RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 OR5M8Q8NGP6 311 aa8.41□□□□□ -1.06
NEK3-203ENST00000551355 RNASE11Q8TAA1 199 aaKnown RBP8.41□□□□□ -1.06
NEK3-203ENST00000551355 GPHA2Q96T91 129 aa8.41□□□□□ -1.06
NEK3-203ENST00000551355 MGAT4CQ9UBM8 478 aa8.41□□□□□ -1.06
NEK3-203ENST00000551355 NUP50Q9UKX7 468 aa8.41□□□□□ -1.06
NEK3-203ENST00000551355 FAM96BQ9Y3D0 163 aa8.41□□□□□ -1.06
NEK3-203ENST00000551355 A0A1B0GU03 582 aa8.4□□□□□ -1.06
NEK3-203ENST00000551355 A0A1W2PPI3 338 aa8.4□□□□□ -1.06
NEK3-203ENST00000551355 C5orf51A6NDU8 294 aa8.4□□□□□ -1.06
NEK3-203ENST00000551355 GOSR2O14653 212 aa8.4□□□□□ -1.06
NEK3-203ENST00000551355 RAMP3O60896 148 aa8.4□□□□□ -1.06
NEK3-203ENST00000551355 PFDN1O60925 122 aa8.4□□□□□ -1.06
NEK3-203ENST00000551355 CRYZL1O95825 349 aa8.4□□□□□ -1.06
NEK3-203ENST00000551355 FBP1P09467 338 aa8.4□□□□□ -1.06
NEK3-203ENST00000551355 GIPP09681 153 aaPredicted RBP8.4□□□□□ -1.06
NEK3-203ENST00000551355 FAM106CPP0CH98 169 aa8.4□□□□□ -1.06
NEK3-203ENST00000551355 HNF1AP20823 631 aa8.4□□□□□ -1.06
NEK3-203ENST00000551355 DYNLT3P51808 116 aa8.4□□□□□ -1.06
NEK3-203ENST00000551355 AKR1C2P52895 323 aa8.4□□□□□ -1.06
NEK3-203ENST00000551355 BRWD1-AS2P59051 145 aa8.4□□□□□ -1.06
NEK3-203ENST00000551355 PRB3Q04118 309 aaPredicted RBP8.4□□□□□ -1.06
NEK3-203ENST00000551355 SCGB2A2Q13296 93 aa8.4□□□□□ -1.06
NEK3-203ENST00000551355 FCN2Q15485 313 aa8.4□□□□□ -1.06
NEK3-203ENST00000551355 AANATQ16613 207 aa8.4□□□□□ -1.06
NEK3-203ENST00000551355 POU2AF1Q16633 256 aa8.4□□□□□ -1.06
NEK3-203ENST00000551355 OR2B11Q5JQS5 317 aa8.4□□□□□ -1.06
NEK3-203ENST00000551355 GGNBP1Q5YKI7 109 aa8.4□□□□□ -1.06
NEK3-203ENST00000551355 THOC7Q6I9Y2 204 aaKnown RBP8.4□□□□□ -1.06
NEK3-203ENST00000551355 C9orf139Q6ZV77 190 aa8.4□□□□□ -1.06
NEK3-203ENST00000551355 LHFPL4Q7Z7J7 247 aa8.4□□□□□ -1.06
NEK3-203ENST00000551355 AKAP14Q86UN6 197 aa8.4□□□□□ -1.06
NEK3-203ENST00000551355 SLC35G3Q8N808 338 aa8.4□□□□□ -1.06
NEK3-203ENST00000551355 VSTM2AQ8TAG5 236 aa8.4□□□□□ -1.06
NEK3-203ENST00000551355 TSNAXQ99598 290 aaKnown RBP8.4□□□□□ -1.06
NEK3-203ENST00000551355 PDCD10Q9BUL8 212 aa8.4□□□□□ -1.06
NEK3-203ENST00000551355 ZNF436Q9C0F3 470 aaPredicted RBP8.4□□□□□ -1.06
NEK3-203ENST00000551355 MEGF9Q9H1U4 602 aa8.4□□□□□ -1.06
NEK3-203ENST00000551355 ZFP57Q9NU63 452 aa8.4□□□□□ -1.06
NEK3-203ENST00000551355 TMEM160Q9NX00 188 aa8.4□□□□□ -1.06
NEK3-203ENST00000551355 COA4Q9NYJ1 87 aa8.4□□□□□ -1.06
NEK3-203ENST00000551355 HILPDAQ9Y5L2 63 aa8.4□□□□□ -1.06
NEK3-203ENST00000551355 MMP24Q9Y5R2 645 aa8.4□□□□□ -1.06
NEK3-203ENST00000551355 DOCK11Q5JSL3 2073 aa8.4□□□□□ -1.06
NEK3-203ENST00000551355 PDZD2O15018 2839 aa8.4□□□□□ -1.06
NEK3-203ENST00000551355 CSMD2Q7Z408 3487 aa8.39□□□□□ -1.07
NEK3-203ENST00000551355 A0A1W2PRD5 423 aa8.39□□□□□ -1.07
NEK3-203ENST00000551355 A0A1W2PRF3 423 aa8.39□□□□□ -1.07
NEK3-203ENST00000551355 A0A1W2PRM7 423 aa8.39□□□□□ -1.07
NEK3-203ENST00000551355 MARCH11A6NNE9 402 aa8.39□□□□□ -1.07
NEK3-203ENST00000551355 TIMM23O14925 209 aa8.39□□□□□ -1.07
NEK3-203ENST00000551355 SHOXO15266 292 aa8.39□□□□□ -1.07
NEK3-203ENST00000551355 CCNKO75909 580 aa8.39□□□□□ -1.07
NEK3-203ENST00000551355 OR2A4O95047 310 aa8.39□□□□□ -1.07
NEK3-203ENST00000551355 S1PR2O95136 353 aa8.39□□□□□ -1.07
NEK3-203ENST00000551355 KRASP01116 189 aa8.39□□□□□ -1.07
NEK3-203ENST00000551355 FSHBP01225 129 aa8.39□□□□□ -1.07
NEK3-203ENST00000551355 FGF2P09038 288 aa8.39□□□□□ -1.07
NEK3-203ENST00000551355 HOXB5P09067 269 aa8.39□□□□□ -1.07
NEK3-203ENST00000551355 IGHV4-38-2P0DP08 117 aa8.39□□□□□ -1.07
NEK3-203ENST00000551355 RAP2BP61225 183 aa8.39□□□□□ -1.07
NEK3-203ENST00000551355 SRSF4Q08170 494 aaKnown RBP8.39□□□□□ -1.07
NEK3-203ENST00000551355 FGL1Q08830 312 aa8.39□□□□□ -1.07
NEK3-203ENST00000551355 DIAPH2-AS1Q14236 149 aa8.39□□□□□ -1.07
NEK3-203ENST00000551355 NMSQ5H8A3 153 aa8.39□□□□□ -1.07
NEK3-203ENST00000551355 KLF17Q5JT82 389 aaPredicted RBP8.39□□□□□ -1.07
NEK3-203ENST00000551355 H2BFWTQ7Z2G1 175 aa8.39□□□□□ -1.07
NEK3-203ENST00000551355 LYZL2Q7Z4W2 148 aa8.39□□□□□ -1.07
NEK3-203ENST00000551355 DMBX1Q8NFW5 382 aa8.39□□□□□ -1.07
NEK3-203ENST00000551355 OR11H7Q8NGC8 314 aa8.39□□□□□ -1.07
NEK3-203ENST00000551355 OR8H1Q8NGG4 311 aa8.39□□□□□ -1.07
NEK3-203ENST00000551355 OR2T10Q8NGZ9 312 aa8.39□□□□□ -1.07
NEK3-203ENST00000551355 OR4A5Q8NH83 315 aa8.39□□□□□ -1.07
NEK3-203ENST00000551355 LHFPL5Q8TAF8 219 aa8.39□□□□□ -1.07
NEK3-203ENST00000551355 PPP1R14BQ96C90 147 aa8.39□□□□□ -1.07
NEK3-203ENST00000551355 R3HDM4Q96D70 268 aa8.39□□□□□ -1.07
NEK3-203ENST00000551355 SEC22AQ96IW7 307 aa8.39□□□□□ -1.07
NEK3-203ENST00000551355 RHOVQ96L33 236 aa8.39□□□□□ -1.07
NEK3-203ENST00000551355 C2orf50Q96LR7 162 aa8.39□□□□□ -1.07
NEK3-203ENST00000551355 OR2A7Q96R45 310 aa8.39□□□□□ -1.07
NEK3-203ENST00000551355 NMES1Q9C002 83 aa8.39□□□□□ -1.07
NEK3-203ENST00000551355 MS4A7Q9GZW8 240 aaPredicted RBP8.39□□□□□ -1.07
NEK3-203ENST00000551355 PRRC2AP48634 2157 aaKnown RBP8.39□□□□□ -1.07
NEK3-203ENST00000551355 C13orf42A0A1B0GVH6 325 aa8.38□□□□□ -1.07
NEK3-203ENST00000551355 A8MV72 311 aaPredicted RBP8.38□□□□□ -1.07
NEK3-203ENST00000551355 FAM25EA8MYX2 175 aa8.38□□□□□ -1.07
NEK3-203ENST00000551355 ADAP1O75689 374 aa8.38□□□□□ -1.07
NEK3-203ENST00000551355 VENTXO95231 258 aa8.38□□□□□ -1.07
NEK3-203ENST00000551355 SPDEFO95238 335 aa8.38□□□□□ -1.07
NEK3-203ENST00000551355 MOSP00540 346 aa8.38□□□□□ -1.07
NEK3-203ENST00000551355 AVPP01185 164 aa8.38□□□□□ -1.07
NEK3-203ENST00000551355 IGKV1-39P01597 117 aa8.38□□□□□ -1.07
NEK3-203ENST00000551355 IGKV1-16P04430 117 aa8.38□□□□□ -1.07
NEK3-203ENST00000551355 IGKV1D-39P04432 117 aa8.38□□□□□ -1.07
NEK3-203ENST00000551355 CXCL3P19876 107 aa8.38□□□□□ -1.07
NEK3-203ENST00000551355 LINC00205P59089 165 aa8.38□□□□□ -1.07
NEK3-203ENST00000551355 RPS16P62249 146 aaKnown RBP8.38□□□□□ -1.07
NEK3-203ENST00000551355 EBI3Q14213 229 aa8.38□□□□□ -1.07
NEK3-203ENST00000551355 IAH1Q2TAA2 248 aaPredicted RBP8.38□□□□□ -1.07
NEK3-203ENST00000551355 VMA21Q3ZAQ7 101 aa8.38□□□□□ -1.07
NEK3-203ENST00000551355 LDLRAD2Q5SZI1 272 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms