RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 SYNGR2O43760 224 aa13.65□□□□□ -0.22
CHMP1A-204ENST00000547687 RAB5CP51148 216 aa13.65□□□□□ -0.22
CHMP1A-204ENST00000547687 OR2B11Q5JQS5 317 aa13.65□□□□□ -0.22
CHMP1A-204ENST00000547687 ZNF561Q8N587 486 aa13.65□□□□□ -0.22
CHMP1A-204ENST00000547687 EDARADDQ8WWZ3 215 aa13.65□□□□□ -0.22
CHMP1A-204ENST00000547687 IGFBPL1Q8WX77 278 aa13.65□□□□□ -0.22
CHMP1A-204ENST00000547687 CCL17Q92583 94 aa13.65□□□□□ -0.22
CHMP1A-204ENST00000547687 SMR3AQ99954 134 aa13.65□□□□□ -0.22
CHMP1A-204ENST00000547687 LRRC30A6NM36 301 aa13.64□□□□□ -0.23
CHMP1A-204ENST00000547687 TXNL1O43396 289 aa13.64□□□□□ -0.23
CHMP1A-204ENST00000547687 ZNF816Q0VGE8 651 aaPredicted RBP13.64□□□□□ -0.23
CHMP1A-204ENST00000547687 ZNF66Q6ZN08 573 aa13.64□□□□□ -0.23
CHMP1A-204ENST00000547687 SPAG16Q8N0X2 631 aa13.64□□□□□ -0.23
CHMP1A-204ENST00000547687 TCTEX1D1Q8N7M0 179 aa13.64□□□□□ -0.23
CHMP1A-204ENST00000547687 LYPD6BQ8NI32 183 aa13.64□□□□□ -0.23
CHMP1A-204ENST00000547687 AGMATQ9BSE5 352 aa13.64□□□□□ -0.23
CHMP1A-204ENST00000547687 GSX1Q9H4S2 264 aaPredicted RBP13.64□□□□□ -0.23
CHMP1A-204ENST00000547687 TMEM231Q9H6L2 316 aa13.64□□□□□ -0.23
CHMP1A-204ENST00000547687 GNG12Q9UBI6 72 aa13.64□□□□□ -0.23
CHMP1A-204ENST00000547687 JPT1Q9UK76 154 aa13.64□□□□□ -0.23
CHMP1A-204ENST00000547687 WSB1Q9Y6I7 421 aa13.64□□□□□ -0.23
CHMP1A-204ENST00000547687 C17orf98A8MV24 154 aa13.64□□□□□ -0.23
CHMP1A-204ENST00000547687 ATG12O94817 140 aa13.64□□□□□ -0.23
CHMP1A-204ENST00000547687 PRH1P02810 166 aa13.64□□□□□ -0.23
CHMP1A-204ENST00000547687 CAMLGP49069 296 aa13.64□□□□□ -0.23
CHMP1A-204ENST00000547687 Q3ZCU0 254 aa13.64□□□□□ -0.23
CHMP1A-204ENST00000547687 MORN2Q502X0 79 aa13.64□□□□□ -0.23
CHMP1A-204ENST00000547687 TEX36Q5VZQ5 186 aa13.64□□□□□ -0.23
CHMP1A-204ENST00000547687 STUMQ69YW2 141 aa13.64□□□□□ -0.23
CHMP1A-204ENST00000547687 ATRAIDQ6UW56 229 aa13.64□□□□□ -0.23
CHMP1A-204ENST00000547687 STX12Q86Y82 276 aa13.64□□□□□ -0.23
CHMP1A-204ENST00000547687 SDSLQ96GA7 329 aa13.64□□□□□ -0.23
CHMP1A-204ENST00000547687 HSD17B10Q99714 261 aaKnown RBP13.64□□□□□ -0.23
CHMP1A-204ENST00000547687 NCOR1P1Q9H4R4 102 aa13.64□□□□□ -0.23
CHMP1A-204ENST00000547687 OR6C3Q9NZP0 311 aa13.64□□□□□ -0.23
CHMP1A-204ENST00000547687 STRAPQ9Y3F4 350 aaKnown RBP13.64□□□□□ -0.23
CHMP1A-204ENST00000547687 H3BP45 60 aa13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 TOR1AO14656 332 aa13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 AGPAT2O15120 278 aa13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 YPEL1O60688 119 aa13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 NDUFS7O75251 213 aa13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 KRASP01116 189 aa13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 GYPAP02724 150 aa13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 IAPPP10997 89 aa13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 SELLP14151 372 aa13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 MUC1P15941 1255 aaPredicted RBP13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 ATP6V0CP27449 155 aa13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 G6PCP35575 357 aa13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 SULT1A1P50225 295 aa13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 BRWD1-AS2P59051 145 aa13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 DUX4L9Q6RFH8 374 aaPredicted RBP13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 TMEM182Q6ZP80 229 aaPredicted RBP13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 CIARTQ8N365 385 aaPredicted RBP13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 Q96MF0 132 aa13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 YPEL2Q96QA6 119 aa13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 UQCC1Q9NVA1 299 aa13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 COA4Q9NYJ1 87 aa13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 PSENENQ9NZ42 101 aa13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 FAM96BQ9Y3D0 163 aa13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 TANC2Q9HCD6 1990 aa13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 NSD1Q96L73 2696 aaPredicted RBP13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 RNASEK-C17orf49H0YIS7 233 aa13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 TMEM178BH3BS89 294 aa13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 F2RL2O00254 374 aa13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 S1PR2O95136 353 aa13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 TSPAN15O95858 294 aa13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 GPR12P47775 334 aa13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 ATP5J2P56134 94 aa13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 ZNF616Q08AN1 781 aa13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 OR2G3Q8NGZ4 309 aa13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 TSNAXQ99598 290 aaKnown RBP13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 CCL13Q99616 98 aa13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 ATP5SQ99766 215 aa13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 C19orf12Q9NSK7 152 aa13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 TMEM106BQ9NUM4 274 aa13.63□□□□□ -0.23
CHMP1A-204ENST00000547687 LINC00473A8K010 186 aa13.62□□□□□ -0.23
CHMP1A-204ENST00000547687 FAM90A26D6RGX4 464 aa13.62□□□□□ -0.23
CHMP1A-204ENST00000547687 F8W036 122 aa13.62□□□□□ -0.23
CHMP1A-204ENST00000547687 FHITP49789 147 aa13.62□□□□□ -0.23
CHMP1A-204ENST00000547687 TAGLNQ01995 201 aaKnown RBP13.62□□□□□ -0.23
CHMP1A-204ENST00000547687 TMEM267Q0VDI3 215 aaPredicted RBP13.62□□□□□ -0.23
CHMP1A-204ENST00000547687 Q71RC1 249 aaPredicted RBP13.62□□□□□ -0.23
CHMP1A-204ENST00000547687 C1orf87Q8N0U7 546 aa13.62□□□□□ -0.23
CHMP1A-204ENST00000547687 GAFA1Q96PS6 74 aa13.62□□□□□ -0.23
CHMP1A-204ENST00000547687 CALYQ9NYX4 217 aa13.62□□□□□ -0.23
CHMP1A-204ENST00000547687 TRIM77I1YAP6 450 aa13.61□□□□□ -0.23
CHMP1A-204ENST00000547687 DFFBO76075 338 aa13.61□□□□□ -0.23
CHMP1A-204ENST00000547687 P0C879 139 aa13.61□□□□□ -0.23
CHMP1A-204ENST00000547687 CGB3P0DN86 165 aa13.61□□□□□ -0.23
CHMP1A-204ENST00000547687 CGB7P0DN87 165 aa13.61□□□□□ -0.23
CHMP1A-204ENST00000547687 ADCYAP1P18509 176 aa13.61□□□□□ -0.23
CHMP1A-204ENST00000547687 LOXL3P58215 753 aa13.61□□□□□ -0.23
CHMP1A-204ENST00000547687 LINC00205P59089 165 aa13.61□□□□□ -0.23
CHMP1A-204ENST00000547687 TAS2R30P59541 319 aa13.61□□□□□ -0.23
CHMP1A-204ENST00000547687 MIDNQ504T8 468 aa13.61□□□□□ -0.23
CHMP1A-204ENST00000547687 ZNF788Q6ZQV5 615 aa13.61□□□□□ -0.23
CHMP1A-204ENST00000547687 FAM216AQ8WUB2 273 aa13.61□□□□□ -0.23
CHMP1A-204ENST00000547687 GNPNAT1Q96EK6 184 aaPredicted RBP13.61□□□□□ -0.23
CHMP1A-204ENST00000547687 ZNF665Q9H7R5 613 aa13.61□□□□□ -0.23
CHMP1A-204ENST00000547687 RFNGQ9Y644 331 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms