENST00000553949 RAMP3O60896 148 aa9.76□□□□□ -0.85
SHMT2-209ENST00000553949 PEX14O75381 377 aa9.76□□□□□ -0.85
SHMT2-209ENST00000553949 CNTFRP26992 372 aa9.76□□□□□ -0.85
SHMT2-209ENST00000553949 SLC6A1P30531 599 aa9.76□□□□□ -0.85
SHMT2-209ENST00000553949 DEFA1P59665 94 aa9.76□□□□□ -0.85
SHMT2-209ENST00000553949 DEFA3P59666 94 aa9.76□□□□□ -0.85
SHMT2-209ENST00000553949 RPS16P62249 146 aaKnown RBP9.76□□□□□ -0.85
SHMT2-209ENST00000553949 TMEM177Q53S58 311 aa9.76□□□□□ -0.85
SHMT2-209ENST00000553949 TMED4Q7Z7H5 227 aa9.76□□□□□ -0.85
SHMT2-209ENST00000553949 ADAD2Q8NCV1 583 aaKnown RBP9.76□□□□□ -0.85
SHMT2-209ENST00000553949 OR8H1Q8NGG4 311 aa9.76□□□□□ -0.85
SHMT2-209ENST00000553949 OSR1Q8TAX0 266 aaPredicted RBP9.76□□□□□ -0.85
SHMT2-209ENST00000553949 CD300LFQ8TDQ1 290 aa9.76□□□□□ -0.85
SHMT2-209ENST00000553949 HARBI1Q96MB7 349 aa9.76□□□□□ -0.85
SHMT2-209ENST00000553949 C1RLQ9NZP8 487 aa9.76□□□□□ -0.85
SHMT2-209ENST00000553949 JMJD1CQ15652 2540 aa9.75□□□□□ -0.85
SHMT2-209ENST00000553949 C3orf85A0A1B0GTC6 90 aa9.75□□□□□ -0.85
SHMT2-209ENST00000553949 FAM240BA0A1B0GVZ2 78 aa9.75□□□□□ -0.85
SHMT2-209ENST00000553949 CRYM-AS1A6NIL9 109 aa9.75□□□□□ -0.85
SHMT2-209ENST00000553949 H0Y980 276 aa9.75□□□□□ -0.85
SHMT2-209ENST00000553949 M0QZK8 103 aa9.75□□□□□ -0.85
SHMT2-209ENST00000553949 SHOXO15266 292 aa9.75□□□□□ -0.85
SHMT2-209ENST00000553949 NBR2O15453 112 aa9.75□□□□□ -0.85
SHMT2-209ENST00000553949 AMY1AP04745 511 aa9.75□□□□□ -0.85
SHMT2-209ENST00000553949 VSIG10L2P0DP72 767 aa9.75□□□□□ -0.85
SHMT2-209ENST00000553949 LGALS7P47929 136 aa9.75□□□□□ -0.85
SHMT2-209ENST00000553949 RPL15P61313 204 aaKnown RBP9.75□□□□□ -0.85
SHMT2-209ENST00000553949 MMDQ15546 238 aa9.75□□□□□ -0.85
SHMT2-209ENST00000553949 TCTEX1D1Q8N7M0 179 aa9.75□□□□□ -0.85
SHMT2-209ENST00000553949 C5orf56Q8N8D9 126 aa9.75□□□□□ -0.85
SHMT2-209ENST00000553949 NPBQ8NG41 125 aa9.75□□□□□ -0.85
SHMT2-209ENST00000553949 ZFAND2BQ8WV99 257 aa9.75□□□□□ -0.85
SHMT2-209ENST00000553949 TMEM230Q96A57 120 aa9.75□□□□□ -0.85
SHMT2-209ENST00000553949 TSNAXQ99598 290 aaKnown RBP9.75□□□□□ -0.85
SHMT2-209ENST00000553949 NAA60Q9H7X0 242 aa9.75□□□□□ -0.85
SHMT2-209ENST00000553949 PALMDQ9NP74 551 aa9.75□□□□□ -0.85
SHMT2-209ENST00000553949 SETD2Q9BYW2 2564 aaPredicted RBP9.75□□□□□ -0.85
SHMT2-209ENST00000553949 TEX13DA0A0J9YY54 714 aaPredicted RBP9.74□□□□□ -0.85
SHMT2-209ENST00000553949 SRRM4A7MD48 611 aaKnown RBP9.74□□□□□ -0.85
SHMT2-209ENST00000553949 FGF16O43320 207 aa9.74□□□□□ -0.85
SHMT2-209ENST00000553949 NDUFA3O95167 84 aa9.74□□□□□ -0.85
SHMT2-209ENST00000553949 SPDEFO95238 335 aa9.74□□□□□ -0.85
SHMT2-209ENST00000553949 HPRT1P00492 218 aa9.74□□□□□ -0.85
SHMT2-209ENST00000553949 IGLV2-23P01705 113 aa9.74□□□□□ -0.85
SHMT2-209ENST00000553949 TCRBP04435 133 aa9.74□□□□□ -0.85
SHMT2-209ENST00000553949 CRYBA1P05813 215 aa9.74□□□□□ -0.85
SHMT2-209ENST00000553949 AKR1C4P17516 323 aa9.74□□□□□ -0.85
SHMT2-209ENST00000553949 LPAR6P43657 344 aa9.74□□□□□ -0.85
SHMT2-209ENST00000553949 BLCAPP62952 87 aa9.74□□□□□ -0.85
SHMT2-209ENST00000553949 PSG5Q15238 335 aa9.74□□□□□ -0.85
SHMT2-209ENST00000553949 ZNF585BQ52M93 769 aa9.74□□□□□ -0.85
SHMT2-209ENST00000553949 C11orf88Q6PI97 169 aa9.74□□□□□ -0.85
SHMT2-209ENST00000553949 CENPSQ8N2Z9 138 aa9.74□□□□□ -0.85
SHMT2-209ENST00000553949 FAM71E2Q8N5Q1 922 aa9.74□□□□□ -0.85
SHMT2-209ENST00000553949 Q8N9W7 124 aa9.74□□□□□ -0.85
SHMT2-209ENST00000553949 ENKURQ8TC29 256 aa9.74□□□□□ -0.85
SHMT2-209ENST00000553949 TP53RKQ96S44 253 aa9.74□□□□□ -0.85
SHMT2-209ENST00000553949 NPFFR1Q9GZQ6 430 aa9.74□□□□□ -0.85
SHMT2-209ENST00000553949 C20orf85Q9H1P6 137 aa9.74□□□□□ -0.85
SHMT2-209ENST00000553949 PLEKHA2Q9HB19 425 aa9.74□□□□□ -0.85
SHMT2-209ENST00000553949 FAM212BQ9NTI7 297 aaPredicted RBP9.74□□□□□ -0.85
SHMT2-209ENST00000553949 KIAA1456Q9P272 454 aa9.74□□□□□ -0.85
SHMT2-209ENST00000553949 FLVCR2Q9UPI3 526 aa9.74□□□□□ -0.85
SHMT2-209ENST00000553949 SH2D7A6NKC9 451 aaPredicted RBP9.73□□□□□ -0.85
SHMT2-209ENST00000553949 RRHO14718 337 aa9.73□□□□□ -0.85
SHMT2-209ENST00000553949 ARPC1BO15143 372 aaKnown RBP9.73□□□□□ -0.85
SHMT2-209ENST00000553949 SLC25A17O43808 307 aa9.73□□□□□ -0.85
SHMT2-209ENST00000553949 B3GALNT1O75752 331 aa9.73□□□□□ -0.85
SHMT2-209ENST00000553949 S1PR2O95136 353 aa9.73□□□□□ -0.85
SHMT2-209ENST00000553949 SERPINE2P07093 398 aa9.73□□□□□ -0.85
SHMT2-209ENST00000553949 OR5AC1P0C628 307 aa9.73□□□□□ -0.85
SHMT2-209ENST00000553949 TAS2R31P59538 309 aa9.73□□□□□ -0.85
SHMT2-209ENST00000553949 UBE2KP61086 200 aa9.73□□□□□ -0.85
SHMT2-209ENST00000553949 C5orf64Q2M2E5 130 aa9.73□□□□□ -0.85
SHMT2-209ENST00000553949 SP6Q3SY56 376 aa9.73□□□□□ -0.85
SHMT2-209ENST00000553949 TMEM128Q5BJH2 165 aa9.73□□□□□ -0.85
SHMT2-209ENST00000553949 NRARPQ7Z6K4 114 aa9.73□□□□□ -0.85
SHMT2-209ENST00000553949 SLC25A42Q86VD7 318 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms