RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 NR2C2APQ86WQ0 139 aa13.32□□□□□ -0.28
CHMP1A-205ENST00000548650 H1FOOQ8IZA3 346 aaPredicted RBP13.32□□□□□ -0.28
CHMP1A-205ENST00000548650 BVESQ8NE79 360 aa13.32□□□□□ -0.28
CHMP1A-205ENST00000548650 DDB2Q92466 427 aa13.32□□□□□ -0.28
CHMP1A-205ENST00000548650 CNBD2Q96M20 576 aa13.32□□□□□ -0.28
CHMP1A-205ENST00000548650 RANGRFQ9HD47 186 aaPredicted RBP13.32□□□□□ -0.28
CHMP1A-205ENST00000548650 IGKV1D-8A0A087WSZ0 117 aa13.31□□□□□ -0.28
CHMP1A-205ENST00000548650 SHOXO15266 292 aa13.31□□□□□ -0.28
CHMP1A-205ENST00000548650 MYL9P24844 172 aa13.31□□□□□ -0.28
CHMP1A-205ENST00000548650 TAGLNQ01995 201 aaKnown RBP13.31□□□□□ -0.28
CHMP1A-205ENST00000548650 CBX3Q13185 183 aa13.31□□□□□ -0.28
CHMP1A-205ENST00000548650 Q6ZS49 121 aa13.31□□□□□ -0.28
CHMP1A-205ENST00000548650 TMEM68Q96MH6 324 aa13.31□□□□□ -0.28
CHMP1A-205ENST00000548650 GINS4Q9BRT9 223 aa13.31□□□□□ -0.28
CHMP1A-205ENST00000548650 RSRP1Q9BUV0 290 aa13.31□□□□□ -0.28
CHMP1A-205ENST00000548650 ELOVL1Q9BW60 279 aa13.31□□□□□ -0.28
CHMP1A-205ENST00000548650 TINAGL1Q9GZM7 467 aaPredicted RBP13.31□□□□□ -0.28
CHMP1A-205ENST00000548650 BLOC1S6Q9UL45 172 aa13.31□□□□□ -0.28
CHMP1A-205ENST00000548650 A0A0G2JLM5 398 aa13.3□□□□□ -0.28
CHMP1A-205ENST00000548650 TRDV1A0A1B0GX56 115 aa13.3□□□□□ -0.28
CHMP1A-205ENST00000548650 ANKRD34BA5PLL1 514 aa13.3□□□□□ -0.28
CHMP1A-205ENST00000548650 RAB3BP20337 219 aa13.3□□□□□ -0.28
CHMP1A-205ENST00000548650 DUTP33316 252 aaKnown RBP13.3□□□□□ -0.28
CHMP1A-205ENST00000548650 DYRK1AQ13627 763 aa13.3□□□□□ -0.28
CHMP1A-205ENST00000548650 MUC7Q8TAX7 377 aa13.3□□□□□ -0.28
CHMP1A-205ENST00000548650 ELF5Q9UKW6 265 aaPredicted RBP13.3□□□□□ -0.28
CHMP1A-205ENST00000548650 RYR2Q92736 4967 aa13.3□□□□□ -0.28
CHMP1A-205ENST00000548650 LINC00473A8K010 186 aa13.29□□□□□ -0.28
CHMP1A-205ENST00000548650 RBMXL2O75526 392 aaKnown RBP13.29□□□□□ -0.28
CHMP1A-205ENST00000548650 TRBV12-3P01733 135 aa13.29□□□□□ -0.28
CHMP1A-205ENST00000548650 IGHV4-30-4P0DP06 118 aa13.29□□□□□ -0.28
CHMP1A-205ENST00000548650 RRASP10301 218 aa13.29□□□□□ -0.28
CHMP1A-205ENST00000548650 UBE2KP61086 200 aa13.29□□□□□ -0.28
CHMP1A-205ENST00000548650 ARFRP1Q13795 201 aa13.29□□□□□ -0.28
CHMP1A-205ENST00000548650 KLF5Q13887 457 aaPredicted RBP13.29□□□□□ -0.28
CHMP1A-205ENST00000548650 C22orf42Q6IC83 251 aa13.29□□□□□ -0.28
CHMP1A-205ENST00000548650 IL34Q6ZMJ4 242 aa13.29□□□□□ -0.28
CHMP1A-205ENST00000548650 ANKRD13BQ86YJ7 626 aa13.29□□□□□ -0.28
CHMP1A-205ENST00000548650 Q8N1Y9 231 aa13.29□□□□□ -0.28
CHMP1A-205ENST00000548650 ADTRPQ96IZ2 230 aa13.29□□□□□ -0.28
CHMP1A-205ENST00000548650 RAB26Q9ULW5 256 aa13.29□□□□□ -0.28
CHMP1A-205ENST00000548650 RBM7Q9Y580 266 aaKnown RBP13.29□□□□□ -0.28
CHMP1A-205ENST00000548650 SMIM30A4D0T7 59 aa13.28□□□□□ -0.28
CHMP1A-205ENST00000548650 METTL21EPA6NDL7 271 aa13.28□□□□□ -0.28
CHMP1A-205ENST00000548650 CRYZL1O95825 349 aa13.28□□□□□ -0.28
CHMP1A-205ENST00000548650 APELAP0DMC3 54 aa13.28□□□□□ -0.28
CHMP1A-205ENST00000548650 GALP22466 123 aa13.28□□□□□ -0.28
CHMP1A-205ENST00000548650 AADACP22760 399 aa13.28□□□□□ -0.28
CHMP1A-205ENST00000548650 DTYMKP23919 212 aa13.28□□□□□ -0.28
CHMP1A-205ENST00000548650 PRSS8Q16651 343 aa13.28□□□□□ -0.28
CHMP1A-205ENST00000548650 VMA21Q3ZAQ7 101 aa13.28□□□□□ -0.28
CHMP1A-205ENST00000548650 CASC10Q5T4H9 136 aa13.28□□□□□ -0.28
CHMP1A-205ENST00000548650 ZNF343Q6P1L6 599 aa13.28□□□□□ -0.28
CHMP1A-205ENST00000548650 IDO2Q6ZQW0 420 aa13.28□□□□□ -0.28
CHMP1A-205ENST00000548650 ADAD2Q8NCV1 583 aaKnown RBP13.28□□□□□ -0.28
CHMP1A-205ENST00000548650 OR9G4Q8NGQ1 327 aa13.28□□□□□ -0.28
CHMP1A-205ENST00000548650 SRSF12Q8WXF0 261 aaKnown RBP13.28□□□□□ -0.28
CHMP1A-205ENST00000548650 TM2D3Q9BRN9 247 aa13.28□□□□□ -0.28
CHMP1A-205ENST00000548650 COA4Q9NYJ1 87 aa13.28□□□□□ -0.28
CHMP1A-205ENST00000548650 ADAM30Q9UKF2 790 aa13.28□□□□□ -0.28
CHMP1A-205ENST00000548650 A8MZ25 164 aa13.27□□□□□ -0.29
CHMP1A-205ENST00000548650 TALDO1P37837 337 aa13.27□□□□□ -0.29
CHMP1A-205ENST00000548650 SYNJ2BPP57105 145 aa13.27□□□□□ -0.29
CHMP1A-205ENST00000548650 GABARAPL2P60520 117 aa13.27□□□□□ -0.29
CHMP1A-205ENST00000548650 TNXAQ16473 311 aa13.27□□□□□ -0.29
CHMP1A-205ENST00000548650 TEX45Q8NA69 505 aa13.27□□□□□ -0.29
CHMP1A-205ENST00000548650 PHB2Q99623 299 aa13.27□□□□□ -0.29
CHMP1A-205ENST00000548650 ATG5Q9H1Y0 275 aa13.27□□□□□ -0.29
CHMP1A-205ENST00000548650 ZMAT4Q9H898 229 aa13.27□□□□□ -0.29
CHMP1A-205ENST00000548650 C19orf73Q9NVV2 129 aa13.27□□□□□ -0.29
CHMP1A-205ENST00000548650 PEF1Q9UBV8 284 aaKnown RBP13.27□□□□□ -0.29
CHMP1A-205ENST00000548650 RRP15Q9Y3B9 282 aaKnown RBP13.27□□□□□ -0.29
CHMP1A-205ENST00000548650 MSGN1A6NI15 193 aa13.26□□□□□ -0.29
CHMP1A-205ENST00000548650 SAA1P0DJI8 122 aaPredicted RBP13.26□□□□□ -0.29
CHMP1A-205ENST00000548650 ARL6IP1Q15041 203 aa13.26□□□□□ -0.29
CHMP1A-205ENST00000548650 ZNF645Q8N7E2 425 aa13.26□□□□□ -0.29
CHMP1A-205ENST00000548650 OSR1Q8TAX0 266 aaPredicted RBP13.26□□□□□ -0.29
CHMP1A-205ENST00000548650 USMG5Q96IX5 58 aa13.26□□□□□ -0.29
CHMP1A-205ENST00000548650 THAP7Q9BT49 309 aaPredicted RBP13.26□□□□□ -0.29
CHMP1A-205ENST00000548650 CENPOQ9BU64 300 aa13.26□□□□□ -0.29
CHMP1A-205ENST00000548650 OR9G9P0C7N8 305 aa13.25□□□□□ -0.29
CHMP1A-205ENST00000548650 ZNF45Q02386 682 aa13.25□□□□□ -0.29
CHMP1A-205ENST00000548650 UBE2UQ5VVX9 321 aa13.25□□□□□ -0.29
CHMP1A-205ENST00000548650 HACD4Q5VWC8 232 aa13.25□□□□□ -0.29
CHMP1A-205ENST00000548650 SGPP2Q8IWX5 399 aa13.25□□□□□ -0.29
CHMP1A-205ENST00000548650 NUDCD2Q8WVJ2 157 aa13.25□□□□□ -0.29
CHMP1A-205ENST00000548650 ACOT12Q8WYK0 555 aa13.25□□□□□ -0.29
CHMP1A-205ENST00000548650 CITED4Q96RK1 184 aa13.25□□□□□ -0.29
CHMP1A-205ENST00000548650 ZNF430Q9H8G1 570 aaPredicted RBP13.25□□□□□ -0.29
CHMP1A-205ENST00000548650 NOTOA8MTQ0 251 aa13.24□□□□□ -0.29
CHMP1A-205ENST00000548650 OR2A4O95047 310 aa13.24□□□□□ -0.29
CHMP1A-205ENST00000548650 IGLV2-14P01704 120 aa13.24□□□□□ -0.29
CHMP1A-205ENST00000548650 CSN3P07498 182 aa13.24□□□□□ -0.29
CHMP1A-205ENST00000548650 CDK10Q15131 360 aa13.24□□□□□ -0.29
CHMP1A-205ENST00000548650 CDNFQ49AH0 187 aa13.24□□□□□ -0.29
CHMP1A-205ENST00000548650 C10orf55Q5SWW7 151 aa13.24□□□□□ -0.29
CHMP1A-205ENST00000548650 KCTD9Q7L273 389 aa13.24□□□□□ -0.29
CHMP1A-205ENST00000548650 AKIP1Q9NQ31 210 aa13.24□□□□□ -0.29
CHMP1A-205ENST00000548650 TXNL4BQ9NX01 149 aaKnown RBP13.24□□□□□ -0.29
CHMP1A-205ENST00000548650 SIGLEC8Q9NYZ4 499 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms