RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 DNLZQ5SXM8 178 aa3.39□□□□□ -1.87
SCFD1-208ENST00000553278 TMEM42Q69YG0 159 aa3.39□□□□□ -1.87
SCFD1-208ENST00000553278 ZNF660Q6AZW8 331 aaPredicted RBP3.39□□□□□ -1.87
SCFD1-208ENST00000553278 SLC22A24Q8N4F4 322 aa3.39□□□□□ -1.87
SCFD1-208ENST00000553278 OR4K13Q8NH42 304 aa3.39□□□□□ -1.87
SCFD1-208ENST00000553278 RAB2BQ8WUD1 216 aa3.39□□□□□ -1.87
SCFD1-208ENST00000553278 MRPL27Q9P0M9 148 aaKnown RBP3.39□□□□□ -1.87
SCFD1-208ENST00000553278 COQ4Q9Y3A0 265 aa3.39□□□□□ -1.87
SCFD1-208ENST00000553278 PCF11O94913 1555 aaKnown RBP3.38□□□□□ -1.87
SCFD1-208ENST00000553278 CHD5Q8TDI0 1954 aa3.38□□□□□ -1.87
SCFD1-208ENST00000553278 TMEM238C9JI98 176 aa3.38□□□□□ -1.87
SCFD1-208ENST00000553278 ZNF878C9JN71 531 aa3.38□□□□□ -1.87
SCFD1-208ENST00000553278 OR7C1O76099 320 aaPredicted RBP3.38□□□□□ -1.87
SCFD1-208ENST00000553278 ESDP10768 282 aa3.38□□□□□ -1.87
SCFD1-208ENST00000553278 G0S2P27469 103 aa3.38□□□□□ -1.87
SCFD1-208ENST00000553278 TNFAIP6P98066 277 aaPredicted RBP3.38□□□□□ -1.87
SCFD1-208ENST00000553278 LPCAT3Q6P1A2 487 aa3.38□□□□□ -1.87
SCFD1-208ENST00000553278 AMTNQ6UX39 209 aa3.38□□□□□ -1.87
SCFD1-208ENST00000553278 TMED4Q7Z7H5 227 aa3.38□□□□□ -1.87
SCFD1-208ENST00000553278 OR4X1Q8NH49 305 aa3.38□□□□□ -1.87
SCFD1-208ENST00000553278 PRRT1Q99946 306 aa3.38□□□□□ -1.87
SCFD1-208ENST00000553278 CYTL1Q9NRR1 136 aa3.38□□□□□ -1.87
SCFD1-208ENST00000553278 TAAR3PQ9P1P4 343 aa3.38□□□□□ -1.87
SCFD1-208ENST00000553278 SNX12Q9UMY4 172 aa3.38□□□□□ -1.87
SCFD1-208ENST00000553278 ZNF443Q9Y2A4 671 aaPredicted RBP3.38□□□□□ -1.87
SCFD1-208ENST00000553278 ZNF532Q9HCE3 1301 aa3.38□□□□□ -1.87
SCFD1-208ENST00000553278 CRB1P82279 1406 aa3.37□□□□□ -1.87
SCFD1-208ENST00000553278 WRNQ14191 1432 aaPredicted RBP eCLIP3.37□□□□□ -1.87
SCFD1-208ENST00000553278 SSH2Q76I76 1423 aa3.37□□□□□ -1.87
SCFD1-208ENST00000553278 IGKV1D-37A0A075B6S9 117 aa3.37□□□□□ -1.87
SCFD1-208ENST00000553278 KNCNA6PVL3 124 aa3.37□□□□□ -1.87
SCFD1-208ENST00000553278 SLC17A3O00476 420 aa3.37□□□□□ -1.87
SCFD1-208ENST00000553278 IGHMP01871 453 aa3.37□□□□□ -1.87
SCFD1-208ENST00000553278 KCNE1P15382 129 aa3.37□□□□□ -1.87
SCFD1-208ENST00000553278 NPPCP23582 126 aa3.37□□□□□ -1.87
SCFD1-208ENST00000553278 TSPEAR-AS2P59090 65 aa3.37□□□□□ -1.87
SCFD1-208ENST00000553278 LINC00315P59091 139 aa3.37□□□□□ -1.87
SCFD1-208ENST00000553278 RPL19P84098 196 aaKnown RBP3.37□□□□□ -1.87
SCFD1-208ENST00000553278 PSG4Q00888 419 aa3.37□□□□□ -1.87
SCFD1-208ENST00000553278 GNA12Q03113 381 aa3.37□□□□□ -1.87
SCFD1-208ENST00000553278 DHRS2Q13268 280 aa3.37□□□□□ -1.87
SCFD1-208ENST00000553278 MOBPQ13875 183 aa3.37□□□□□ -1.87
SCFD1-208ENST00000553278 SLC9A3R2Q15599 337 aa3.37□□□□□ -1.87
SCFD1-208ENST00000553278 DHRS4L2Q6PKH6 230 aa3.37□□□□□ -1.87
SCFD1-208ENST00000553278 TMEM136Q6ZRR5 245 aa3.37□□□□□ -1.87
SCFD1-208ENST00000553278 GLT6D1Q7Z4J2 308 aa3.37□□□□□ -1.87
SCFD1-208ENST00000553278 H1FOOQ8IZA3 346 aaPredicted RBP3.37□□□□□ -1.87
SCFD1-208ENST00000553278 MCFD2Q8NI22 146 aa3.37□□□□□ -1.87
SCFD1-208ENST00000553278 ROPN1LQ96C74 230 aa3.37□□□□□ -1.87
SCFD1-208ENST00000553278 MGLLQ99685 303 aa3.37□□□□□ -1.87
SCFD1-208ENST00000553278 MND1Q9BWT6 205 aa3.37□□□□□ -1.87
SCFD1-208ENST00000553278 CMTM6Q9NX76 183 aa3.37□□□□□ -1.87
SCFD1-208ENST00000553278 PRELID1Q9Y255 219 aa3.37□□□□□ -1.87
SCFD1-208ENST00000553278 FAM32AQ9Y421 112 aaKnown RBP3.37□□□□□ -1.87
SCFD1-208ENST00000553278 V9GYQ6 96 aa3.37□□□□□ -1.87
SCFD1-208ENST00000553278 OTOFQ9HC10 1997 aa3.37□□□□□ -1.87
SCFD1-208ENST00000553278 ARID1AO14497 2285 aa3.36□□□□□ -1.87
SCFD1-208ENST00000553278 A0A1B0GW54 56 aa3.36□□□□□ -1.87
SCFD1-208ENST00000553278 DHRS12A0PJE2 317 aa3.36□□□□□ -1.87
SCFD1-208ENST00000553278 IGSF23A1L1A6 192 aa3.36□□□□□ -1.87
SCFD1-208ENST00000553278 LRCOL1A6NCL2 159 aa3.36□□□□□ -1.87
SCFD1-208ENST00000553278 OR4C46A6NHA9 309 aa3.36□□□□□ -1.87
SCFD1-208ENST00000553278 UBE2L6O14933 153 aa3.36□□□□□ -1.87
SCFD1-208ENST00000553278 PDE6DO43924 150 aa3.36□□□□□ -1.87
SCFD1-208ENST00000553278 IGKV3-11P04433 115 aa3.36□□□□□ -1.87
SCFD1-208ENST00000553278 CRYGDP07320 174 aa3.36□□□□□ -1.87
SCFD1-208ENST00000553278 SLC25A16P16260 332 aa3.36□□□□□ -1.87
SCFD1-208ENST00000553278 ZNF140P52738 457 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-208ENST00000553278 SNRPD2P62316 118 aaKnown RBP3.36□□□□□ -1.87
SCFD1-208ENST00000553278 TBPL1P62380 186 aa3.36□□□□□ -1.87
SCFD1-208ENST00000553278 KRR1Q13601 381 aaKnown RBP3.36□□□□□ -1.87
SCFD1-208ENST00000553278 IAH1Q2TAA2 248 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-208ENST00000553278 RASL11AQ6T310 242 aa3.36□□□□□ -1.87
SCFD1-208ENST00000553278 RNF182Q8N6D2 247 aa3.36□□□□□ -1.87
SCFD1-208ENST00000553278 ZNF676Q8N7Q3 588 aa3.36□□□□□ -1.87
SCFD1-208ENST00000553278 OR10A6Q8NH74 314 aa3.36□□□□□ -1.87
SCFD1-208ENST00000553278 FNDC9Q8TBE3 224 aa3.36□□□□□ -1.87
SCFD1-208ENST00000553278 DUSP21Q9H596 190 aa3.36□□□□□ -1.87
SCFD1-208ENST00000553278 PRTFDC1Q9NRG1 225 aa3.36□□□□□ -1.87
SCFD1-208ENST00000553278 IDI2-AS1Q9NZ38 188 aa3.36□□□□□ -1.87
SCFD1-208ENST00000553278 DICER1Q9UPY3 1922 aaKnown RBP3.36□□□□□ -1.87
SCFD1-208ENST00000553278 CAMSAP1Q5T5Y3 1602 aa3.35□□□□□ -1.87
SCFD1-208ENST00000553278 C9JCJ5 164 aa3.35□□□□□ -1.87
SCFD1-208ENST00000553278 C15orf65H3BRN8 121 aa3.35□□□□□ -1.87
SCFD1-208ENST00000553278 INAFM2P0DMQ5 153 aa3.35□□□□□ -1.87
SCFD1-208ENST00000553278 RPL5P46777 297 aaKnown RBP3.35□□□□□ -1.87
SCFD1-208ENST00000553278 FOXA1P55317 472 aa3.35□□□□□ -1.87
SCFD1-208ENST00000553278 FKBP1AP62942 108 aaKnown RBP3.35□□□□□ -1.87
SCFD1-208ENST00000553278 GLT8D1Q68CQ7 371 aa3.35□□□□□ -1.87
SCFD1-208ENST00000553278 SDIM1Q6ZPB5 146 aa3.35□□□□□ -1.87
SCFD1-208ENST00000553278 SLC36A1Q7Z2H8 476 aa3.35□□□□□ -1.87
SCFD1-208ENST00000553278 EIF4E3Q8N5X7 224 aaKnown RBP3.35□□□□□ -1.87
SCFD1-208ENST00000553278 DAND5Q8N907 189 aa3.35□□□□□ -1.87
SCFD1-208ENST00000553278 OR11H1Q8NG94 326 aa3.35□□□□□ -1.87
SCFD1-208ENST00000553278 RAD51AP1Q96B01 352 aa3.35□□□□□ -1.87
SCFD1-208ENST00000553278 UPK3BQ9BT76 320 aa3.35□□□□□ -1.87
SCFD1-208ENST00000553278 ABCG5Q9H222 651 aa3.35□□□□□ -1.87
SCFD1-208ENST00000553278 C11orf1Q9H5F2 150 aa3.35□□□□□ -1.87
SCFD1-208ENST00000553278 ENY2Q9NPA8 101 aa3.35□□□□□ -1.87
SCFD1-208ENST00000553278 ARMC1Q9NVT9 282 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms