RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 TRAV41A0A0B4J266 112 aa12.08□□□□□ -0.48
PRPF40B-211ENST00000551063 CA2P00918 260 aa12.08□□□□□ -0.48
PRPF40B-211ENST00000551063 PSMB8P28062 276 aa12.08□□□□□ -0.48
PRPF40B-211ENST00000551063 EIF4EBP1Q13541 118 aaPredicted RBP12.08□□□□□ -0.48
PRPF40B-211ENST00000551063 C19orf54Q5BKX5 351 aa12.08□□□□□ -0.48
PRPF40B-211ENST00000551063 ZNF562Q6V9R5 426 aa12.08□□□□□ -0.48
PRPF40B-211ENST00000551063 SNX29P2Q8IUI4 249 aa12.08□□□□□ -0.48
PRPF40B-211ENST00000551063 OR5H2Q8NGV7 314 aa12.08□□□□□ -0.48
PRPF40B-211ENST00000551063 C15orf40Q8WUR7 153 aa12.08□□□□□ -0.48
PRPF40B-211ENST00000551063 EHFQ9NZC4 300 aa12.08□□□□□ -0.48
PRPF40B-211ENST00000551063 G3V318 75 aa12.07□□□□□ -0.48
PRPF40B-211ENST00000551063 FCN1O00602 326 aa12.07□□□□□ -0.48
PRPF40B-211ENST00000551063 CRYZL1O95825 349 aa12.07□□□□□ -0.48
PRPF40B-211ENST00000551063 PF4P02776 101 aa12.07□□□□□ -0.48
PRPF40B-211ENST00000551063 CRYGBP07316 175 aa12.07□□□□□ -0.48
PRPF40B-211ENST00000551063 RCVRNP35243 200 aa12.07□□□□□ -0.48
PRPF40B-211ENST00000551063 UBE2KP61086 200 aa12.07□□□□□ -0.48
PRPF40B-211ENST00000551063 HERV-K104P61576 105 aa12.07□□□□□ -0.48
PRPF40B-211ENST00000551063 RPL30P62888 115 aaKnown RBP12.07□□□□□ -0.48
PRPF40B-211ENST00000551063 TMEM267Q0VDI3 215 aaPredicted RBP12.07□□□□□ -0.48
PRPF40B-211ENST00000551063 DYRK1AQ13627 763 aa12.07□□□□□ -0.48
PRPF40B-211ENST00000551063 VMA21Q3ZAQ7 101 aa12.07□□□□□ -0.48
PRPF40B-211ENST00000551063 PPP1R27Q86WC6 154 aa12.07□□□□□ -0.48
PRPF40B-211ENST00000551063 MINDY2Q8NBR6 621 aa12.07□□□□□ -0.48
PRPF40B-211ENST00000551063 SECTM1Q8WVN6 248 aa12.07□□□□□ -0.48
PRPF40B-211ENST00000551063 ARPC1AQ92747 370 aa12.07□□□□□ -0.48
PRPF40B-211ENST00000551063 BORCS5Q969J3 196 aa12.07□□□□□ -0.48
PRPF40B-211ENST00000551063 CCL28Q9NRJ3 127 aa12.07□□□□□ -0.48
PRPF40B-211ENST00000551063 TPSG1Q9NRR2 321 aa12.07□□□□□ -0.48
PRPF40B-211ENST00000551063 EXTL2Q9UBQ6 330 aa12.07□□□□□ -0.48
PRPF40B-211ENST00000551063 FBXO7Q9Y3I1 522 aa12.07□□□□□ -0.48
PRPF40B-211ENST00000551063 WSB1Q9Y6I7 421 aa12.07□□□□□ -0.48
PRPF40B-211ENST00000551063 SRRM4A7MD48 611 aaKnown RBP12.06□□□□□ -0.48
PRPF40B-211ENST00000551063 NUDT19A8MXV4 375 aa12.06□□□□□ -0.48
PRPF40B-211ENST00000551063 FCGR3BO75015 233 aa12.06□□□□□ -0.48
PRPF40B-211ENST00000551063 RPLP1P05386 114 aaKnown RBP12.06□□□□□ -0.48
PRPF40B-211ENST00000551063 KIR2DS2P43631 304 aa12.06□□□□□ -0.48
PRPF40B-211ENST00000551063 CDX1P47902 265 aaPredicted RBP12.06□□□□□ -0.48
PRPF40B-211ENST00000551063 ECSCRQ19T08 205 aa12.06□□□□□ -0.48
PRPF40B-211ENST00000551063 DHRS11Q6UWP2 260 aa12.06□□□□□ -0.48
PRPF40B-211ENST00000551063 ZNF695Q8IW36 515 aa12.06□□□□□ -0.48
PRPF40B-211ENST00000551063 TEX45Q8NA69 505 aa12.06□□□□□ -0.48
PRPF40B-211ENST00000551063 KLHL30-AS1Q8NEE0 82 aa12.06□□□□□ -0.48
PRPF40B-211ENST00000551063 WFDC9Q8NEX5 89 aa12.06□□□□□ -0.48
PRPF40B-211ENST00000551063 OR4S2Q8NH73 311 aa12.06□□□□□ -0.48
PRPF40B-211ENST00000551063 DYNC2LI1Q8TCX1 351 aa12.06□□□□□ -0.48
PRPF40B-211ENST00000551063 MYOZ3Q8TDC0 251 aa12.06□□□□□ -0.48
PRPF40B-211ENST00000551063 ABHD5Q8WTS1 349 aa12.06□□□□□ -0.48
PRPF40B-211ENST00000551063 TCTEX1D2Q8WW35 142 aa12.06□□□□□ -0.48
PRPF40B-211ENST00000551063 ISOC1Q96CN7 298 aa12.06□□□□□ -0.48
PRPF40B-211ENST00000551063 CLCC1Q96S66 551 aa12.06□□□□□ -0.48
PRPF40B-211ENST00000551063 SLC5A7Q9GZV3 580 aa12.06□□□□□ -0.48
PRPF40B-211ENST00000551063 TAS2R8Q9NYW2 309 aa12.06□□□□□ -0.48
PRPF40B-211ENST00000551063 FOXA2Q9Y261 457 aaPredicted RBP12.06□□□□□ -0.48
PRPF40B-211ENST00000551063 NUBP2Q9Y5Y2 271 aa12.06□□□□□ -0.48
PRPF40B-211ENST00000551063 NOTCH3Q9UM47 2321 aa12.06□□□□□ -0.48
PRPF40B-211ENST00000551063 H3BMQ9 156 aa12.05□□□□□ -0.48
PRPF40B-211ENST00000551063 CREBL2O60519 120 aaPredicted RBP12.05□□□□□ -0.48
PRPF40B-211ENST00000551063 IGLV1-40P01703 118 aa12.05□□□□□ -0.48
PRPF40B-211ENST00000551063 PMP2P02689 132 aa12.05□□□□□ -0.48
PRPF40B-211ENST00000551063 EGR2P11161 476 aaPredicted RBP12.05□□□□□ -0.48
PRPF40B-211ENST00000551063 HRH1P35367 487 aa12.05□□□□□ -0.48
PRPF40B-211ENST00000551063 FXYD4P59646 89 aa12.05□□□□□ -0.48
PRPF40B-211ENST00000551063 FXYD3Q14802 87 aa12.05□□□□□ -0.48
PRPF40B-211ENST00000551063 SAMD5Q5TGI4 173 aa12.05□□□□□ -0.48
PRPF40B-211ENST00000551063 PYHIN1Q6K0P9 492 aa12.05□□□□□ -0.48
PRPF40B-211ENST00000551063 ETV3LQ6ZN32 361 aa12.05□□□□□ -0.48
PRPF40B-211ENST00000551063 C8orf86Q6ZUL3 223 aa12.05□□□□□ -0.48
PRPF40B-211ENST00000551063 TMEM17Q86X19 198 aa12.05□□□□□ -0.48
PRPF40B-211ENST00000551063 MFSD4AQ8N468 514 aa12.05□□□□□ -0.48
PRPF40B-211ENST00000551063 MOB3AQ96BX8 217 aa12.05□□□□□ -0.48
PRPF40B-211ENST00000551063 ZNF2Q9BSG1 426 aaPredicted RBP12.05□□□□□ -0.48
PRPF40B-211ENST00000551063 MIXL1Q9H2W2 232 aa12.05□□□□□ -0.48
PRPF40B-211ENST00000551063 ARPC1BO15143 372 aaKnown RBP12.04□□□□□ -0.48
PRPF40B-211ENST00000551063 RGS5O15539 181 aa12.04□□□□□ -0.48
PRPF40B-211ENST00000551063 HLA-DMAP28067 261 aa12.04□□□□□ -0.48
PRPF40B-211ENST00000551063 MYCNOSP40205 109 aa12.04□□□□□ -0.48
PRPF40B-211ENST00000551063 RFX2P48378 723 aa12.04□□□□□ -0.48
PRPF40B-211ENST00000551063 SSBP2P81877 361 aaPredicted RBP12.04□□□□□ -0.48
PRPF40B-211ENST00000551063 CATR1Q13166 79 aa12.04□□□□□ -0.48
PRPF40B-211ENST00000551063 AKIRIN2Q53H80 203 aa12.04□□□□□ -0.48
PRPF40B-211ENST00000551063 ACTBL2Q562R1 376 aa12.04□□□□□ -0.48
PRPF40B-211ENST00000551063 TMEM65Q6PI78 240 aa12.04□□□□□ -0.48
PRPF40B-211ENST00000551063 LCNL1Q6ZST4 164 aa12.04□□□□□ -0.48
PRPF40B-211ENST00000551063 C18orf65Q6ZTR6 163 aa12.04□□□□□ -0.48
PRPF40B-211ENST00000551063 LYSMD2Q8IV50 215 aa12.04□□□□□ -0.48
PRPF40B-211ENST00000551063 OR5M8Q8NGP6 311 aa12.04□□□□□ -0.48
PRPF40B-211ENST00000551063 OR6F1Q8NGZ6 308 aa12.04□□□□□ -0.48
PRPF40B-211ENST00000551063 TMEM68Q96MH6 324 aa12.04□□□□□ -0.48
PRPF40B-211ENST00000551063 FAM103A1Q9BTL3 118 aaKnown RBP12.04□□□□□ -0.48
PRPF40B-211ENST00000551063 A3GALT2U3KPV4 340 aa12.04□□□□□ -0.48
PRPF40B-211ENST00000551063 NOTCH1P46531 2555 aa12.04□□□□□ -0.48
PRPF40B-211ENST00000551063 A0A1W2PN81 502 aa12.03□□□□□ -0.48
PRPF40B-211ENST00000551063 CTDSP2O14595 271 aa12.03□□□□□ -0.48
PRPF40B-211ENST00000551063 RBFOX2O43251 390 aaKnown RBP eCLIP12.03□□□□□ -0.48
PRPF40B-211ENST00000551063 SAA1P0DJI8 122 aaPredicted RBP12.03□□□□□ -0.48
PRPF40B-211ENST00000551063 CD33P20138 364 aa12.03□□□□□ -0.48
PRPF40B-211ENST00000551063 CHRNA7P36544 502 aa12.03□□□□□ -0.48
PRPF40B-211ENST00000551063 MRPS10P82664 201 aaKnown RBP12.03□□□□□ -0.48
PRPF40B-211ENST00000551063 PRSS8Q16651 343 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms