RNA–Protein interactions for RNA: ENST00000547392.5

CACNB3-205, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5 BASIC

Gene CACNB3, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-205ENST00000547392 ZNF709Q8N972 641 aa17.98■□□□□ 0.47
CACNB3-205ENST00000547392 RFESDQ8TAC1 157 aa17.98■□□□□ 0.47
CACNB3-205ENST00000547392 R3HDM4Q96D70 268 aa17.98■□□□□ 0.47
CACNB3-205ENST00000547392 GAR1Q9NY12 217 aaKnown RBP17.98■□□□□ 0.47
CACNB3-205ENST00000547392 JPT1Q9UK76 154 aa17.98■□□□□ 0.47
CACNB3-205ENST00000547392 C15orf62A8K5M9 175 aa17.97■□□□□ 0.47
CACNB3-205ENST00000547392 SRRM5B3KS81 715 aa17.97■□□□□ 0.47
CACNB3-205ENST00000547392 TNFSF13O75888 250 aa17.97■□□□□ 0.47
CACNB3-205ENST00000547392 DUTP33316 252 aaKnown RBP17.97■□□□□ 0.47
CACNB3-205ENST00000547392 ABHD5Q8WTS1 349 aa17.97■□□□□ 0.47
CACNB3-205ENST00000547392 PYGO2Q9BRQ0 406 aa17.97■□□□□ 0.47
CACNB3-205ENST00000547392 PROCRQ9UNN8 238 aa17.97■□□□□ 0.47
CACNB3-205ENST00000547392 SPENQ96T58 3664 aaKnown RBP17.97■□□□□ 0.47
CACNB3-205ENST00000547392 DIDO1Q9BTC0 2240 aaKnown RBP17.97■□□□□ 0.47
CACNB3-205ENST00000547392 SOX15O60248 233 aa17.96■□□□□ 0.47
CACNB3-205ENST00000547392 S100A2P29034 98 aa17.96■□□□□ 0.47
CACNB3-205ENST00000547392 BHLHA15Q7RTS1 189 aaPredicted RBP17.96■□□□□ 0.47
CACNB3-205ENST00000547392 STARD4Q96DR4 205 aa17.96■□□□□ 0.47
CACNB3-205ENST00000547392 ASCL3Q9NQ33 180 aa17.96■□□□□ 0.47
CACNB3-205ENST00000547392 YPEL1O60688 119 aa17.96■□□□□ 0.47
CACNB3-205ENST00000547392 PROP1O75360 226 aa17.96■□□□□ 0.47
CACNB3-205ENST00000547392 HPRT1P00492 218 aa17.96■□□□□ 0.47
CACNB3-205ENST00000547392 NKX6-1P78426 367 aaPredicted RBP17.96■□□□□ 0.47
CACNB3-205ENST00000547392 TMEM249Q2WGJ8 235 aa17.96■□□□□ 0.47
CACNB3-205ENST00000547392 FRZBQ92765 325 aa17.96■□□□□ 0.47
CACNB3-205ENST00000547392 RAB24Q969Q5 203 aa17.96■□□□□ 0.47
CACNB3-205ENST00000547392 SNX22Q96L94 193 aa17.96■□□□□ 0.47
CACNB3-205ENST00000547392 YPEL2Q96QA6 119 aa17.96■□□□□ 0.47
CACNB3-205ENST00000547392 SSX3Q99909 188 aa17.96■□□□□ 0.47
CACNB3-205ENST00000547392 DCTN5Q9BTE1 182 aa17.96■□□□□ 0.47
CACNB3-205ENST00000547392 DKK4Q9UBT3 224 aa17.96■□□□□ 0.47
CACNB3-205ENST00000547392 WDR83OSQ9Y284 106 aa17.96■□□□□ 0.47
CACNB3-205ENST00000547392 CACNA1DQ01668 2161 aa17.95■□□□□ 0.46
CACNB3-205ENST00000547392 CNOT1A5YKK6 2376 aaKnown RBP17.95■□□□□ 0.46
CACNB3-205ENST00000547392 DEFB108AA8MXU0 73 aa17.95■□□□□ 0.46
CACNB3-205ENST00000547392 IGHV2-70P01814 119 aa17.95■□□□□ 0.46
CACNB3-205ENST00000547392 PFN1P07737 140 aaKnown RBP17.95■□□□□ 0.46
CACNB3-205ENST00000547392 TRGC1P0CF51 173 aa17.95■□□□□ 0.46
CACNB3-205ENST00000547392 EGR1P18146 543 aa17.95■□□□□ 0.46
CACNB3-205ENST00000547392 GPR12P47775 334 aa17.95■□□□□ 0.46
CACNB3-205ENST00000547392 MORN2Q502X0 79 aa17.95■□□□□ 0.46
CACNB3-205ENST00000547392 PPP1R35Q8TAP8 253 aa17.95■□□□□ 0.46
CACNB3-205ENST00000547392 QTRT1Q9BXR0 403 aaKnown RBP17.95■□□□□ 0.46
CACNB3-205ENST00000547392 SLC25A15Q9Y619 301 aa17.95■□□□□ 0.46
CACNB3-205ENST00000547392 ZNF292O60281 2723 aa17.95■□□□□ 0.46
CACNB3-205ENST00000547392 IGKV1D-17A0A075B6S4 117 aa17.95■□□□□ 0.46
CACNB3-205ENST00000547392 MGST3O14880 152 aa17.95■□□□□ 0.46
CACNB3-205ENST00000547392 RBFOX2O43251 390 aaKnown RBP eCLIP17.95■□□□□ 0.46
CACNB3-205ENST00000547392 RBMXL2O75526 392 aaKnown RBP17.95■□□□□ 0.46
CACNB3-205ENST00000547392 OR9G9P0C7N8 305 aa17.95■□□□□ 0.46
CACNB3-205ENST00000547392 LINC00205P59089 165 aa17.95■□□□□ 0.46
CACNB3-205ENST00000547392 RPL23P62829 140 aaKnown RBP17.95■□□□□ 0.46
CACNB3-205ENST00000547392 BSXQ3C1V8 233 aa17.95■□□□□ 0.46
CACNB3-205ENST00000547392 ACOT6Q3I5F7 207 aaPredicted RBP17.95■□□□□ 0.46
CACNB3-205ENST00000547392 Q8N7P7 452 aa17.95■□□□□ 0.46
CACNB3-205ENST00000547392 OR6C3Q9NZP0 311 aa17.95■□□□□ 0.46
CACNB3-205ENST00000547392 ADIRFQ15847 76 aa17.94■□□□□ 0.46
CACNB3-205ENST00000547392 PDLIM3Q53GG5 364 aaPredicted RBP17.94■□□□□ 0.46
CACNB3-205ENST00000547392 HIST3H2BBQ8N257 126 aa17.94■□□□□ 0.46
CACNB3-205ENST00000547392 OR52E5Q8NH55 327 aa17.94■□□□□ 0.46
CACNB3-205ENST00000547392 OPN3Q9H1Y3 402 aaPredicted RBP17.94■□□□□ 0.46
CACNB3-205ENST00000547392 PPP1R2P9O14990 202 aa17.94■□□□□ 0.46
CACNB3-205ENST00000547392 WT1P19544 449 aaPredicted RBP17.94■□□□□ 0.46
CACNB3-205ENST00000547392 HNF4GQ14541 408 aa17.94■□□□□ 0.46
CACNB3-205ENST00000547392 OR2Z1Q8NG97 314 aa17.94■□□□□ 0.46
CACNB3-205ENST00000547392 PARLQ9H300 379 aa17.94■□□□□ 0.46
CACNB3-205ENST00000547392 SMCO3A2RU48 225 aa17.93■□□□□ 0.46
CACNB3-205ENST00000547392 F2RL2O00254 374 aa17.93■□□□□ 0.46
CACNB3-205ENST00000547392 HMGB3O15347 200 aaKnown RBP17.93■□□□□ 0.46
CACNB3-205ENST00000547392 PLA2G5P39877 138 aa17.93■□□□□ 0.46
CACNB3-205ENST00000547392 SPCS3P61009 180 aa17.93■□□□□ 0.46
CACNB3-205ENST00000547392 RPP30P78346 268 aaKnown RBP17.93■□□□□ 0.46
CACNB3-205ENST00000547392 EDDM3AQ14507 147 aa17.93■□□□□ 0.46
CACNB3-205ENST00000547392 C16orf82Q7Z2V1 217 aa17.93■□□□□ 0.46
CACNB3-205ENST00000547392 NCOR1P1Q9H4R4 102 aa17.93■□□□□ 0.46
CACNB3-205ENST00000547392 SRD5A3Q9H8P0 318 aa17.93■□□□□ 0.46
CACNB3-205ENST00000547392 PYY3Q5JQD4 70 aa17.92■□□□□ 0.46
CACNB3-205ENST00000547392 RPUSD4Q96CM3 377 aaKnown RBP17.92■□□□□ 0.46
CACNB3-205ENST00000547392 GAB2Q9UQC2 676 aa17.92■□□□□ 0.46
CACNB3-205ENST00000547392 DOCK11Q5JSL3 2073 aa17.92■□□□□ 0.46
CACNB3-205ENST00000547392 MBD3L4A6NDZ8 208 aaPredicted RBP17.92■□□□□ 0.46
CACNB3-205ENST00000547392 MBD3L3A6NE82 208 aaPredicted RBP17.92■□□□□ 0.46
CACNB3-205ENST00000547392 MBD3L5A6NJ08 208 aaPredicted RBP17.92■□□□□ 0.46
CACNB3-205ENST00000547392 SOD3P08294 240 aa17.92■□□□□ 0.46
CACNB3-205ENST00000547392 RPS16P62249 146 aaKnown RBP17.92■□□□□ 0.46
CACNB3-205ENST00000547392 SPINK9Q5DT21 86 aa17.92■□□□□ 0.46
CACNB3-205ENST00000547392 TGIF2LYQ8IUE0 185 aa17.92■□□□□ 0.46
CACNB3-205ENST00000547392 DEFB124Q8NES8 71 aa17.92■□□□□ 0.46
CACNB3-205ENST00000547392 OR10A7Q8NGE5 316 aa17.92■□□□□ 0.46
CACNB3-205ENST00000547392 OR4F5Q8NH21 305 aa17.92■□□□□ 0.46
CACNB3-205ENST00000547392 MBD3L2Q8NHZ7 208 aaPredicted RBP17.92■□□□□ 0.46
CACNB3-205ENST00000547392 RAB1CQ92928 201 aa17.92■□□□□ 0.46
CACNB3-205ENST00000547392 NEIL1Q96FI4 390 aaPredicted RBP17.92■□□□□ 0.46
CACNB3-205ENST00000547392 OR4F4Q96R69 305 aa17.92■□□□□ 0.46
CACNB3-205ENST00000547392 GNG12Q9UBI6 72 aa17.92■□□□□ 0.46
CACNB3-205ENST00000547392 DMRT1Q9Y5R6 373 aa17.92■□□□□ 0.46
CACNB3-205ENST00000547392 ZFHX2Q9C0A1 2572 aaPredicted RBP17.92■□□□□ 0.46
CACNB3-205ENST00000547392 ITGB1BP1O14713 200 aa17.91■□□□□ 0.46
CACNB3-205ENST00000547392 FCGR3BO75015 233 aa17.91■□□□□ 0.46
CACNB3-205ENST00000547392 MPDU1O75352 247 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 353.1 ms