RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 ECSCRQ19T08 205 aa13.11□□□□□ -0.31
ARHGEF40-202ENST00000553709 IDI2-AS1Q9NZ38 188 aa13.11□□□□□ -0.31
ARHGEF40-202ENST00000553709 TMSB15BA0A087X1C1 80 aa13.11□□□□□ -0.31
ARHGEF40-202ENST00000553709 SLC35B1P78383 322 aa13.11□□□□□ -0.31
ARHGEF40-202ENST00000553709 IBA57Q5T440 356 aaKnown RBP13.11□□□□□ -0.31
ARHGEF40-202ENST00000553709 A8MWL6 223 aa13.1□□□□□ -0.31
ARHGEF40-202ENST00000553709 J3QW42 95 aa13.1□□□□□ -0.31
ARHGEF40-202ENST00000553709 SNRPCP09234 159 aaKnown RBP13.1□□□□□ -0.31
ARHGEF40-202ENST00000553709 SP9P0CG40 484 aa13.1□□□□□ -0.31
ARHGEF40-202ENST00000553709 TMEM208Q9BTX3 173 aa13.1□□□□□ -0.31
ARHGEF40-202ENST00000553709 IL17BQ9UHF5 180 aa13.1□□□□□ -0.31
ARHGEF40-202ENST00000553709 TGIF2-C20orf24A0A0A6YYL0 155 aa13.1□□□□□ -0.31
ARHGEF40-202ENST00000553709 IGHV3-72A0A0B4J1Y9 119 aa13.1□□□□□ -0.31
ARHGEF40-202ENST00000553709 ADAM11O75078 769 aa13.1□□□□□ -0.31
ARHGEF40-202ENST00000553709 SUCLG1P53597 346 aaKnown RBP13.1□□□□□ -0.31
ARHGEF40-202ENST00000553709 TMEM45BQ96B21 275 aa13.1□□□□□ -0.31
ARHGEF40-202ENST00000553709 ZNF362Q5T0B9 420 aaPredicted RBP13.1□□□□□ -0.31
ARHGEF40-202ENST00000553709 ZNF343Q6P1L6 599 aa13.1□□□□□ -0.31
ARHGEF40-202ENST00000553709 DRAM1Q8N682 238 aa13.1□□□□□ -0.31
ARHGEF40-202ENST00000553709 SCNM1Q9BWG6 230 aa13.1□□□□□ -0.31
ARHGEF40-202ENST00000553709 hCG_38984A0A1B0GV85 526 aa13.1□□□□□ -0.31
ARHGEF40-202ENST00000553709 GFRA3O60609 400 aa13.1□□□□□ -0.31
ARHGEF40-202ENST00000553709 RFPL3SP0C7P2 107 aa13.1□□□□□ -0.31
ARHGEF40-202ENST00000553709 GLIPR1P48060 266 aa13.1□□□□□ -0.31
ARHGEF40-202ENST00000553709 MMD2Q8IY49 270 aa13.1□□□□□ -0.31
ARHGEF40-202ENST00000553709 WDR31Q8NA23 367 aa13.1□□□□□ -0.31
ARHGEF40-202ENST00000553709 ZNF552Q9H707 407 aaPredicted RBP13.1□□□□□ -0.31
ARHGEF40-202ENST00000553709 J3KRW8 73 aa13.09□□□□□ -0.31
ARHGEF40-202ENST00000553709 GPR6P46095 362 aaPredicted RBP13.09□□□□□ -0.31
ARHGEF40-202ENST00000553709 TMPRSS3P57727 454 aa13.09□□□□□ -0.31
ARHGEF40-202ENST00000553709 DPF1Q92782 380 aa13.09□□□□□ -0.31
ARHGEF40-202ENST00000553709 SYNGR3O43761 229 aa13.09□□□□□ -0.31
ARHGEF40-202ENST00000553709 CTSSP25774 331 aa13.09□□□□□ -0.31
ARHGEF40-202ENST00000553709 C2orf68Q2NKX9 166 aa13.09□□□□□ -0.31
ARHGEF40-202ENST00000553709 ZNF430Q9H8G1 570 aaPredicted RBP13.09□□□□□ -0.31
ARHGEF40-202ENST00000553709 CD99P14209 185 aa13.09□□□□□ -0.31
ARHGEF40-202ENST00000553709 HCP5Q6MZN7 132 aa13.09□□□□□ -0.31
ARHGEF40-202ENST00000553709 CALHM1Q8IU99 346 aa13.09□□□□□ -0.31
ARHGEF40-202ENST00000553709 MSGN1A6NI15 193 aa13.08□□□□□ -0.31
ARHGEF40-202ENST00000553709 RPLP1P05386 114 aaKnown RBP13.08□□□□□ -0.31
ARHGEF40-202ENST00000553709 RSPO4Q2I0M5 234 aaPredicted RBP13.08□□□□□ -0.31
ARHGEF40-202ENST00000553709 OR8A1Q8NGG7 326 aa13.08□□□□□ -0.31
ARHGEF40-202ENST00000553709 OR1P1Q8NH06 330 aa13.08□□□□□ -0.31
ARHGEF40-202ENST00000553709 SNCGO76070 127 aa13.08□□□□□ -0.32
ARHGEF40-202ENST00000553709 ZNF735P0CB33 412 aa13.08□□□□□ -0.32
ARHGEF40-202ENST00000553709 METTL1Q9UBP6 276 aaKnown RBP13.08□□□□□ -0.32
ARHGEF40-202ENST00000553709 KCNMB2Q9Y691 235 aa13.08□□□□□ -0.32
ARHGEF40-202ENST00000553709 IGKV3-7A0A075B6H7 116 aa13.08□□□□□ -0.32
ARHGEF40-202ENST00000553709 ATP1A1-AS1Q5TC04 95 aa13.08□□□□□ -0.32
ARHGEF40-202ENST00000553709 TIMP4Q99727 224 aa13.08□□□□□ -0.32
ARHGEF40-202ENST00000553709 HSPB9Q9BQS6 159 aa13.08□□□□□ -0.32
ARHGEF40-202ENST00000553709 TCF19Q9Y242 345 aa13.08□□□□□ -0.32
ARHGEF40-202ENST00000553709 RHBDL1O75783 438 aa13.08□□□□□ -0.32
ARHGEF40-202ENST00000553709 EIF3GO75821 320 aaKnown RBP eCLIP13.08□□□□□ -0.32
ARHGEF40-202ENST00000553709 PLAUP00749 431 aa13.08□□□□□ -0.32
ARHGEF40-202ENST00000553709 IGFBP3P17936 291 aaPredicted RBP13.08□□□□□ -0.32
ARHGEF40-202ENST00000553709 LRRC75BQ2VPJ9 315 aa13.08□□□□□ -0.32
ARHGEF40-202ENST00000553709 WDR25Q64LD2 544 aaPredicted RBP13.08□□□□□ -0.32
ARHGEF40-202ENST00000553709 TNFRSF19Q9NS68 423 aa13.08□□□□□ -0.32
ARHGEF40-202ENST00000553709 ARL14EPLP0DKL9 152 aa13.07□□□□□ -0.32
ARHGEF40-202ENST00000553709 CD40P25942 277 aa13.07□□□□□ -0.32
ARHGEF40-202ENST00000553709 RND2P52198 227 aa13.07□□□□□ -0.32
ARHGEF40-202ENST00000553709 APC2O95996 2303 aa13.07□□□□□ -0.32
ARHGEF40-202ENST00000553709 BTCP35070 178 aa13.07□□□□□ -0.32
ARHGEF40-202ENST00000553709 LYRM7Q5U5X0 104 aa13.07□□□□□ -0.32
ARHGEF40-202ENST00000553709 HIST1H2BAQ96A08 127 aa13.07□□□□□ -0.32
ARHGEF40-202ENST00000553709 GALNT14Q96FL9 552 aa13.07□□□□□ -0.32
ARHGEF40-202ENST00000553709 PSMG3Q9BT73 122 aaPredicted RBP13.07□□□□□ -0.32
ARHGEF40-202ENST00000553709 ZNF703Q9H7S9 590 aaPredicted RBP13.07□□□□□ -0.32
ARHGEF40-202ENST00000553709 HILPDAQ9Y5L2 63 aa13.07□□□□□ -0.32
ARHGEF40-202ENST00000553709 LYPD3O95274 346 aa13.07□□□□□ -0.32
ARHGEF40-202ENST00000553709 RPL7P18124 248 aaKnown RBP13.07□□□□□ -0.32
ARHGEF40-202ENST00000553709 PCP4P48539 62 aa13.07□□□□□ -0.32
ARHGEF40-202ENST00000553709 HOXA4Q00056 320 aaPredicted RBP13.07□□□□□ -0.32
ARHGEF40-202ENST00000553709 MRPL37Q9BZE1 423 aaKnown RBP13.07□□□□□ -0.32
ARHGEF40-202ENST00000553709 PRDM6Q9NQX0 595 aa13.07□□□□□ -0.32
ARHGEF40-202ENST00000553709 A0A1B0GTI1 187 aa13.07□□□□□ -0.32
ARHGEF40-202ENST00000553709 FOXJ2Q9P0K8 574 aa13.07□□□□□ -0.32
ARHGEF40-202ENST00000553709 NDUFA2O43678 99 aa13.06□□□□□ -0.32
ARHGEF40-202ENST00000553709 ZIC3O60481 467 aa13.06□□□□□ -0.32
ARHGEF40-202ENST00000553709 GCGP01275 180 aa13.06□□□□□ -0.32
ARHGEF40-202ENST00000553709 HLA-DQA1P01909 254 aa13.06□□□□□ -0.32
ARHGEF40-202ENST00000553709 AGAP20933 346 aa13.06□□□□□ -0.32
ARHGEF40-202ENST00000553709 SLC35E4Q6ICL7 350 aa13.06□□□□□ -0.32
ARHGEF40-202ENST00000553709 SLC25A33Q9BSK2 321 aa13.06□□□□□ -0.32
ARHGEF40-202ENST00000553709 ELOVL1Q9BW60 279 aa13.06□□□□□ -0.32
ARHGEF40-202ENST00000553709 CLDN18P56856 261 aa13.06□□□□□ -0.32
ARHGEF40-202ENST00000553709 FLVCR1-AS1Q8TAF5 88 aa13.06□□□□□ -0.32
ARHGEF40-202ENST00000553709 LEAP2Q969E1 77 aa13.06□□□□□ -0.32
ARHGEF40-202ENST00000553709 RTBDNQ9BSG5 229 aaPredicted RBP13.06□□□□□ -0.32
ARHGEF40-202ENST00000553709 PGPA6NDG6 321 aa13.06□□□□□ -0.32
ARHGEF40-202ENST00000553709 SLC25A17O43808 307 aa13.06□□□□□ -0.32
ARHGEF40-202ENST00000553709 SSTR5P35346 364 aa13.06□□□□□ -0.32
ARHGEF40-202ENST00000553709 BPIFA4PQ86YQ2 179 aa13.06□□□□□ -0.32
ARHGEF40-202ENST00000553709 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.06□□□□□ -0.32
ARHGEF40-202ENST00000553709 IFNL4K9M1U5 179 aa13.06□□□□□ -0.32
ARHGEF40-202ENST00000553709 C8orf88P0DMB2 117 aa13.06□□□□□ -0.32
ARHGEF40-202ENST00000553709 SCGB1D4Q6XE38 83 aa13.06□□□□□ -0.32
ARHGEF40-202ENST00000553709 RBPMS2Q6ZRY4 209 aaKnown RBP13.06□□□□□ -0.32
ARHGEF40-202ENST00000553709 ABHD12Q8N2K0 398 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms