RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 FCGR3BO75015 233 aa10.49□□□□□ -0.73
VIPAS39-206ENST00000553888 SOD3P08294 240 aa10.49□□□□□ -0.73
VIPAS39-206ENST00000553888 TMEM267Q0VDI3 215 aaPredicted RBP10.49□□□□□ -0.73
VIPAS39-206ENST00000553888 TOR2AQ5JU69 321 aa10.49□□□□□ -0.73
VIPAS39-206ENST00000553888 SAPCD1Q5SSQ6 148 aa10.49□□□□□ -0.73
VIPAS39-206ENST00000553888 ZBTB34Q8NCN2 500 aa10.49□□□□□ -0.73
VIPAS39-206ENST00000553888 EDARADDQ8WWZ3 215 aa10.49□□□□□ -0.73
VIPAS39-206ENST00000553888 LRRC46Q96FV0 321 aa10.49□□□□□ -0.73
VIPAS39-206ENST00000553888 BARX1Q9HBU1 254 aaPredicted RBP10.49□□□□□ -0.73
VIPAS39-206ENST00000553888 SAA2-SAA4A0A096LPE2 208 aa10.48□□□□□ -0.73
VIPAS39-206ENST00000553888 A0A1B0GU03 582 aa10.48□□□□□ -0.73
VIPAS39-206ENST00000553888 SAA2P0DJI9 122 aaPredicted RBP10.48□□□□□ -0.73
VIPAS39-206ENST00000553888 VAMP2P63027 116 aa10.48□□□□□ -0.73
VIPAS39-206ENST00000553888 CATR1Q13166 79 aa10.48□□□□□ -0.73
VIPAS39-206ENST00000553888 TMEM200BQ69YZ2 307 aa10.48□□□□□ -0.73
VIPAS39-206ENST00000553888 SSX9Q7RTT3 188 aa10.48□□□□□ -0.73
VIPAS39-206ENST00000553888 LYG1Q8N1E2 194 aa10.48□□□□□ -0.73
VIPAS39-206ENST00000553888 LSM10Q969L4 123 aaKnown RBP10.48□□□□□ -0.73
VIPAS39-206ENST00000553888 GPR61Q9BZJ8 451 aa10.48□□□□□ -0.73
VIPAS39-206ENST00000553888 SH3BGRL3Q9H299 93 aa10.48□□□□□ -0.73
VIPAS39-206ENST00000553888 IDI2-AS1Q9NZ38 188 aa10.48□□□□□ -0.73
VIPAS39-206ENST00000553888 NUP50Q9UKX7 468 aa10.48□□□□□ -0.73
VIPAS39-206ENST00000553888 HFEQ30201 348 aa10.48□□□□□ -0.73
VIPAS39-206ENST00000553888 TMEM252Q8N6L7 170 aa10.48□□□□□ -0.73
VIPAS39-206ENST00000553888 SLC25A32Q9H2D1 315 aa10.48□□□□□ -0.73
VIPAS39-206ENST00000553888 TREM1Q9NP99 234 aa10.48□□□□□ -0.73
VIPAS39-206ENST00000553888 CSMD1Q96PZ7 3565 aa10.48□□□□□ -0.73
VIPAS39-206ENST00000553888 TUSC1Q2TAM9 212 aa10.47□□□□□ -0.73
VIPAS39-206ENST00000553888 PHYHIPLQ96FC7 376 aa10.47□□□□□ -0.73
VIPAS39-206ENST00000553888 LYRM2Q9NU23 88 aaPredicted RBP10.47□□□□□ -0.73
VIPAS39-206ENST00000553888 MED13LQ71F56 2210 aa10.47□□□□□ -0.73
VIPAS39-206ENST00000553888 PRB1P04280 392 aa10.47□□□□□ -0.73
VIPAS39-206ENST00000553888 FAM157CP0CG43 387 aa10.47□□□□□ -0.73
VIPAS39-206ENST00000553888 Q5PR19 223 aa10.47□□□□□ -0.73
VIPAS39-206ENST00000553888 HSD17B11Q8NBQ5 300 aa10.47□□□□□ -0.73
VIPAS39-206ENST00000553888 ZNF439Q8NDP4 499 aa10.47□□□□□ -0.73
VIPAS39-206ENST00000553888 OR1S2Q8NGQ3 325 aa10.47□□□□□ -0.73
VIPAS39-206ENST00000553888 HSD17B10Q99714 261 aaKnown RBP10.47□□□□□ -0.73
VIPAS39-206ENST00000553888 SAV1Q9H4B6 383 aaPredicted RBP10.47□□□□□ -0.73
VIPAS39-206ENST00000553888 TNCP24821 2201 aa10.47□□□□□ -0.73
VIPAS39-206ENST00000553888 CRYBG3Q68DQ2 2970 aa10.47□□□□□ -0.73
VIPAS39-206ENST00000553888 A0A1B0GV90 55 aa10.47□□□□□ -0.73
VIPAS39-206ENST00000553888 hADV38S2A0JD32 116 aa10.47□□□□□ -0.73
VIPAS39-206ENST00000553888 MFSD2BA6NFX1 497 aa10.47□□□□□ -0.73
VIPAS39-206ENST00000553888 ZNF729A6NN14 1252 aaPredicted RBP10.47□□□□□ -0.73
VIPAS39-206ENST00000553888 NDUFB3O43676 98 aa10.47□□□□□ -0.73
VIPAS39-206ENST00000553888 FABP1P07148 127 aa10.47□□□□□ -0.73
VIPAS39-206ENST00000553888 PLA2G5P39877 138 aa10.47□□□□□ -0.73
VIPAS39-206ENST00000553888 RPS16P62249 146 aaKnown RBP10.47□□□□□ -0.73
VIPAS39-206ENST00000553888 C4orf17Q53FE4 359 aa10.47□□□□□ -0.73
VIPAS39-206ENST00000553888 NANPQ8TBE9 248 aa10.47□□□□□ -0.73
VIPAS39-206ENST00000553888 MMP24Q9Y5R2 645 aa10.47□□□□□ -0.73
VIPAS39-206ENST00000553888 TAAR5O14804 337 aa10.46□□□□□ -0.73
VIPAS39-206ENST00000553888 P0C879 139 aa10.46□□□□□ -0.73
VIPAS39-206ENST00000553888 PVALBP20472 110 aaPredicted RBP10.46□□□□□ -0.73
VIPAS39-206ENST00000553888 DYNLT3P51808 116 aa10.46□□□□□ -0.73
VIPAS39-206ENST00000553888 OR2B8PP59922 312 aa10.46□□□□□ -0.73
VIPAS39-206ENST00000553888 GPR157Q5UAW9 335 aa10.46□□□□□ -0.73
VIPAS39-206ENST00000553888 ZNF66Q6ZN08 573 aa10.46□□□□□ -0.73
VIPAS39-206ENST00000553888 OR5C1Q8NGR4 320 aa10.46□□□□□ -0.73
VIPAS39-206ENST00000553888 ZNF251Q9BRH9 671 aa10.46□□□□□ -0.73
VIPAS39-206ENST00000553888 LINC00312Q9Y6C7 94 aa10.46□□□□□ -0.73
VIPAS39-206ENST00000553888 TMEM8BA6NDV4 472 aa10.46□□□□□ -0.74
VIPAS39-206ENST00000553888 MIDNQ504T8 468 aa10.46□□□□□ -0.74
VIPAS39-206ENST00000553888 CORO2AQ92828 525 aa10.46□□□□□ -0.74
VIPAS39-206ENST00000553888 ZDHHC16Q969W1 377 aa10.46□□□□□ -0.74
VIPAS39-206ENST00000553888 RPUSD1Q9UJJ7 312 aaKnown RBP10.46□□□□□ -0.74
VIPAS39-206ENST00000553888 LAMP3Q9UQV4 416 aa10.46□□□□□ -0.74
VIPAS39-206ENST00000553888 MARCH11A6NNE9 402 aa10.45□□□□□ -0.74
VIPAS39-206ENST00000553888 SYNGR2O43760 224 aa10.45□□□□□ -0.74
VIPAS39-206ENST00000553888 C1QL1O75973 258 aa10.45□□□□□ -0.74
VIPAS39-206ENST00000553888 SNRNP70P08621 437 aaKnown RBP10.45□□□□□ -0.74
VIPAS39-206ENST00000553888 OR9G9P0C7N8 305 aa10.45□□□□□ -0.74
VIPAS39-206ENST00000553888 LRRC10Q5BKY1 277 aa10.45□□□□□ -0.74
VIPAS39-206ENST00000553888 ZNF714Q96N38 554 aa10.45□□□□□ -0.74
VIPAS39-206ENST00000553888 USP9XQ93008 2570 aaPredicted RBP10.45□□□□□ -0.74
VIPAS39-206ENST00000553888 TRAV3A0A0B4J244 114 aa10.45□□□□□ -0.74
VIPAS39-206ENST00000553888 ZNF705EA8MWA4 302 aaPredicted RBP10.45□□□□□ -0.74
VIPAS39-206ENST00000553888 NDUFS7O75251 213 aa10.45□□□□□ -0.74
VIPAS39-206ENST00000553888 SLC25A6P12236 298 aa10.45□□□□□ -0.74
VIPAS39-206ENST00000553888 ARL16Q0P5N6 197 aa10.45□□□□□ -0.74
VIPAS39-206ENST00000553888 ETFRF1Q6IPR1 90 aa10.45□□□□□ -0.74
VIPAS39-206ENST00000553888 R3HDM4Q96D70 268 aa10.45□□□□□ -0.74
VIPAS39-206ENST00000553888 RBKSQ9H477 322 aa10.45□□□□□ -0.74
VIPAS39-206ENST00000553888 FGF16O43320 207 aa10.44□□□□□ -0.74
VIPAS39-206ENST00000553888 JTBO76095 146 aa10.44□□□□□ -0.74
VIPAS39-206ENST00000553888 METTL15P1P0C7V9 234 aa10.44□□□□□ -0.74
VIPAS39-206ENST00000553888 FHITP49789 147 aa10.44□□□□□ -0.74
VIPAS39-206ENST00000553888 MRPS11P82912 194 aaKnown RBP10.44□□□□□ -0.74
VIPAS39-206ENST00000553888 AKR1C1Q04828 323 aa10.44□□□□□ -0.74
VIPAS39-206ENST00000553888 DIAPH2-AS1Q14236 149 aa10.44□□□□□ -0.74
VIPAS39-206ENST00000553888 H2BFWTQ7Z2G1 175 aa10.44□□□□□ -0.74
VIPAS39-206ENST00000553888 ZNF383Q8NA42 475 aa10.44□□□□□ -0.74
VIPAS39-206ENST00000553888 LINC00052Q96N35 136 aa10.44□□□□□ -0.74
VIPAS39-206ENST00000553888 RBMXL2O75526 392 aaKnown RBP10.44□□□□□ -0.74
VIPAS39-206ENST00000553888 F12P00748 615 aaPredicted RBP10.44□□□□□ -0.74
VIPAS39-206ENST00000553888 MBP02144 154 aa10.44□□□□□ -0.74
VIPAS39-206ENST00000553888 GAPDHP04406 335 aaKnown RBP10.44□□□□□ -0.74
VIPAS39-206ENST00000553888 CDKN1AP38936 164 aa10.44□□□□□ -0.74
VIPAS39-206ENST00000553888 REG1BP48304 166 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms