RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 TRGV10A0A0A0MS01 117 aa16.27■□□□□ 0.2
CTDSP2-204ENST00000548823 RPS10-NUDT3A0A1W2PQS6 291 aa16.27■□□□□ 0.2
CTDSP2-204ENST00000548823 LINC00862A6NCI5 91 aa16.27■□□□□ 0.2
CTDSP2-204ENST00000548823 ZNF729A6NN14 1252 aaPredicted RBP16.27■□□□□ 0.2
CTDSP2-204ENST00000548823 TAAR5O14804 337 aa16.27■□□□□ 0.2
CTDSP2-204ENST00000548823 TNFSF12O43508 249 aa16.27■□□□□ 0.2
CTDSP2-204ENST00000548823 NDUFA2O43678 99 aa16.27■□□□□ 0.2
CTDSP2-204ENST00000548823 GYPAP02724 150 aa16.27■□□□□ 0.2
CTDSP2-204ENST00000548823 PPP1CCP36873 323 aaKnown RBP16.27■□□□□ 0.2
CTDSP2-204ENST00000548823 EDDM3BP56851 147 aa16.27■□□□□ 0.2
CTDSP2-204ENST00000548823 LOXL3P58215 753 aa16.27■□□□□ 0.2
CTDSP2-204ENST00000548823 RAB14P61106 215 aa16.27■□□□□ 0.2
CTDSP2-204ENST00000548823 MEF2CQ06413 473 aaPredicted RBP16.27■□□□□ 0.2
CTDSP2-204ENST00000548823 CATR1Q13166 79 aa16.27■□□□□ 0.2
CTDSP2-204ENST00000548823 MORN2Q502X0 79 aa16.27■□□□□ 0.2
CTDSP2-204ENST00000548823 OR8H3Q8N146 312 aa16.27■□□□□ 0.2
CTDSP2-204ENST00000548823 STOML3Q8TAV4 291 aa16.27■□□□□ 0.2
CTDSP2-204ENST00000548823 ST8SIA2Q92186 375 aa16.27■□□□□ 0.2
CTDSP2-204ENST00000548823 CCL13Q99616 98 aa16.27■□□□□ 0.2
CTDSP2-204ENST00000548823 OR2D2Q9H210 308 aa16.27■□□□□ 0.2
CTDSP2-204ENST00000548823 KAAG1Q9UBP8 84 aa16.27■□□□□ 0.2
CTDSP2-204ENST00000548823 KBTBD11-OT1A0A1B0GTJ5 212 aa16.26■□□□□ 0.19
CTDSP2-204ENST00000548823 A0A1B0GU03 582 aa16.26■□□□□ 0.19
CTDSP2-204ENST00000548823 M0QZ24 198 aa16.26■□□□□ 0.19
CTDSP2-204ENST00000548823 IGHV2-5P01817 119 aa16.26■□□□□ 0.19
CTDSP2-204ENST00000548823 MMP9P14780 707 aa16.26■□□□□ 0.19
CTDSP2-204ENST00000548823 C17orf58Q2M2W7 97 aa16.26■□□□□ 0.19
CTDSP2-204ENST00000548823 GPR157Q5UAW9 335 aa16.26■□□□□ 0.19
CTDSP2-204ENST00000548823 THOC7Q6I9Y2 204 aaKnown RBP16.26■□□□□ 0.19
CTDSP2-204ENST00000548823 DEFB108BQ8NET1 73 aa16.26■□□□□ 0.19
CTDSP2-204ENST00000548823 OR10A7Q8NGE5 316 aa16.26■□□□□ 0.19
CTDSP2-204ENST00000548823 OR52M1Q8NGK5 317 aa16.26■□□□□ 0.19
CTDSP2-204ENST00000548823 OR51H1Q8NH63 302 aa16.26■□□□□ 0.19
CTDSP2-204ENST00000548823 TAF15Q92804 592 aaKnown RBP eCLIP16.26■□□□□ 0.19
CTDSP2-204ENST00000548823 GPHA2Q96T91 129 aa16.26■□□□□ 0.19
CTDSP2-204ENST00000548823 AGMATQ9BSE5 352 aa16.26■□□□□ 0.19
CTDSP2-204ENST00000548823 DCAF16Q9NXF7 216 aa16.26■□□□□ 0.19
CTDSP2-204ENST00000548823 TAS2R3Q9NYW6 316 aa16.26■□□□□ 0.19
CTDSP2-204ENST00000548823 CLN8Q9UBY8 286 aa16.26■□□□□ 0.19
CTDSP2-204ENST00000548823 NUP50Q9UKX7 468 aa16.26■□□□□ 0.19
CTDSP2-204ENST00000548823 P2RY1P47900 373 aa16.26■□□□□ 0.19
CTDSP2-204ENST00000548823 ID3Q02535 119 aa16.26■□□□□ 0.19
CTDSP2-204ENST00000548823 ZNF585BQ52M93 769 aa16.26■□□□□ 0.19
CTDSP2-204ENST00000548823 AVPI1Q5T686 147 aa16.26■□□□□ 0.19
CTDSP2-204ENST00000548823 RFESDQ8TAC1 157 aa16.26■□□□□ 0.19
CTDSP2-204ENST00000548823 FAM210AQ96ND0 272 aa16.26■□□□□ 0.19
CTDSP2-204ENST00000548823 HSD17B10Q99714 261 aaKnown RBP16.26■□□□□ 0.19
CTDSP2-204ENST00000548823 C11orf1Q9H5F2 150 aa16.26■□□□□ 0.19
CTDSP2-204ENST00000548823 LSM5Q9Y4Y9 91 aaKnown RBP16.26■□□□□ 0.19
CTDSP2-204ENST00000548823 IGHV1-69-2A0A0G2JMI3 117 aa16.25■□□□□ 0.19
CTDSP2-204ENST00000548823 A0A1B0GUS0 222 aa16.25■□□□□ 0.19
CTDSP2-204ENST00000548823 hADV38S2A0JD32 116 aa16.25■□□□□ 0.19
CTDSP2-204ENST00000548823 MSGN1A6NI15 193 aa16.25■□□□□ 0.19
CTDSP2-204ENST00000548823 ADAM20O43506 726 aa16.25■□□□□ 0.19
CTDSP2-204ENST00000548823 PITX3O75364 302 aa16.25■□□□□ 0.19
CTDSP2-204ENST00000548823 SELLP14151 372 aa16.25■□□□□ 0.19
CTDSP2-204ENST00000548823 RPL12P30050 165 aaKnown RBP16.25■□□□□ 0.19
CTDSP2-204ENST00000548823 NKX2-1P43699 371 aaPredicted RBP16.25■□□□□ 0.19
CTDSP2-204ENST00000548823 RAB7AP51149 207 aa16.25■□□□□ 0.19
CTDSP2-204ENST00000548823 FAM216BQ8N7L0 139 aa16.25■□□□□ 0.19
CTDSP2-204ENST00000548823 WFDC12Q8WWY7 111 aa16.25■□□□□ 0.19
CTDSP2-204ENST00000548823 ZNF471Q9BX82 626 aaPredicted RBP16.25■□□□□ 0.19
CTDSP2-204ENST00000548823 GFOD1Q9NXC2 390 aa16.25■□□□□ 0.19
CTDSP2-204ENST00000548823 GNG12Q9UBI6 72 aa16.25■□□□□ 0.19
CTDSP2-204ENST00000548823 AUP1Q9Y679 476 aa16.25■□□□□ 0.19
CTDSP2-204ENST00000548823 LINC00312Q9Y6C7 94 aa16.25■□□□□ 0.19
CTDSP2-204ENST00000548823 F5H0A9 414 aaPredicted RBP16.24■□□□□ 0.19
CTDSP2-204ENST00000548823 ATG12O94817 140 aa16.24■□□□□ 0.19
CTDSP2-204ENST00000548823 IGKV1-39P01597 117 aa16.24■□□□□ 0.19
CTDSP2-204ENST00000548823 IGKV1D-39P04432 117 aa16.24■□□□□ 0.19
CTDSP2-204ENST00000548823 EIF5AP63241 154 aaKnown RBP16.24■□□□□ 0.19
CTDSP2-204ENST00000548823 C1QL4Q86Z23 238 aa16.24■□□□□ 0.19
CTDSP2-204ENST00000548823 FAM219AQ8IW50 185 aa16.24■□□□□ 0.19
CTDSP2-204ENST00000548823 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.24■□□□□ 0.19
CTDSP2-204ENST00000548823 CCL17Q92583 94 aa16.24■□□□□ 0.19
CTDSP2-204ENST00000548823 C5orf30Q96GV9 206 aa16.24■□□□□ 0.19
CTDSP2-204ENST00000548823 ZNF48Q96MX3 618 aaPredicted RBP16.24■□□□□ 0.19
CTDSP2-204ENST00000548823 CITED1Q99966 193 aa16.24■□□□□ 0.19
CTDSP2-204ENST00000548823 CYTL1Q9NRR1 136 aa16.24■□□□□ 0.19
CTDSP2-204ENST00000548823 RYR3Q15413 4870 aa16.23■□□□□ 0.19
CTDSP2-204ENST00000548823 IGHV3-43A0A0B4J1X8 118 aa16.23■□□□□ 0.19
CTDSP2-204ENST00000548823 A0A1B0GW55 424 aa16.23■□□□□ 0.19
CTDSP2-204ENST00000548823 TIMM23O14925 209 aa16.23■□□□□ 0.19
CTDSP2-204ENST00000548823 SPDEFO95238 335 aa16.23■□□□□ 0.19
CTDSP2-204ENST00000548823 SCGB1D2O95969 90 aa16.23■□□□□ 0.19
CTDSP2-204ENST00000548823 DUX4L2P0CJ85 424 aa16.23■□□□□ 0.19
CTDSP2-204ENST00000548823 DUX4L3P0CJ86 424 aa16.23■□□□□ 0.19
CTDSP2-204ENST00000548823 DUX4L4P0CJ87 422 aa16.23■□□□□ 0.19
CTDSP2-204ENST00000548823 DUX4L5P0CJ88 424 aa16.23■□□□□ 0.19
CTDSP2-204ENST00000548823 DUX4L6P0CJ89 424 aa16.23■□□□□ 0.19
CTDSP2-204ENST00000548823 DUX4L7P0CJ90 424 aa16.23■□□□□ 0.19
CTDSP2-204ENST00000548823 IGHV3-43DP0DP04 118 aa16.23■□□□□ 0.19
CTDSP2-204ENST00000548823 PVALBP20472 110 aaPredicted RBP16.23■□□□□ 0.19
CTDSP2-204ENST00000548823 OMGP23515 440 aa16.23■□□□□ 0.19
CTDSP2-204ENST00000548823 DUX4L9Q6RFH8 374 aaPredicted RBP16.23■□□□□ 0.19
CTDSP2-204ENST00000548823 TCF23Q7RTU1 214 aa16.23■□□□□ 0.19
CTDSP2-204ENST00000548823 BCL6BQ8N143 479 aaPredicted RBP16.23■□□□□ 0.19
CTDSP2-204ENST00000548823 DMBX1Q8NFW5 382 aa16.23■□□□□ 0.19
CTDSP2-204ENST00000548823 GPR146Q96CH1 333 aa16.23■□□□□ 0.19
CTDSP2-204ENST00000548823 MED9Q9NWA0 146 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms