RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 LINC00473A8K010 186 aa8.39□□□□□ -1.07
PTCH1-225ENST00000551845 M0QZ24 198 aa8.39□□□□□ -1.07
PTCH1-225ENST00000551845 FCGR3BO75015 233 aa8.39□□□□□ -1.07
PTCH1-225ENST00000551845 FBXO24O75426 580 aa8.39□□□□□ -1.07
PTCH1-225ENST00000551845 HLA-DRB1P01911 266 aa8.39□□□□□ -1.07
PTCH1-225ENST00000551845 CD28P10747 220 aa8.39□□□□□ -1.07
PTCH1-225ENST00000551845 GNRHRP30968 328 aa8.39□□□□□ -1.07
PTCH1-225ENST00000551845 TAS2R19P59542 299 aa8.39□□□□□ -1.07
PTCH1-225ENST00000551845 TMEM177Q53S58 311 aa8.39□□□□□ -1.07
PTCH1-225ENST00000551845 RNASE10Q5GAN6 216 aaKnown RBP8.39□□□□□ -1.07
PTCH1-225ENST00000551845 VAX1Q5SQQ9 334 aa8.39□□□□□ -1.07
PTCH1-225ENST00000551845 ZNF660Q6AZW8 331 aaPredicted RBP8.39□□□□□ -1.07
PTCH1-225ENST00000551845 KCTD9Q7L273 389 aa8.39□□□□□ -1.07
PTCH1-225ENST00000551845 CMTM1Q8IZ96 169 aa8.39□□□□□ -1.07
PTCH1-225ENST00000551845 STPG2Q8N412 459 aa8.39□□□□□ -1.07
PTCH1-225ENST00000551845 TMEM229BQ8NBD8 167 aa8.39□□□□□ -1.07
PTCH1-225ENST00000551845 OR4X2Q8NGF9 303 aa8.39□□□□□ -1.07
PTCH1-225ENST00000551845 OSR1Q8TAX0 266 aaPredicted RBP8.39□□□□□ -1.07
PTCH1-225ENST00000551845 TCTEX1D2Q8WW35 142 aa8.39□□□□□ -1.07
PTCH1-225ENST00000551845 DDB2Q92466 427 aa8.39□□□□□ -1.07
PTCH1-225ENST00000551845 MOB3AQ96BX8 217 aa8.39□□□□□ -1.07
PTCH1-225ENST00000551845 FBXL15Q9H469 300 aa8.39□□□□□ -1.07
PTCH1-225ENST00000551845 TAS2R8Q9NYW2 309 aa8.39□□□□□ -1.07
PTCH1-225ENST00000551845 METTL1Q9UBP6 276 aaKnown RBP8.39□□□□□ -1.07
PTCH1-225ENST00000551845 LINC00527Q9UJ94 153 aa8.39□□□□□ -1.07
PTCH1-225ENST00000551845 TCRBV4S1A1TA0A5B7 111 aa8.38□□□□□ -1.07
PTCH1-225ENST00000551845 TNFSF12O43508 249 aa8.38□□□□□ -1.07
PTCH1-225ENST00000551845 SPDEFO95238 335 aa8.38□□□□□ -1.07
PTCH1-225ENST00000551845 CRYZL1O95825 349 aa8.38□□□□□ -1.07
PTCH1-225ENST00000551845 CD3DP04234 171 aa8.38□□□□□ -1.07
PTCH1-225ENST00000551845 IGF1P05019 195 aa8.38□□□□□ -1.07
PTCH1-225ENST00000551845 TBPP20226 339 aa8.38□□□□□ -1.07
PTCH1-225ENST00000551845 VDAC1P21796 283 aa8.38□□□□□ -1.07
PTCH1-225ENST00000551845 S100GP29377 79 aa8.38□□□□□ -1.07
PTCH1-225ENST00000551845 RPL30P62888 115 aaKnown RBP8.38□□□□□ -1.07
PTCH1-225ENST00000551845 DGCR2P98153 550 aa8.38□□□□□ -1.07
PTCH1-225ENST00000551845 CD83Q01151 205 aa8.38□□□□□ -1.07
PTCH1-225ENST00000551845 TMEM267Q0VDI3 215 aaPredicted RBP8.38□□□□□ -1.07
PTCH1-225ENST00000551845 CATR1Q13166 79 aa8.38□□□□□ -1.07
PTCH1-225ENST00000551845 VMA21Q3ZAQ7 101 aa8.38□□□□□ -1.07
PTCH1-225ENST00000551845 TEX38Q6PEX7 206 aa8.38□□□□□ -1.07
PTCH1-225ENST00000551845 ZNF562Q6V9R5 426 aa8.38□□□□□ -1.07
PTCH1-225ENST00000551845 ZNF818PQ6ZRF7 136 aa8.38□□□□□ -1.07
PTCH1-225ENST00000551845 ZNF329Q86UD4 541 aa8.38□□□□□ -1.07
PTCH1-225ENST00000551845 COMMD1Q8N668 190 aa8.38□□□□□ -1.07
PTCH1-225ENST00000551845 POC5Q8NA72 575 aa8.38□□□□□ -1.07
PTCH1-225ENST00000551845 WIPF2Q8TF74 440 aaPredicted RBP8.38□□□□□ -1.07
PTCH1-225ENST00000551845 SMIM4Q8WVI0 70 aa8.38□□□□□ -1.07
PTCH1-225ENST00000551845 HARBI1Q96MB7 349 aa8.38□□□□□ -1.07
PTCH1-225ENST00000551845 NOL4LQ96MY1 436 aaPredicted RBP8.38□□□□□ -1.07
PTCH1-225ENST00000551845 CLCC1Q96S66 551 aa8.38□□□□□ -1.07
PTCH1-225ENST00000551845 SOSTQ9BQB4 213 aa8.38□□□□□ -1.07
PTCH1-225ENST00000551845 HSPB9Q9BQS6 159 aa8.38□□□□□ -1.07
PTCH1-225ENST00000551845 OR51J1Q9H342 316 aa8.38□□□□□ -1.07
PTCH1-225ENST00000551845 PKD1L1Q8TDX9 2849 aa8.38□□□□□ -1.07
PTCH1-225ENST00000551845 IGHV7-81A0A0B4J1V7 117 aa8.37□□□□□ -1.07
PTCH1-225ENST00000551845 SRRM4A7MD48 611 aaKnown RBP8.37□□□□□ -1.07
PTCH1-225ENST00000551845 M0QYG6 137 aa8.37□□□□□ -1.07
PTCH1-225ENST00000551845 GPR31O00270 319 aa8.37□□□□□ -1.07
PTCH1-225ENST00000551845 FCN1O00602 326 aa8.37□□□□□ -1.07
PTCH1-225ENST00000551845 GSTZ1O43708 216 aaPredicted RBP8.37□□□□□ -1.07
PTCH1-225ENST00000551845 SLC25A17O43808 307 aa8.37□□□□□ -1.07
PTCH1-225ENST00000551845 RAB3DO95716 219 aa8.37□□□□□ -1.07
PTCH1-225ENST00000551845 OPN1MWP04001 364 aa8.37□□□□□ -1.07
PTCH1-225ENST00000551845 CSF1P09603 554 aa8.37□□□□□ -1.07
PTCH1-225ENST00000551845 OPN1MW2P0DN77 364 aa8.37□□□□□ -1.07
PTCH1-225ENST00000551845 OPN1MW3P0DN78 364 aa8.37□□□□□ -1.07
PTCH1-225ENST00000551845 KIR2DS2P43631 304 aa8.37□□□□□ -1.07
PTCH1-225ENST00000551845 UCP3P55916 312 aa8.37□□□□□ -1.07
PTCH1-225ENST00000551845 CX3CL1P78423 397 aa8.37□□□□□ -1.07
PTCH1-225ENST00000551845 EIF4EBP1Q13541 118 aaPredicted RBP8.37□□□□□ -1.07
PTCH1-225ENST00000551845 STEAP1BQ6NZ63 245 aa8.37□□□□□ -1.07
PTCH1-225ENST00000551845 PPP1R27Q86WC6 154 aa8.37□□□□□ -1.07
PTCH1-225ENST00000551845 ARRDC1Q8N5I2 433 aa8.37□□□□□ -1.07
PTCH1-225ENST00000551845 TEX45Q8NA69 505 aa8.37□□□□□ -1.07
PTCH1-225ENST00000551845 OR4S2Q8NH73 311 aa8.37□□□□□ -1.07
PTCH1-225ENST00000551845 CD300LFQ8TDQ1 290 aa8.37□□□□□ -1.07
PTCH1-225ENST00000551845 CITED2Q99967 270 aaPredicted RBP8.37□□□□□ -1.07
PTCH1-225ENST00000551845 AIFM2Q9BRQ8 373 aa8.37□□□□□ -1.07
PTCH1-225ENST00000551845 THAP7Q9BT49 309 aaPredicted RBP8.37□□□□□ -1.07
PTCH1-225ENST00000551845 TINAGL1Q9GZM7 467 aaPredicted RBP8.37□□□□□ -1.07
PTCH1-225ENST00000551845 DISC1C4P0D8 188 aa8.36□□□□□ -1.07
PTCH1-225ENST00000551845 PGLYRP1O75594 196 aaPredicted RBP8.36□□□□□ -1.07
PTCH1-225ENST00000551845 CNIH1O95406 144 aa8.36□□□□□ -1.07
PTCH1-225ENST00000551845 HRASP01112 189 aa8.36□□□□□ -1.07
PTCH1-225ENST00000551845 IGLV2-23P01705 113 aa8.36□□□□□ -1.07
PTCH1-225ENST00000551845 CD74P04233 296 aa8.36□□□□□ -1.07
PTCH1-225ENST00000551845 CRYGBP07316 175 aa8.36□□□□□ -1.07
PTCH1-225ENST00000551845 PTBP1P26599 531 aaKnown RBP eCLIP8.36□□□□□ -1.07
PTCH1-225ENST00000551845 UBE2KP61086 200 aa8.36□□□□□ -1.07
PTCH1-225ENST00000551845 FXYD3Q14802 87 aa8.36□□□□□ -1.07
PTCH1-225ENST00000551845 MEF2DQ14814 521 aa8.36□□□□□ -1.07
PTCH1-225ENST00000551845 C2orf68Q2NKX9 166 aa8.36□□□□□ -1.07
PTCH1-225ENST00000551845 PYDC2Q56P42 97 aa8.36□□□□□ -1.07
PTCH1-225ENST00000551845 OR2B11Q5JQS5 317 aa8.36□□□□□ -1.07
PTCH1-225ENST00000551845 SPANXN2Q5MJ10 180 aa8.36□□□□□ -1.07
PTCH1-225ENST00000551845 AADACL3Q5VUY0 350 aa8.36□□□□□ -1.07
PTCH1-225ENST00000551845 NDUFA11Q86Y39 141 aa8.36□□□□□ -1.07
PTCH1-225ENST00000551845 SPAG16Q8N0X2 631 aa8.36□□□□□ -1.07
PTCH1-225ENST00000551845 TERB2Q8NHR7 220 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms