RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 RAMP3O60896 148 aa8.03□□□□□ -1.12
TMEM116-216ENST00000552800 MMP23AO75900 390 aa8.03□□□□□ -1.12
TMEM116-216ENST00000552800 SCAF4O95104 1147 aaKnown RBP8.03□□□□□ -1.12
TMEM116-216ENST00000552800 TMEM50AO95807 157 aa8.03□□□□□ -1.12
TMEM116-216ENST00000552800 IGLV1-47P01700 117 aa8.03□□□□□ -1.12
TMEM116-216ENST00000552800 FAM157CP0CG43 387 aa8.03□□□□□ -1.12
TMEM116-216ENST00000552800 RRASP10301 218 aa8.03□□□□□ -1.12
TMEM116-216ENST00000552800 TPT1P13693 172 aaKnown RBP8.03□□□□□ -1.12
TMEM116-216ENST00000552800 LRRC37A5PQ49AS3 106 aa8.03□□□□□ -1.12
TMEM116-216ENST00000552800 CXorf66Q5JRM2 361 aaPredicted RBP8.03□□□□□ -1.12
TMEM116-216ENST00000552800 THOC7Q6I9Y2 204 aaKnown RBP8.03□□□□□ -1.12
TMEM116-216ENST00000552800 EIF5AL1Q6IS14 154 aaKnown RBP8.03□□□□□ -1.12
TMEM116-216ENST00000552800 FOXRED2Q8IWF2 684 aa8.03□□□□□ -1.12
TMEM116-216ENST00000552800 TMEM252Q8N6L7 170 aa8.03□□□□□ -1.12
TMEM116-216ENST00000552800 BEND2Q8NDZ0 799 aa8.03□□□□□ -1.12
TMEM116-216ENST00000552800 NEIL1Q96FI4 390 aaPredicted RBP8.03□□□□□ -1.12
TMEM116-216ENST00000552800 GPHA2Q96T91 129 aa8.03□□□□□ -1.12
TMEM116-216ENST00000552800 PARD6GQ9BYG4 376 aaPredicted RBP8.03□□□□□ -1.12
TMEM116-216ENST00000552800 KRTAP4-7Q9BYR0 210 aa8.03□□□□□ -1.12
TMEM116-216ENST00000552800 SLC25A31Q9H0C2 315 aa8.03□□□□□ -1.12
TMEM116-216ENST00000552800 RNF150Q9ULK6 438 aa8.03□□□□□ -1.12
TMEM116-216ENST00000552800 SMG1Q96Q15 3661 aaKnown RBP8.03□□□□□ -1.12
TMEM116-216ENST00000552800 IGHV3-43A0A0B4J1X8 118 aa8.02□□□□□ -1.13
TMEM116-216ENST00000552800 A8MXK9 166 aa8.02□□□□□ -1.13
TMEM116-216ENST00000552800 INS-IGF2F8WCM5 200 aa8.02□□□□□ -1.13
TMEM116-216ENST00000552800 J3QR06 171 aa8.02□□□□□ -1.13
TMEM116-216ENST00000552800 M0R1W7 72 aa8.02□□□□□ -1.13
TMEM116-216ENST00000552800 SLC31A2O15432 143 aa8.02□□□□□ -1.13
TMEM116-216ENST00000552800 TXNL1O43396 289 aa8.02□□□□□ -1.13
TMEM116-216ENST00000552800 SYNGR2O43760 224 aa8.02□□□□□ -1.13
TMEM116-216ENST00000552800 CHST1O43916 411 aa8.02□□□□□ -1.13
TMEM116-216ENST00000552800 ATP6V1G1O75348 118 aa8.02□□□□□ -1.13
TMEM116-216ENST00000552800 MED6O75586 246 aa8.02□□□□□ -1.13
TMEM116-216ENST00000552800 C1QL1O75973 258 aa8.02□□□□□ -1.13
TMEM116-216ENST00000552800 NMBP08949 121 aa8.02□□□□□ -1.13
TMEM116-216ENST00000552800 SEC11BP0C7V7 166 aa8.02□□□□□ -1.13
TMEM116-216ENST00000552800 CT45A6P0DMU7 189 aa8.02□□□□□ -1.13
TMEM116-216ENST00000552800 CT45A5P0DMU8 189 aa8.02□□□□□ -1.13
TMEM116-216ENST00000552800 CT45A7P0DMV0 189 aa8.02□□□□□ -1.13
TMEM116-216ENST00000552800 IGHV1-8P0DP01 117 aa8.02□□□□□ -1.13
TMEM116-216ENST00000552800 IGHV3-43DP0DP04 118 aa8.02□□□□□ -1.13
TMEM116-216ENST00000552800 NQO2P16083 231 aa8.02□□□□□ -1.13
TMEM116-216ENST00000552800 NDUFB7P17568 137 aa8.02□□□□□ -1.13
TMEM116-216ENST00000552800 HTR2BP41595 481 aa8.02□□□□□ -1.13
TMEM116-216ENST00000552800 ATP5IP56385 69 aaPredicted RBP8.02□□□□□ -1.13
TMEM116-216ENST00000552800 WDR25Q64LD2 544 aaPredicted RBP8.02□□□□□ -1.13
TMEM116-216ENST00000552800 OR9G1Q8NH87 305 aa8.02□□□□□ -1.13
TMEM116-216ENST00000552800 LYPD6BQ8NI32 183 aa8.02□□□□□ -1.13
TMEM116-216ENST00000552800 UBALD1Q8TB05 177 aa8.02□□□□□ -1.13
TMEM116-216ENST00000552800 SAT2Q96F10 170 aaPredicted RBP8.02□□□□□ -1.13
TMEM116-216ENST00000552800 TIMD4Q96H15 378 aa8.02□□□□□ -1.13
TMEM116-216ENST00000552800 S1PR3Q99500 378 aa8.02□□□□□ -1.13
TMEM116-216ENST00000552800 GINS3Q9BRX5 216 aa8.02□□□□□ -1.13
TMEM116-216ENST00000552800 YLPM1P49750 1951 aaKnown RBP8.02□□□□□ -1.13
TMEM116-216ENST00000552800 SAA2-SAA4A0A096LPE2 208 aa8.01□□□□□ -1.13
TMEM116-216ENST00000552800 MARCH11A6NNE9 402 aa8.01□□□□□ -1.13
TMEM116-216ENST00000552800 LY6LH3BQJ8 138 aa8.01□□□□□ -1.13
TMEM116-216ENST00000552800 LIPFP07098 398 aa8.01□□□□□ -1.13
TMEM116-216ENST00000552800 OR8U8P0C7N1 319 aa8.01□□□□□ -1.13
TMEM116-216ENST00000552800 SAA2P0DJI9 122 aaPredicted RBP8.01□□□□□ -1.13
TMEM116-216ENST00000552800 RAB14P61106 215 aa8.01□□□□□ -1.13
TMEM116-216ENST00000552800 POLR2GP62487 172 aaKnown RBP eCLIP8.01□□□□□ -1.13
TMEM116-216ENST00000552800 PAX2Q02962 417 aa8.01□□□□□ -1.13
TMEM116-216ENST00000552800 TNFRSF9Q07011 255 aa8.01□□□□□ -1.13
TMEM116-216ENST00000552800 TMEM177Q53S58 311 aa8.01□□□□□ -1.13
TMEM116-216ENST00000552800 UTF1Q5T230 341 aa8.01□□□□□ -1.13
TMEM116-216ENST00000552800 TMEM14EPQ6UXP3 125 aa8.01□□□□□ -1.13
TMEM116-216ENST00000552800 KIR3DL3Q8N743 410 aa8.01□□□□□ -1.13
TMEM116-216ENST00000552800 ZNF383Q8NA42 475 aa8.01□□□□□ -1.13
TMEM116-216ENST00000552800 OR4S2Q8NH73 311 aa8.01□□□□□ -1.13
TMEM116-216ENST00000552800 TCTEX1D2Q8WW35 142 aa8.01□□□□□ -1.13
TMEM116-216ENST00000552800 RNF5Q99942 180 aa8.01□□□□□ -1.13
TMEM116-216ENST00000552800 TMEM133Q9H2Q1 129 aa8.01□□□□□ -1.13
TMEM116-216ENST00000552800 BARX1Q9HBU1 254 aaPredicted RBP8.01□□□□□ -1.13
TMEM116-216ENST00000552800 KCNS2Q9ULS6 477 aa8.01□□□□□ -1.13
TMEM116-216ENST00000552800 SESN1Q9Y6P5 492 aa8.01□□□□□ -1.13
TMEM116-216ENST00000552800 hCG_1809904A0A1W2PP81 198 aa8□□□□□ -1.13
TMEM116-216ENST00000552800 A0A1W2PPE2 198 aa8□□□□□ -1.13
TMEM116-216ENST00000552800 A0A1W2PR64 198 aa8□□□□□ -1.13
TMEM116-216ENST00000552800 A0A1W2PRV1 198 aa8□□□□□ -1.13
TMEM116-216ENST00000552800 PMS2P5A8MQ11 134 aa8□□□□□ -1.13
TMEM116-216ENST00000552800 NUDT19A8MXV4 375 aa8□□□□□ -1.13
TMEM116-216ENST00000552800 S1PR2O95136 353 aa8□□□□□ -1.13
TMEM116-216ENST00000552800 SPP1P10451 314 aa8□□□□□ -1.13
TMEM116-216ENST00000552800 OMGP23515 440 aa8□□□□□ -1.13
TMEM116-216ENST00000552800 MC5RP33032 325 aa8□□□□□ -1.13
TMEM116-216ENST00000552800 UBE2KP61086 200 aa8□□□□□ -1.13
TMEM116-216ENST00000552800 RPL23AP62750 156 aaKnown RBP8□□□□□ -1.13
TMEM116-216ENST00000552800 GNB2P62879 340 aa8□□□□□ -1.13
TMEM116-216ENST00000552800 EWSR1Q01844 656 aaKnown RBP eCLIP8□□□□□ -1.13
TMEM116-216ENST00000552800 SP5Q6BEB4 398 aaPredicted RBP8□□□□□ -1.13
TMEM116-216ENST00000552800 CENPVQ7Z7K6 275 aaPredicted RBP8□□□□□ -1.13
TMEM116-216ENST00000552800 OR11H6Q8NGC7 330 aa8□□□□□ -1.13
TMEM116-216ENST00000552800 OR8B3Q8NGG8 313 aa8□□□□□ -1.13
TMEM116-216ENST00000552800 OSR1Q8TAX0 266 aaPredicted RBP8□□□□□ -1.13
TMEM116-216ENST00000552800 FAM210AQ96ND0 272 aa8□□□□□ -1.13
TMEM116-216ENST00000552800 CIB3Q96Q77 187 aaPredicted RBP8□□□□□ -1.13
TMEM116-216ENST00000552800 OR8B2Q96RD0 313 aa8□□□□□ -1.13
TMEM116-216ENST00000552800 TSNAXQ99598 290 aaKnown RBP8□□□□□ -1.13
TMEM116-216ENST00000552800 BET1LQ9NYM9 111 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms