RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 TMEM30BQ3MIR4 351 aa12.67□□□□□ -0.38
ABCD4-218ENST00000553486 H2BFWTQ7Z2G1 175 aa12.67□□□□□ -0.38
ABCD4-218ENST00000553486 TSNAXQ99598 290 aaKnown RBP12.67□□□□□ -0.38
ABCD4-218ENST00000553486 SAP30LQ9HAJ7 183 aa12.67□□□□□ -0.38
ABCD4-218ENST00000553486 GFOD1Q9NXC2 390 aa12.67□□□□□ -0.38
ABCD4-218ENST00000553486 ITPR3Q14573 2671 aa12.66□□□□□ -0.38
ABCD4-218ENST00000553486 HCFC1P51610 2035 aa12.66□□□□□ -0.38
ABCD4-218ENST00000553486 ZNF729A6NN14 1252 aaPredicted RBP12.66□□□□□ -0.38
ABCD4-218ENST00000553486 UMAD1C9J7I0 102 aa12.66□□□□□ -0.38
ABCD4-218ENST00000553486 H3BP45 60 aa12.66□□□□□ -0.38
ABCD4-218ENST00000553486 TSPAN15O95858 294 aa12.66□□□□□ -0.38
ABCD4-218ENST00000553486 IFNA5P01569 189 aa12.66□□□□□ -0.38
ABCD4-218ENST00000553486 UBE2KP61086 200 aa12.66□□□□□ -0.38
ABCD4-218ENST00000553486 AKR1C1Q04828 323 aa12.66□□□□□ -0.38
ABCD4-218ENST00000553486 TNFRSF9Q07011 255 aa12.66□□□□□ -0.38
ABCD4-218ENST00000553486 TMEM182Q6ZP80 229 aaPredicted RBP12.66□□□□□ -0.38
ABCD4-218ENST00000553486 OR2G3Q8NGZ4 309 aa12.66□□□□□ -0.38
ABCD4-218ENST00000553486 CORO2AQ92828 525 aa12.66□□□□□ -0.38
ABCD4-218ENST00000553486 PLPPR2Q96GM1 343 aa12.66□□□□□ -0.38
ABCD4-218ENST00000553486 C19orf12Q9NSK7 152 aa12.66□□□□□ -0.38
ABCD4-218ENST00000553486 HSPB7Q9UBY9 170 aa12.66□□□□□ -0.38
ABCD4-218ENST00000553486 NDRG3Q9UGV2 375 aa12.66□□□□□ -0.38
ABCD4-218ENST00000553486 ANKHD1Q8IWZ3 2542 aaKnown RBP12.66□□□□□ -0.38
ABCD4-218ENST00000553486 ZNF469Q96JG9 3925 aaPredicted RBP12.66□□□□□ -0.38
ABCD4-218ENST00000553486 MED13LQ71F56 2210 aa12.65□□□□□ -0.38
ABCD4-218ENST00000553486 CD3EP07766 207 aa12.65□□□□□ -0.38
ABCD4-218ENST00000553486 HBG1P69891 147 aa12.65□□□□□ -0.38
ABCD4-218ENST00000553486 HBG2P69892 147 aa12.65□□□□□ -0.38
ABCD4-218ENST00000553486 DEFA5Q01523 94 aa12.65□□□□□ -0.38
ABCD4-218ENST00000553486 ZNF616Q08AN1 781 aa12.65□□□□□ -0.38
ABCD4-218ENST00000553486 TMEM267Q0VDI3 215 aaPredicted RBP12.65□□□□□ -0.38
ABCD4-218ENST00000553486 FBXL19-AS1Q494R0 122 aa12.65□□□□□ -0.38
ABCD4-218ENST00000553486 MIDNQ504T8 468 aa12.65□□□□□ -0.38
ABCD4-218ENST00000553486 RNASE6Q93091 150 aaKnown RBP12.65□□□□□ -0.38
ABCD4-218ENST00000553486 LRRC46Q96FV0 321 aa12.65□□□□□ -0.38
ABCD4-218ENST00000553486 RBKSQ9H477 322 aa12.65□□□□□ -0.38
ABCD4-218ENST00000553486 TMA7Q9Y2S6 64 aaKnown RBP12.65□□□□□ -0.38
ABCD4-218ENST00000553486 E7EQL1 145 aa12.65□□□□□ -0.39
ABCD4-218ENST00000553486 M0R1X1 148 aa12.65□□□□□ -0.39
ABCD4-218ENST00000553486 HPRT1P00492 218 aa12.65□□□□□ -0.39
ABCD4-218ENST00000553486 KIR2DS2P43631 304 aa12.65□□□□□ -0.39
ABCD4-218ENST00000553486 SRSF3P84103 164 aaKnown RBP12.65□□□□□ -0.39
ABCD4-218ENST00000553486 NCR3LG1Q68D85 454 aa12.65□□□□□ -0.39
ABCD4-218ENST00000553486 DUX4L9Q6RFH8 374 aaPredicted RBP12.65□□□□□ -0.39
ABCD4-218ENST00000553486 TGIF2LYQ8IUE0 185 aa12.65□□□□□ -0.39
ABCD4-218ENST00000553486 FAM216BQ8N7L0 139 aa12.65□□□□□ -0.39
ABCD4-218ENST00000553486 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.65□□□□□ -0.39
ABCD4-218ENST00000553486 ABHD14AQ9BUJ0 271 aa12.65□□□□□ -0.39
ABCD4-218ENST00000553486 MS4A5Q9H3V2 200 aa12.65□□□□□ -0.39
ABCD4-218ENST00000553486 DYNLRB1Q9NP97 96 aa12.65□□□□□ -0.39
ABCD4-218ENST00000553486 UQCC1Q9NVA1 299 aa12.65□□□□□ -0.39
ABCD4-218ENST00000553486 DCAF16Q9NXF7 216 aa12.65□□□□□ -0.39
ABCD4-218ENST00000553486 IDI2-AS1Q9NZ38 188 aa12.65□□□□□ -0.39
ABCD4-218ENST00000553486 PRELID3BQ9Y3B1 194 aa12.65□□□□□ -0.39
ABCD4-218ENST00000553486 PPIAL4EA0A075B759 164 aa12.64□□□□□ -0.39
ABCD4-218ENST00000553486 hADV38S2A0JD32 116 aa12.64□□□□□ -0.39
ABCD4-218ENST00000553486 PPIAL4DF5H284 164 aa12.64□□□□□ -0.39
ABCD4-218ENST00000553486 F8W036 122 aa12.64□□□□□ -0.39
ABCD4-218ENST00000553486 RNASEK-C17orf49H0YIS7 233 aa12.64□□□□□ -0.39
ABCD4-218ENST00000553486 TMEM178BH3BS89 294 aa12.64□□□□□ -0.39
ABCD4-218ENST00000553486 PPIAL4FP0DN26 164 aa12.64□□□□□ -0.39
ABCD4-218ENST00000553486 APOBEC3AP31941 199 aaPredicted RBP12.64□□□□□ -0.39
ABCD4-218ENST00000553486 ZNF134P52741 427 aa12.64□□□□□ -0.39
ABCD4-218ENST00000553486 SLC25A24Q6NUK1 477 aa12.64□□□□□ -0.39
ABCD4-218ENST00000553486 ZCCHC24Q8N2G6 241 aaKnown RBP12.64□□□□□ -0.39
ABCD4-218ENST00000553486 MS4A7Q9GZW8 240 aaPredicted RBP12.64□□□□□ -0.39
ABCD4-218ENST00000553486 IFI27L2Q9H2X8 130 aa12.64□□□□□ -0.39
ABCD4-218ENST00000553486 LINC00574Q9H8X3 128 aa12.64□□□□□ -0.39
ABCD4-218ENST00000553486 PPIAL4AQ9Y536 164 aa12.64□□□□□ -0.39
ABCD4-218ENST00000553486 NIPBLQ6KC79 2804 aaeCLIP12.63□□□□□ -0.39
ABCD4-218ENST00000553486 AGPAT2O15120 278 aa12.63□□□□□ -0.39
ABCD4-218ENST00000553486 TMPRSS2O15393 492 aa12.63□□□□□ -0.39
ABCD4-218ENST00000553486 RBFOX2O43251 390 aaKnown RBP eCLIP12.63□□□□□ -0.39
ABCD4-218ENST00000553486 FCGR3BO75015 233 aa12.63□□□□□ -0.39
ABCD4-218ENST00000553486 PROP1O75360 226 aa12.63□□□□□ -0.39
ABCD4-218ENST00000553486 METTL15P1P0C7V9 234 aa12.63□□□□□ -0.39
ABCD4-218ENST00000553486 NDUFB7P17568 137 aa12.63□□□□□ -0.39
ABCD4-218ENST00000553486 ARHGDIBP52566 201 aa12.63□□□□□ -0.39
ABCD4-218ENST00000553486 DVL1P1P54792 670 aaPredicted RBP12.63□□□□□ -0.39
ABCD4-218ENST00000553486 SPANXN5Q5MJ07 72 aa12.63□□□□□ -0.39
ABCD4-218ENST00000553486 C10orf91Q5T1B1 145 aa12.63□□□□□ -0.39
ABCD4-218ENST00000553486 SCGB1C1Q8TD33 95 aa12.63□□□□□ -0.39
ABCD4-218ENST00000553486 NRGNQ92686 78 aa12.63□□□□□ -0.39
ABCD4-218ENST00000553486 R3HDM4Q96D70 268 aa12.63□□□□□ -0.39
ABCD4-218ENST00000553486 TMEM231Q9H6L2 316 aa12.63□□□□□ -0.39
ABCD4-218ENST00000553486 VPS13CQ709C8 3753 aa12.63□□□□□ -0.39
ABCD4-218ENST00000553486 MARCH11A6NNE9 402 aa12.62□□□□□ -0.39
ABCD4-218ENST00000553486 FAM90A9PA6NNJ1 464 aa12.62□□□□□ -0.39
ABCD4-218ENST00000553486 B9A039 149 aa12.62□□□□□ -0.39
ABCD4-218ENST00000553486 CD5P06127 495 aa12.62□□□□□ -0.39
ABCD4-218ENST00000553486 SNCAP37840 140 aa12.62□□□□□ -0.39
ABCD4-218ENST00000553486 LINC00205P59089 165 aa12.62□□□□□ -0.39
ABCD4-218ENST00000553486 BTN1A1Q13410 526 aa12.62□□□□□ -0.39
ABCD4-218ENST00000553486 EFNB3Q15768 340 aa12.62□□□□□ -0.39
ABCD4-218ENST00000553486 SVBPQ8N300 66 aa12.62□□□□□ -0.39
ABCD4-218ENST00000553486 LFNGQ8NES3 379 aa12.62□□□□□ -0.39
ABCD4-218ENST00000553486 FAM213BQ8TBF2 198 aa12.62□□□□□ -0.39
ABCD4-218ENST00000553486 CIB3Q96Q77 187 aaPredicted RBP12.62□□□□□ -0.39
ABCD4-218ENST00000553486 S1PR3Q99500 378 aa12.62□□□□□ -0.39
ABCD4-218ENST00000553486 SEC11CQ9BY50 192 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 240.4 ms