RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 C10orf55Q5SWW7 151 aa6.79□□□□□ -1.32
SYNE2-209ENST00000553308 ZFP1Q6P2D0 407 aa6.79□□□□□ -1.32
SYNE2-209ENST00000553308 SLC16A13Q7RTY0 426 aa6.79□□□□□ -1.32
SYNE2-209ENST00000553308 LYG2Q86SG7 212 aa6.79□□□□□ -1.32
SYNE2-209ENST00000553308 ZNF555Q8NEP9 628 aa6.79□□□□□ -1.32
SYNE2-209ENST00000553308 ACOT12Q8WYK0 555 aa6.79□□□□□ -1.32
SYNE2-209ENST00000553308 KCTD12Q96CX2 325 aaKnown RBP6.79□□□□□ -1.32
SYNE2-209ENST00000553308 LPAR5Q9H1C0 372 aa6.79□□□□□ -1.32
SYNE2-209ENST00000553308 C12orf4Q9NQ89 552 aa6.79□□□□□ -1.32
SYNE2-209ENST00000553308 SDHAF2Q9NX18 166 aa6.79□□□□□ -1.32
SYNE2-209ENST00000553308 TECRQ9NZ01 308 aaKnown RBP6.79□□□□□ -1.32
SYNE2-209ENST00000553308 MGAT4AQ9UM21 535 aa6.79□□□□□ -1.32
SYNE2-209ENST00000553308 DMRT1Q9Y5R6 373 aa6.79□□□□□ -1.32
SYNE2-209ENST00000553308 FRAS1Q86XX4 4008 aa6.78□□□□□ -1.32
SYNE2-209ENST00000553308 FOXI3A8MTJ6 420 aaPredicted RBP6.78□□□□□ -1.32
SYNE2-209ENST00000553308 LGALS9O00182 355 aa6.78□□□□□ -1.32
SYNE2-209ENST00000553308 OR2J3O76001 311 aa6.78□□□□□ -1.32
SYNE2-209ENST00000553308 SCAF4O95104 1147 aaKnown RBP6.78□□□□□ -1.32
SYNE2-209ENST00000553308 OR2C1O95371 312 aa6.78□□□□□ -1.32
SYNE2-209ENST00000553308 CD1AP06126 327 aa6.78□□□□□ -1.32
SYNE2-209ENST00000553308 SRMP19623 302 aa6.78□□□□□ -1.32
SYNE2-209ENST00000553308 CBLN1P23435 193 aa6.78□□□□□ -1.32
SYNE2-209ENST00000553308 ST3GAL4Q11206 333 aa6.78□□□□□ -1.32
SYNE2-209ENST00000553308 CBX3Q13185 183 aa6.78□□□□□ -1.32
SYNE2-209ENST00000553308 RTL8BQ17RB0 113 aa6.78□□□□□ -1.32
SYNE2-209ENST00000553308 C15orf32Q32M92 178 aa6.78□□□□□ -1.32
SYNE2-209ENST00000553308 VMA21Q3ZAQ7 101 aa6.78□□□□□ -1.32
SYNE2-209ENST00000553308 RBM48Q5RL73 367 aaKnown RBP6.78□□□□□ -1.32
SYNE2-209ENST00000553308 GLT8D1Q68CQ7 371 aa6.78□□□□□ -1.32
SYNE2-209ENST00000553308 C19orf35Q6ZS72 473 aa6.78□□□□□ -1.32
SYNE2-209ENST00000553308 CEACAM19Q7Z692 300 aa6.78□□□□□ -1.32
SYNE2-209ENST00000553308 TEX45Q8NA69 505 aa6.78□□□□□ -1.32
SYNE2-209ENST00000553308 OR52B4Q8NGK2 314 aa6.78□□□□□ -1.32
SYNE2-209ENST00000553308 THRSPQ92748 146 aa6.78□□□□□ -1.32
SYNE2-209ENST00000553308 SMPD3Q9NY59 655 aaPredicted RBP6.78□□□□□ -1.32
SYNE2-209ENST00000553308 MLXQ9UH92 298 aa6.78□□□□□ -1.32
SYNE2-209ENST00000553308 HERC2O95714 4834 aa6.77□□□□□ -1.33
SYNE2-209ENST00000553308 TMEM213A2RRL7 107 aa6.77□□□□□ -1.33
SYNE2-209ENST00000553308 EFCAB10A6NFE3 127 aa6.77□□□□□ -1.33
SYNE2-209ENST00000553308 TRDCB7Z8K6 153 aa6.77□□□□□ -1.33
SYNE2-209ENST00000553308 MYL12BO14950 172 aa6.77□□□□□ -1.33
SYNE2-209ENST00000553308 BET1O15155 118 aa6.77□□□□□ -1.33
SYNE2-209ENST00000553308 GGCTO75223 188 aaKnown RBP6.77□□□□□ -1.33
SYNE2-209ENST00000553308 CRYZL1O95825 349 aa6.77□□□□□ -1.33
SYNE2-209ENST00000553308 BPNT1O95861 308 aa6.77□□□□□ -1.33
SYNE2-209ENST00000553308 IGHV3-23P01764 117 aa6.77□□□□□ -1.33
SYNE2-209ENST00000553308 TMEM50BP56557 158 aa6.77□□□□□ -1.33
SYNE2-209ENST00000553308 WNT4P56705 351 aa6.77□□□□□ -1.33
SYNE2-209ENST00000553308 UBE2KP61086 200 aa6.77□□□□□ -1.33
SYNE2-209ENST00000553308 TAGLNQ01995 201 aaKnown RBP6.77□□□□□ -1.33
SYNE2-209ENST00000553308 TNFRSF9Q07011 255 aa6.77□□□□□ -1.33
SYNE2-209ENST00000553308 P2RY14Q15391 338 aa6.77□□□□□ -1.33
SYNE2-209ENST00000553308 DEFB135Q30KP9 77 aa6.77□□□□□ -1.33
SYNE2-209ENST00000553308 ACSM3Q53FZ2 586 aa6.77□□□□□ -1.33
SYNE2-209ENST00000553308 IGSF11Q5DX21 431 aa6.77□□□□□ -1.33
SYNE2-209ENST00000553308 TTC23Q5W5X9 447 aa6.77□□□□□ -1.33
SYNE2-209ENST00000553308 ZNF57Q68EA5 555 aaPredicted RBP6.77□□□□□ -1.33
SYNE2-209ENST00000553308 WFDC3Q8IUB2 231 aa6.77□□□□□ -1.33
SYNE2-209ENST00000553308 FAM89BQ8N5H3 189 aa6.77□□□□□ -1.33
SYNE2-209ENST00000553308 NECAP1Q8NC96 275 aa6.77□□□□□ -1.33
SYNE2-209ENST00000553308 PHYHIPQ92561 330 aa6.77□□□□□ -1.33
SYNE2-209ENST00000553308 ARHGAP5-AS1Q96IT6 56 aa6.77□□□□□ -1.33
SYNE2-209ENST00000553308 CCDC140Q96MF4 163 aa6.77□□□□□ -1.33
SYNE2-209ENST00000553308 CMSS1Q9BQ75 279 aaKnown RBP6.77□□□□□ -1.33
SYNE2-209ENST00000553308 URM1Q9BTM9 101 aaKnown RBP6.77□□□□□ -1.33
SYNE2-209ENST00000553308 PECRQ9BY49 303 aa6.77□□□□□ -1.33
SYNE2-209ENST00000553308 ZNF430Q9H8G1 570 aaPredicted RBP6.77□□□□□ -1.33
SYNE2-209ENST00000553308 HSF4Q9ULV5 492 aa6.77□□□□□ -1.33
SYNE2-209ENST00000553308 KLK5Q9Y337 293 aaPredicted RBP6.77□□□□□ -1.33
SYNE2-209ENST00000553308 S4R3C0 116 aa6.77□□□□□ -1.33
SYNE2-209ENST00000553308 HMX3A6NHT5 357 aa6.76□□□□□ -1.33
SYNE2-209ENST00000553308 LINC00473A8K010 186 aa6.76□□□□□ -1.33
SYNE2-209ENST00000553308 FABP7O15540 132 aa6.76□□□□□ -1.33
SYNE2-209ENST00000553308 SPRY2O43597 315 aa6.76□□□□□ -1.33
SYNE2-209ENST00000553308 NDUFB8O95169 186 aa6.76□□□□□ -1.33
SYNE2-209ENST00000553308 SAA1P0DJI8 122 aaPredicted RBP6.76□□□□□ -1.33
SYNE2-209ENST00000553308 RRASP10301 218 aa6.76□□□□□ -1.33
SYNE2-209ENST00000553308 SERPINB10P48595 397 aa6.76□□□□□ -1.33
SYNE2-209ENST00000553308 TM4SF20Q53R12 229 aa6.76□□□□□ -1.33
SYNE2-209ENST00000553308 PLAC9Q5JTB6 97 aa6.76□□□□□ -1.33
SYNE2-209ENST00000553308 BTNL8Q6UX41 500 aa6.76□□□□□ -1.33
SYNE2-209ENST00000553308 AHSA2Q719I0 299 aa6.76□□□□□ -1.33
SYNE2-209ENST00000553308 PQLC1Q8N2U9 271 aa6.76□□□□□ -1.33
SYNE2-209ENST00000553308 TTC9CQ8N5M4 171 aa6.76□□□□□ -1.33
SYNE2-209ENST00000553308 UXS1Q8NBZ7 420 aa6.76□□□□□ -1.33
SYNE2-209ENST00000553308 OR6M1Q8NGM8 313 aa6.76□□□□□ -1.33
SYNE2-209ENST00000553308 OR4A4PQ8NGN8 299 aa6.76□□□□□ -1.33
SYNE2-209ENST00000553308 CYGBQ8WWM9 190 aa6.76□□□□□ -1.33
SYNE2-209ENST00000553308 GFI1Q99684 422 aa6.76□□□□□ -1.33
SYNE2-209ENST00000553308 SPIN2AQ99865 258 aa6.76□□□□□ -1.33
SYNE2-209ENST00000553308 SPIN2BQ9BPZ2 258 aa6.76□□□□□ -1.33
SYNE2-209ENST00000553308 CABLES2Q9BTV7 478 aa6.76□□□□□ -1.33
SYNE2-209ENST00000553308 FBXL7Q9UJT9 491 aa6.76□□□□□ -1.33
SYNE2-209ENST00000553308 ZNF320A2RRD8 509 aa6.75□□□□□ -1.33
SYNE2-209ENST00000553308 A8MWP6 167 aa6.75□□□□□ -1.33
SYNE2-209ENST00000553308 ACTL6BO94805 426 aa6.75□□□□□ -1.33
SYNE2-209ENST00000553308 GSTT2P0CG29 244 aa6.75□□□□□ -1.33
SYNE2-209ENST00000553308 GSTT2BP0CG30 244 aa6.75□□□□□ -1.33
SYNE2-209ENST00000553308 CD37P11049 281 aa6.75□□□□□ -1.33
SYNE2-209ENST00000553308 DUTP33316 252 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms