RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 LOC105371267A0A1B0GV96 52 aa11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 A0A1W2PPE3 182 aa11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 BTBD17A6NE02 478 aa11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 TMEM178BH3BS89 294 aa11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 GPR37O15354 613 aa11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 TMPRSS2O15393 492 aa11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 RBMXL2O75526 392 aaKnown RBP11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 OR9G9P0C7N8 305 aa11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 NFYBP25208 207 aa11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 CCL20P78556 96 aa11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 OR8G2PQ6IF36 304 aa11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 ZNF439Q8NDP4 499 aa11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 DDB2Q92466 427 aa11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 NEUROG1Q92886 237 aa11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 ZDHHC16Q969W1 377 aa11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 PSMG3Q9BT73 122 aaPredicted RBP11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 KPTNQ9Y664 436 aa11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 HCFC1P51610 2035 aa11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 NBEAQ8NFP9 2946 aa11.55□□□□□ -0.56
RAB3IP-216ENST00000552199 PPIAL4EA0A075B759 164 aa11.55□□□□□ -0.56
RAB3IP-216ENST00000552199 hADV38S2A0JD32 116 aa11.55□□□□□ -0.56
RAB3IP-216ENST00000552199 PPIAL4DF5H284 164 aa11.55□□□□□ -0.56
RAB3IP-216ENST00000552199 PPIAL4FP0DN26 164 aa11.55□□□□□ -0.56
RAB3IP-216ENST00000552199 NDUFB7P17568 137 aa11.55□□□□□ -0.56
RAB3IP-216ENST00000552199 TLE4Q04727 773 aa11.55□□□□□ -0.56
RAB3IP-216ENST00000552199 ATP6V1FQ16864 119 aa11.55□□□□□ -0.56
RAB3IP-216ENST00000552199 AARDQ4LEZ3 155 aa11.55□□□□□ -0.56
RAB3IP-216ENST00000552199 KDF1Q8NAX2 398 aaPredicted RBP11.55□□□□□ -0.56
RAB3IP-216ENST00000552199 QTRT1Q9BXR0 403 aaKnown RBP11.55□□□□□ -0.56
RAB3IP-216ENST00000552199 WDR61Q9GZS3 305 aaKnown RBP11.55□□□□□ -0.56
RAB3IP-216ENST00000552199 PPIAL4AQ9Y536 164 aa11.55□□□□□ -0.56
RAB3IP-216ENST00000552199 SAA2-SAA4A0A096LPE2 208 aa11.54□□□□□ -0.56
RAB3IP-216ENST00000552199 PMS2P5A8MQ11 134 aa11.54□□□□□ -0.56
RAB3IP-216ENST00000552199 CEBPZOSA8MTT3 80 aa11.54□□□□□ -0.56
RAB3IP-216ENST00000552199 MMP23AO75900 390 aa11.54□□□□□ -0.56
RAB3IP-216ENST00000552199 SAA2P0DJI9 122 aaPredicted RBP11.54□□□□□ -0.56
RAB3IP-216ENST00000552199 DHRS7BQ6IAN0 325 aaPredicted RBP11.54□□□□□ -0.56
RAB3IP-216ENST00000552199 CLRN3Q8NCR9 226 aa11.54□□□□□ -0.56
RAB3IP-216ENST00000552199 ST6GALNAC3Q8NDV1 305 aa11.54□□□□□ -0.56
RAB3IP-216ENST00000552199 ZNF251Q9BRH9 671 aa11.54□□□□□ -0.56
RAB3IP-216ENST00000552199 TMEM106BQ9NUM4 274 aa11.54□□□□□ -0.56
RAB3IP-216ENST00000552199 SLC25A10Q9UBX3 287 aaPredicted RBP11.54□□□□□ -0.56
RAB3IP-216ENST00000552199 RPUSD1Q9UJJ7 312 aaKnown RBP11.54□□□□□ -0.56
RAB3IP-216ENST00000552199 LINC00312Q9Y6C7 94 aa11.54□□□□□ -0.56
RAB3IP-216ENST00000552199 TNFRSF13BO14836 293 aaPredicted RBP11.54□□□□□ -0.56
RAB3IP-216ENST00000552199 CD3EP07766 207 aa11.54□□□□□ -0.56
RAB3IP-216ENST00000552199 NQO2P16083 231 aa11.54□□□□□ -0.56
RAB3IP-216ENST00000552199 APOBEC3AP31941 199 aaPredicted RBP11.54□□□□□ -0.56
RAB3IP-216ENST00000552199 THBS3P49746 956 aa11.54□□□□□ -0.56
RAB3IP-216ENST00000552199 ERVK-16P61578 105 aa11.54□□□□□ -0.56
RAB3IP-216ENST00000552199 MRPS11P82912 194 aaKnown RBP11.54□□□□□ -0.56
RAB3IP-216ENST00000552199 SERF2P84101 59 aa11.54□□□□□ -0.56
RAB3IP-216ENST00000552199 MEF2CQ06413 473 aaPredicted RBP11.54□□□□□ -0.56
RAB3IP-216ENST00000552199 FBXL19-AS1Q494R0 122 aa11.54□□□□□ -0.56
RAB3IP-216ENST00000552199 PRAMEF5Q5TYX0 476 aa11.54□□□□□ -0.56
RAB3IP-216ENST00000552199 SSX9Q7RTT3 188 aa11.54□□□□□ -0.56
RAB3IP-216ENST00000552199 SFT2D1Q8WV19 159 aa11.54□□□□□ -0.56
RAB3IP-216ENST00000552199 CCL17Q92583 94 aa11.54□□□□□ -0.56
RAB3IP-216ENST00000552199 TAF15Q92804 592 aaKnown RBP eCLIP11.54□□□□□ -0.56
RAB3IP-216ENST00000552199 SMDT1Q9H4I9 107 aa11.54□□□□□ -0.56
RAB3IP-216ENST00000552199 DYNLRB1Q9NP97 96 aa11.54□□□□□ -0.56
RAB3IP-216ENST00000552199 KIAA1456Q9P272 454 aa11.54□□□□□ -0.56
RAB3IP-216ENST00000552199 DOCK11Q5JSL3 2073 aa11.54□□□□□ -0.56
RAB3IP-216ENST00000552199 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.53□□□□□ -0.56
RAB3IP-216ENST00000552199 RBFOX3A6NFN3 312 aa11.53□□□□□ -0.56
RAB3IP-216ENST00000552199 CCL21O00585 134 aa11.53□□□□□ -0.56
RAB3IP-216ENST00000552199 HBE1P02100 147 aa11.53□□□□□ -0.56
RAB3IP-216ENST00000552199 ATF4P18848 351 aaPredicted RBP11.53□□□□□ -0.56
RAB3IP-216ENST00000552199 CHRNB4P30926 498 aa11.53□□□□□ -0.56
RAB3IP-216ENST00000552199 OR2B8PP59922 312 aa11.53□□□□□ -0.56
RAB3IP-216ENST00000552199 SPINK9Q5DT21 86 aa11.53□□□□□ -0.56
RAB3IP-216ENST00000552199 TMEM88Q6PEY1 159 aa11.53□□□□□ -0.56
RAB3IP-216ENST00000552199 LYG1Q8N1E2 194 aa11.53□□□□□ -0.56
RAB3IP-216ENST00000552199 OR4A16Q8NH70 328 aa11.53□□□□□ -0.56
RAB3IP-216ENST00000552199 OR4S2Q8NH73 311 aa11.53□□□□□ -0.56
RAB3IP-216ENST00000552199 ADTRPQ96IZ2 230 aa11.53□□□□□ -0.56
RAB3IP-216ENST00000552199 SLC35B3Q9H1N7 401 aa11.53□□□□□ -0.56
RAB3IP-216ENST00000552199 MS4A5Q9H3V2 200 aa11.53□□□□□ -0.56
RAB3IP-216ENST00000552199 YLPM1P49750 1951 aaKnown RBP11.53□□□□□ -0.56
RAB3IP-216ENST00000552199 TRAV1-1A0A0B4J248 108 aa11.52□□□□□ -0.56
RAB3IP-216ENST00000552199 UBE2L5PA0A1B0GUS4 154 aa11.52□□□□□ -0.56
RAB3IP-216ENST00000552199 FAM90A27PA6NNH2 459 aa11.52□□□□□ -0.56
RAB3IP-216ENST00000552199 LY86O95711 162 aa11.52□□□□□ -0.56
RAB3IP-216ENST00000552199 GNG10P50151 68 aa11.52□□□□□ -0.56
RAB3IP-216ENST00000552199 SPCS3P61009 180 aa11.52□□□□□ -0.56
RAB3IP-216ENST00000552199 RAB2AP61019 212 aa11.52□□□□□ -0.56
RAB3IP-216ENST00000552199 RELBQ01201 579 aa11.52□□□□□ -0.56
RAB3IP-216ENST00000552199 EFNB3Q15768 340 aa11.52□□□□□ -0.56
RAB3IP-216ENST00000552199 SLC25A48Q6ZT89 311 aaKnown RBP11.52□□□□□ -0.56
RAB3IP-216ENST00000552199 VKORC1L1Q8N0U8 176 aa11.52□□□□□ -0.56
RAB3IP-216ENST00000552199 OR10P1Q8NGE3 313 aa11.52□□□□□ -0.56
RAB3IP-216ENST00000552199 OR10A7Q8NGE5 316 aa11.52□□□□□ -0.56
RAB3IP-216ENST00000552199 OR52E5Q8NH55 327 aa11.52□□□□□ -0.56
RAB3IP-216ENST00000552199 LINC01560Q8TB33 94 aa11.52□□□□□ -0.56
RAB3IP-216ENST00000552199 PINX1Q96BK5 328 aaKnown RBP11.52□□□□□ -0.56
RAB3IP-216ENST00000552199 RARRES2Q99969 163 aa11.52□□□□□ -0.56
RAB3IP-216ENST00000552199 TMEM147Q9BVK8 224 aa11.52□□□□□ -0.56
RAB3IP-216ENST00000552199 RPRMQ9NS64 109 aa11.52□□□□□ -0.56
RAB3IP-216ENST00000552199 NDRG3Q9UGV2 375 aa11.52□□□□□ -0.56
RAB3IP-216ENST00000552199 B9A039 149 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms