RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 PLSCR3Q9NRY6 295 aa18.47■□□□□ 0.55
SMARCD1-203ENST00000547247 CENPXA8MT69 81 aa18.47■□□□□ 0.55
SMARCD1-203ENST00000547247 RLN1P04808 185 aa18.47■□□□□ 0.55
SMARCD1-203ENST00000547247 F2RL1P55085 397 aa18.47■□□□□ 0.55
SMARCD1-203ENST00000547247 OR2B11Q5JQS5 317 aa18.47■□□□□ 0.55
SMARCD1-203ENST00000547247 OR51H1Q8NH63 302 aa18.47■□□□□ 0.55
SMARCD1-203ENST00000547247 SLC2A9Q9NRM0 540 aa18.47■□□□□ 0.55
SMARCD1-203ENST00000547247 CRYZL1O95825 349 aa18.46■□□□□ 0.55
SMARCD1-203ENST00000547247 PI3P19957 117 aa18.46■□□□□ 0.55
SMARCD1-203ENST00000547247 KIR2DS2P43631 304 aa18.46■□□□□ 0.55
SMARCD1-203ENST00000547247 TMEM177Q53S58 311 aa18.46■□□□□ 0.55
SMARCD1-203ENST00000547247 POC5Q8NA72 575 aa18.46■□□□□ 0.55
SMARCD1-203ENST00000547247 SCGB3A2Q96PL1 93 aa18.46■□□□□ 0.55
SMARCD1-203ENST00000547247 RANBP3Q9H6Z4 567 aaPredicted RBP18.46■□□□□ 0.55
SMARCD1-203ENST00000547247 GPR132Q9UNW8 380 aa18.46■□□□□ 0.55
SMARCD1-203ENST00000547247 NBR2O15453 112 aa18.45■□□□□ 0.54
SMARCD1-203ENST00000547247 PEX14O75381 377 aa18.45■□□□□ 0.54
SMARCD1-203ENST00000547247 CTSDP07339 412 aaPredicted RBP18.45■□□□□ 0.54
SMARCD1-203ENST00000547247 HKR1P10072 659 aa18.45■□□□□ 0.54
SMARCD1-203ENST00000547247 CNTFRP26992 372 aa18.45■□□□□ 0.54
SMARCD1-203ENST00000547247 RND3P61587 244 aa18.45■□□□□ 0.54
SMARCD1-203ENST00000547247 RELBQ01201 579 aa18.45■□□□□ 0.54
SMARCD1-203ENST00000547247 C11orf88Q6PI97 169 aa18.45■□□□□ 0.54
SMARCD1-203ENST00000547247 SPAG16Q8N0X2 631 aa18.45■□□□□ 0.54
SMARCD1-203ENST00000547247 C5orf56Q8N8D9 126 aa18.45■□□□□ 0.54
SMARCD1-203ENST00000547247 TAF15Q92804 592 aaKnown RBP eCLIP18.45■□□□□ 0.54
SMARCD1-203ENST00000547247 TSNAXQ99598 290 aaKnown RBP18.45■□□□□ 0.54
SMARCD1-203ENST00000547247 KIAA1456Q9P272 454 aa18.45■□□□□ 0.54
SMARCD1-203ENST00000547247 C14orf166Q9Y224 244 aaKnown RBP18.45■□□□□ 0.54
SMARCD1-203ENST00000547247 SHOXO15266 292 aa18.44■□□□□ 0.54
SMARCD1-203ENST00000547247 UPK1BO75841 260 aa18.44■□□□□ 0.54
SMARCD1-203ENST00000547247 TSPAN9O75954 239 aa18.44■□□□□ 0.54
SMARCD1-203ENST00000547247 AMY1AP04745 511 aa18.44■□□□□ 0.54
SMARCD1-203ENST00000547247 LGALS7P47929 136 aa18.44■□□□□ 0.54
SMARCD1-203ENST00000547247 PIGPP57054 158 aa18.44■□□□□ 0.54
SMARCD1-203ENST00000547247 BRWD1-AS2P59051 145 aa18.44■□□□□ 0.54
SMARCD1-203ENST00000547247 BLCAPP62952 87 aa18.44■□□□□ 0.54
SMARCD1-203ENST00000547247 Q6ZSV7 163 aa18.44■□□□□ 0.54
SMARCD1-203ENST00000547247 TBC1D26Q86UD7 250 aa18.44■□□□□ 0.54
SMARCD1-203ENST00000547247 Q8N9W7 124 aa18.44■□□□□ 0.54
SMARCD1-203ENST00000547247 NPBQ8NG41 125 aa18.44■□□□□ 0.54
SMARCD1-203ENST00000547247 OR4S2Q8NH73 311 aa18.44■□□□□ 0.54
SMARCD1-203ENST00000547247 OSR1Q8TAX0 266 aaPredicted RBP18.44■□□□□ 0.54
SMARCD1-203ENST00000547247 CD300LFQ8TDQ1 290 aa18.44■□□□□ 0.54
SMARCD1-203ENST00000547247 HARBI1Q96MB7 349 aa18.44■□□□□ 0.54
SMARCD1-203ENST00000547247 PRSS22Q9GZN4 317 aa18.44■□□□□ 0.54
SMARCD1-203ENST00000547247 LIN7CQ9NUP9 197 aaKnown RBP18.44■□□□□ 0.54
SMARCD1-203ENST00000547247 COPZ2Q9P299 210 aa18.44■□□□□ 0.54
SMARCD1-203ENST00000547247 PLA2G10O15496 165 aa18.43■□□□□ 0.54
SMARCD1-203ENST00000547247 NDUFA7O95182 113 aa18.43■□□□□ 0.54
SMARCD1-203ENST00000547247 F2RP25116 425 aa18.43■□□□□ 0.54
SMARCD1-203ENST00000547247 FAM71E2Q8N5Q1 922 aa18.43■□□□□ 0.54
SMARCD1-203ENST00000547247 CCDC71LQ8N9Z2 235 aa18.43■□□□□ 0.54
SMARCD1-203ENST00000547247 SLC25A21Q9BQT8 299 aaPredicted RBP18.43■□□□□ 0.54
SMARCD1-203ENST00000547247 MPPED1O15442 326 aa18.42■□□□□ 0.54
SMARCD1-203ENST00000547247 RBFOX2O43251 390 aaKnown RBP eCLIP18.42■□□□□ 0.54
SMARCD1-203ENST00000547247 NDUFA3O95167 84 aa18.42■□□□□ 0.54
SMARCD1-203ENST00000547247 RAG2P55895 527 aa18.42■□□□□ 0.54
SMARCD1-203ENST00000547247 TCTEX1D1Q8N7M0 179 aa18.42■□□□□ 0.54
SMARCD1-203ENST00000547247 RASL11BQ9BPW5 248 aa18.42■□□□□ 0.54
SMARCD1-203ENST00000547247 RTBDNQ9BSG5 229 aaPredicted RBP18.42■□□□□ 0.54
SMARCD1-203ENST00000547247 C19orf24Q9BVV8 132 aa18.42■□□□□ 0.54
SMARCD1-203ENST00000547247 C5orf66Q9H5L9 145 aa18.42■□□□□ 0.54
SMARCD1-203ENST00000547247 RRHO14718 337 aa18.42■□□□□ 0.54
SMARCD1-203ENST00000547247 LYRM1O43325 122 aa18.42■□□□□ 0.54
SMARCD1-203ENST00000547247 SPDEFO95238 335 aa18.42■□□□□ 0.54
SMARCD1-203ENST00000547247 OR4F5Q8NH21 305 aa18.42■□□□□ 0.54
SMARCD1-203ENST00000547247 VSIG4Q9Y279 399 aa18.42■□□□□ 0.54
SMARCD1-203ENST00000547247 RAMP3O60896 148 aa18.41■□□□□ 0.54
SMARCD1-203ENST00000547247 CCR6P51684 374 aa18.41■□□□□ 0.54
SMARCD1-203ENST00000547247 PSG5Q15238 335 aa18.41■□□□□ 0.54
SMARCD1-203ENST00000547247 RBMS2Q15434 407 aaKnown RBP18.41■□□□□ 0.54
SMARCD1-203ENST00000547247 C5orf64Q2M2E5 130 aa18.41■□□□□ 0.54
SMARCD1-203ENST00000547247 ZNF702PQ9H963 129 aa18.41■□□□□ 0.54
SMARCD1-203ENST00000547247 SH2D7A6NKC9 451 aaPredicted RBP18.4■□□□□ 0.54
SMARCD1-203ENST00000547247 SRRM4A7MD48 611 aaKnown RBP18.4■□□□□ 0.54
SMARCD1-203ENST00000547247 PLGLAQ15195 96 aa18.4■□□□□ 0.54
SMARCD1-203ENST00000547247 C9orf152Q5JTZ5 239 aa18.4■□□□□ 0.54
SMARCD1-203ENST00000547247 Q6ZS46 218 aa18.4■□□□□ 0.54
SMARCD1-203ENST00000547247 FBXL15Q9H469 300 aa18.4■□□□□ 0.54
SMARCD1-203ENST00000547247 C16orf95Q9H693 158 aa18.4■□□□□ 0.54
SMARCD1-203ENST00000547247 METTL1Q9UBP6 276 aaKnown RBP18.4■□□□□ 0.54
SMARCD1-203ENST00000547247 SLC25A17O43808 307 aa18.39■□□□□ 0.53
SMARCD1-203ENST00000547247 HPRT1P00492 218 aa18.39■□□□□ 0.53
SMARCD1-203ENST00000547247 IGLV2-23P01705 113 aa18.39■□□□□ 0.53
SMARCD1-203ENST00000547247 BTCP35070 178 aa18.39■□□□□ 0.53
SMARCD1-203ENST00000547247 FOXL1Q12952 345 aa18.39■□□□□ 0.53
SMARCD1-203ENST00000547247 Q8N2B8 174 aa18.39■□□□□ 0.53
SMARCD1-203ENST00000547247 OR2T6Q8NHC8 308 aa18.39■□□□□ 0.53
SMARCD1-203ENST00000547247 TSC22D3Q99576 134 aa18.39■□□□□ 0.53
SMARCD1-203ENST00000547247 PLEKHA2Q9HB19 425 aa18.39■□□□□ 0.53
SMARCD1-203ENST00000547247 FAM212BQ9NTI7 297 aaPredicted RBP18.39■□□□□ 0.53
SMARCD1-203ENST00000547247 COL6A5A8TX70 2615 aa18.39■□□□□ 0.53
SMARCD1-203ENST00000547247 TMEM89A2RUT3 159 aa18.38■□□□□ 0.53
SMARCD1-203ENST00000547247 HRASP01112 189 aa18.38■□□□□ 0.53
SMARCD1-203ENST00000547247 VMA21Q3ZAQ7 101 aa18.38■□□□□ 0.53
SMARCD1-203ENST00000547247 ARSJQ5FYB0 599 aaPredicted RBP18.38■□□□□ 0.53
SMARCD1-203ENST00000547247 LIN54Q6MZP7 749 aa18.38■□□□□ 0.53
SMARCD1-203ENST00000547247 AIFM2Q9BRQ8 373 aa18.38■□□□□ 0.53
SMARCD1-203ENST00000547247 C3orf85A0A1B0GTC6 90 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms