RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 ST3GAL6Q9Y274 331 aa11.43□□□□□ -0.58
CLSTN3-216ENST00000545663 SMIM31A0A1B0GVY4 71 aa11.42□□□□□ -0.58
CLSTN3-216ENST00000545663 CRTAPO75718 401 aaPredicted RBP11.42□□□□□ -0.58
CLSTN3-216ENST00000545663 CDK2AP2O75956 126 aa11.42□□□□□ -0.58
CLSTN3-216ENST00000545663 NDUFA3O95167 84 aa11.42□□□□□ -0.58
CLSTN3-216ENST00000545663 GLAP06280 429 aa11.42□□□□□ -0.58
CLSTN3-216ENST00000545663 MGMTP16455 207 aa11.42□□□□□ -0.58
CLSTN3-216ENST00000545663 RAB6AP20340 208 aa11.42□□□□□ -0.58
CLSTN3-216ENST00000545663 CD40LGP29965 261 aa11.42□□□□□ -0.58
CLSTN3-216ENST00000545663 SERPINB10P48595 397 aa11.42□□□□□ -0.58
CLSTN3-216ENST00000545663 RBM11P57052 281 aaKnown RBP11.42□□□□□ -0.58
CLSTN3-216ENST00000545663 CTF1Q16619 201 aa11.42□□□□□ -0.58
CLSTN3-216ENST00000545663 SFXN4Q6P4A7 337 aa11.42□□□□□ -0.58
CLSTN3-216ENST00000545663 Q6ZWC4 215 aa11.42□□□□□ -0.58
CLSTN3-216ENST00000545663 OR5T1Q8NG75 326 aa11.42□□□□□ -0.58
CLSTN3-216ENST00000545663 OR10V1Q8NGI7 309 aa11.42□□□□□ -0.58
CLSTN3-216ENST00000545663 AP3S1Q92572 193 aa11.42□□□□□ -0.58
CLSTN3-216ENST00000545663 CLCC1Q96S66 551 aa11.42□□□□□ -0.58
CLSTN3-216ENST00000545663 TMEM59Q9BXS4 323 aa11.42□□□□□ -0.58
CLSTN3-216ENST00000545663 SCRT2Q9NQ03 307 aa11.42□□□□□ -0.58
CLSTN3-216ENST00000545663 ABRACLQ9P1F3 81 aa11.42□□□□□ -0.58
CLSTN3-216ENST00000545663 PEF1Q9UBV8 284 aaKnown RBP11.42□□□□□ -0.58
CLSTN3-216ENST00000545663 RAB22AQ9UL26 194 aa11.42□□□□□ -0.58
CLSTN3-216ENST00000545663 ETV7Q9Y603 341 aa11.42□□□□□ -0.58
CLSTN3-216ENST00000545663 METTL21EPA6NDL7 271 aa11.41□□□□□ -0.58
CLSTN3-216ENST00000545663 IGLL5B9A064 214 aa11.41□□□□□ -0.58
CLSTN3-216ENST00000545663 LANCL1O43813 399 aa11.41□□□□□ -0.58
CLSTN3-216ENST00000545663 OR2A4O95047 310 aa11.41□□□□□ -0.58
CLSTN3-216ENST00000545663 IFNA4P05014 189 aa11.41□□□□□ -0.58
CLSTN3-216ENST00000545663 GZMHP20718 246 aa11.41□□□□□ -0.58
CLSTN3-216ENST00000545663 RORCP51449 518 aa11.41□□□□□ -0.58
CLSTN3-216ENST00000545663 LSM3P62310 102 aaKnown RBP11.41□□□□□ -0.58
CLSTN3-216ENST00000545663 ARL6IP1Q15041 203 aa11.41□□□□□ -0.58
CLSTN3-216ENST00000545663 RPEL1Q2QD12 228 aa11.41□□□□□ -0.58
CLSTN3-216ENST00000545663 ACOT12Q8WYK0 555 aa11.41□□□□□ -0.58
CLSTN3-216ENST00000545663 SLC25A46Q96AG3 418 aa11.41□□□□□ -0.58
CLSTN3-216ENST00000545663 MBNL3Q9NUK0 354 aaKnown RBP11.41□□□□□ -0.58
CLSTN3-216ENST00000545663 RNF150Q9ULK6 438 aa11.41□□□□□ -0.58
CLSTN3-216ENST00000545663 TMEM14DPA8MWL7 114 aa11.4□□□□□ -0.58
CLSTN3-216ENST00000545663 CA11O75493 328 aa11.4□□□□□ -0.58
CLSTN3-216ENST00000545663 OR7C1O76099 320 aaPredicted RBP11.4□□□□□ -0.58
CLSTN3-216ENST00000545663 KIR2DS2P43631 304 aa11.4□□□□□ -0.58
CLSTN3-216ENST00000545663 OR10A3P58181 314 aa11.4□□□□□ -0.58
CLSTN3-216ENST00000545663 VBP1P61758 197 aa11.4□□□□□ -0.58
CLSTN3-216ENST00000545663 NCS1P62166 190 aa11.4□□□□□ -0.58
CLSTN3-216ENST00000545663 MXD1Q05195 221 aa11.4□□□□□ -0.58
CLSTN3-216ENST00000545663 RBMS2Q15434 407 aaKnown RBP11.4□□□□□ -0.58
CLSTN3-216ENST00000545663 C2orf76Q3KRA6 126 aa11.4□□□□□ -0.58
CLSTN3-216ENST00000545663 SLC16A13Q7RTY0 426 aa11.4□□□□□ -0.58
CLSTN3-216ENST00000545663 OR10K1Q8NGX5 313 aa11.4□□□□□ -0.58
CLSTN3-216ENST00000545663 DYNLRB2Q8TF09 96 aa11.4□□□□□ -0.58
CLSTN3-216ENST00000545663 GFI1Q99684 422 aa11.4□□□□□ -0.58
CLSTN3-216ENST00000545663 TM2D1Q9BX74 207 aa11.4□□□□□ -0.58
CLSTN3-216ENST00000545663 SELENOIQ9C0D9 397 aa11.4□□□□□ -0.58
CLSTN3-216ENST00000545663 DCSTAMPQ9H295 470 aa11.4□□□□□ -0.58
CLSTN3-216ENST00000545663 ZC4H2Q9NQZ6 224 aa11.4□□□□□ -0.58
CLSTN3-216ENST00000545663 DAPK2Q9UIK4 370 aa11.4□□□□□ -0.58
CLSTN3-216ENST00000545663 DNAH5Q8TE73 4624 aa11.39□□□□□ -0.59
CLSTN3-216ENST00000545663 CCDC160A6NGH7 325 aa11.39□□□□□ -0.59
CLSTN3-216ENST00000545663 FUT3P21217 361 aa11.39□□□□□ -0.59
CLSTN3-216ENST00000545663 RPS19P39019 145 aaKnown RBP11.39□□□□□ -0.59
CLSTN3-216ENST00000545663 RPS27AP62979 156 aaKnown RBP11.39□□□□□ -0.59
CLSTN3-216ENST00000545663 PAX5Q02548 391 aa11.39□□□□□ -0.59
CLSTN3-216ENST00000545663 P2RY14Q15391 338 aa11.39□□□□□ -0.59
CLSTN3-216ENST00000545663 RBMY1FQ15415 496 aaKnown RBP11.39□□□□□ -0.59
CLSTN3-216ENST00000545663 MOGAT2Q3SYC2 334 aa11.39□□□□□ -0.59
CLSTN3-216ENST00000545663 HES5Q5TA89 166 aa11.39□□□□□ -0.59
CLSTN3-216ENST00000545663 RAB12Q6IQ22 244 aa11.39□□□□□ -0.59
CLSTN3-216ENST00000545663 ZNF343Q6P1L6 599 aa11.39□□□□□ -0.59
CLSTN3-216ENST00000545663 POC5Q8NA72 575 aa11.39□□□□□ -0.59
CLSTN3-216ENST00000545663 OR56B1Q8NGI3 324 aa11.39□□□□□ -0.59
CLSTN3-216ENST00000545663 Q96M66 194 aa11.39□□□□□ -0.59
CLSTN3-216ENST00000545663 CMTM3Q96MX0 182 aa11.39□□□□□ -0.59
CLSTN3-216ENST00000545663 NEDD4LQ96PU5 975 aa11.39□□□□□ -0.59
CLSTN3-216ENST00000545663 PEMTQ9UBM1 199 aa11.39□□□□□ -0.59
CLSTN3-216ENST00000545663 MYCBP2O75592 4640 aa11.39□□□□□ -0.59
CLSTN3-216ENST00000545663 A0A0A6YYH2 397 aa11.38□□□□□ -0.59
CLSTN3-216ENST00000545663 A0A0G2JLM5 398 aa11.38□□□□□ -0.59
CLSTN3-216ENST00000545663 A6NJ64 397 aa11.38□□□□□ -0.59
CLSTN3-216ENST00000545663 MCRIP1C9JLW8 97 aa11.38□□□□□ -0.59
CLSTN3-216ENST00000545663 RRHO14718 337 aa11.38□□□□□ -0.59
CLSTN3-216ENST00000545663 RBMXL2O75526 392 aaKnown RBP11.38□□□□□ -0.59
CLSTN3-216ENST00000545663 TCTAP57738 103 aa11.38□□□□□ -0.59
CLSTN3-216ENST00000545663 QRFPP83859 136 aa11.38□□□□□ -0.59
CLSTN3-216ENST00000545663 PLGLAQ15195 96 aa11.38□□□□□ -0.59
CLSTN3-216ENST00000545663 PIGYQ3MUY2 71 aa11.38□□□□□ -0.59
CLSTN3-216ENST00000545663 IDNKQ5T6J7 187 aa11.38□□□□□ -0.59
CLSTN3-216ENST00000545663 MZT2AQ6P582 158 aa11.38□□□□□ -0.59
CLSTN3-216ENST00000545663 SUMF2Q8NBJ7 301 aa11.38□□□□□ -0.59
CLSTN3-216ENST00000545663 C11orf45Q8TAV5 145 aa11.38□□□□□ -0.59
CLSTN3-216ENST00000545663 DPCDQ9BVM2 203 aaPredicted RBP11.38□□□□□ -0.59
CLSTN3-216ENST00000545663 RNF167Q9H6Y7 350 aa11.38□□□□□ -0.59
CLSTN3-216ENST00000545663 RSL24D1Q9UHA3 163 aaKnown RBP11.38□□□□□ -0.59
CLSTN3-216ENST00000545663 GEMIN2O14893 280 aaKnown RBP11.37□□□□□ -0.59
CLSTN3-216ENST00000545663 PDCD6O75340 191 aa11.37□□□□□ -0.59
CLSTN3-216ENST00000545663 FOLR2P14207 255 aa11.37□□□□□ -0.59
CLSTN3-216ENST00000545663 ZNF182P17025 639 aaPredicted RBP11.37□□□□□ -0.59
CLSTN3-216ENST00000545663 OR3A3P47888 321 aa11.37□□□□□ -0.59
CLSTN3-216ENST00000545663 ATAD3CQ5T2N8 411 aa11.37□□□□□ -0.59
CLSTN3-216ENST00000545663 NR2C2APQ86WQ0 139 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms