RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 PTX4Q96A99 478 aa9.72□□□□□ -0.85
USP28-212ENST00000544750 Q9N2K0 584 aa9.72□□□□□ -0.85
USP28-212ENST00000544750 KCNIP1Q9NZI2 227 aa9.72□□□□□ -0.85
USP28-212ENST00000544750 ADAM30Q9UKF2 790 aa9.72□□□□□ -0.85
USP28-212ENST00000544750 KIAA1109Q2LD37 5005 aa9.72□□□□□ -0.85
USP28-212ENST00000544750 OR5H14A6NHG9 310 aa9.71□□□□□ -0.86
USP28-212ENST00000544750 RANBP1P43487 201 aa9.71□□□□□ -0.86
USP28-212ENST00000544750 HLA-DRB3P79483 266 aa9.71□□□□□ -0.86
USP28-212ENST00000544750 SSBP2P81877 361 aaPredicted RBP9.71□□□□□ -0.86
USP28-212ENST00000544750 MXD1Q05195 221 aa9.71□□□□□ -0.86
USP28-212ENST00000544750 LCN12Q6JVE5 192 aa9.71□□□□□ -0.86
USP28-212ENST00000544750 OR10R2Q8NGX6 335 aa9.71□□□□□ -0.86
USP28-212ENST00000544750 ABHD5Q8WTS1 349 aa9.71□□□□□ -0.86
USP28-212ENST00000544750 GALMQ96C23 342 aa9.71□□□□□ -0.86
USP28-212ENST00000544750 RAB3CQ96E17 227 aa9.71□□□□□ -0.86
USP28-212ENST00000544750 PARP12Q9H0J9 701 aaKnown RBP9.71□□□□□ -0.86
USP28-212ENST00000544750 RIMS4Q9H426 269 aaPredicted RBP9.71□□□□□ -0.86
USP28-212ENST00000544750 CHMP1AQ9HD42 196 aaPredicted RBP9.71□□□□□ -0.86
USP28-212ENST00000544750 C12orf4Q9NQ89 552 aa9.71□□□□□ -0.86
USP28-212ENST00000544750 DAPK2Q9UIK4 370 aa9.71□□□□□ -0.86
USP28-212ENST00000544750 IGKV1-6A0A0C4DH72 117 aa9.7□□□□□ -0.86
USP28-212ENST00000544750 H0YJW9 148 aa9.7□□□□□ -0.86
USP28-212ENST00000544750 H3BUA1 57 aa9.7□□□□□ -0.86
USP28-212ENST00000544750 RBBP9O75884 186 aa9.7□□□□□ -0.86
USP28-212ENST00000544750 BRI3O95415 125 aa9.7□□□□□ -0.86
USP28-212ENST00000544750 HIST1H1DP16402 221 aaKnown RBP9.7□□□□□ -0.86
USP28-212ENST00000544750 GNB3P16520 340 aa9.7□□□□□ -0.86
USP28-212ENST00000544750 SYNJ2BPP57105 145 aa9.7□□□□□ -0.86
USP28-212ENST00000544750 PLGLAQ15195 96 aa9.7□□□□□ -0.86
USP28-212ENST00000544750 GLDNQ6ZMI3 551 aaPredicted RBP9.7□□□□□ -0.86
USP28-212ENST00000544750 POC5Q8NA72 575 aa9.7□□□□□ -0.86
USP28-212ENST00000544750 OR5AN1Q8NGI8 311 aa9.7□□□□□ -0.86
USP28-212ENST00000544750 SETD6Q8TBK2 473 aa9.7□□□□□ -0.86
USP28-212ENST00000544750 LGALS14Q8TCE9 139 aa9.7□□□□□ -0.86
USP28-212ENST00000544750 RNF5Q99942 180 aa9.7□□□□□ -0.86
USP28-212ENST00000544750 CMSS1Q9BQ75 279 aaKnown RBP9.7□□□□□ -0.86
USP28-212ENST00000544750 PLEKHA3Q9HB20 300 aa9.7□□□□□ -0.86
USP28-212ENST00000544750 OR1A1Q9P1Q5 309 aa9.7□□□□□ -0.86
USP28-212ENST00000544750 ELF5Q9UKW6 265 aaPredicted RBP9.7□□□□□ -0.86
USP28-212ENST00000544750 DNAH6Q9C0G6 4158 aa9.69□□□□□ -0.86
USP28-212ENST00000544750 VPS13DQ5THJ4 4388 aa9.69□□□□□ -0.86
USP28-212ENST00000544750 ANKRD34BA5PLL1 514 aa9.69□□□□□ -0.86
USP28-212ENST00000544750 ST8SIA5O15466 376 aa9.69□□□□□ -0.86
USP28-212ENST00000544750 CA2P00918 260 aa9.69□□□□□ -0.86
USP28-212ENST00000544750 FCGR3AP08637 254 aa9.69□□□□□ -0.86
USP28-212ENST00000544750 SCTP09683 121 aa9.69□□□□□ -0.86
USP28-212ENST00000544750 CD40LGP29965 261 aa9.69□□□□□ -0.86
USP28-212ENST00000544750 PSG5Q15238 335 aa9.69□□□□□ -0.86
USP28-212ENST00000544750 RPL39P5Q59GN2 51 aa9.69□□□□□ -0.86
USP28-212ENST00000544750 OR2AK2Q8NG84 335 aa9.69□□□□□ -0.86
USP28-212ENST00000544750 OR2K2Q8NGT1 345 aa9.69□□□□□ -0.86
USP28-212ENST00000544750 OR5H6Q8NGV6 325 aa9.69□□□□□ -0.86
USP28-212ENST00000544750 IL1F10Q8WWZ1 152 aa9.69□□□□□ -0.86
USP28-212ENST00000544750 SLC25A38Q96DW6 304 aa9.69□□□□□ -0.86
USP28-212ENST00000544750 CLCC1Q96S66 551 aa9.69□□□□□ -0.86
USP28-212ENST00000544750 AGMATQ9BSE5 352 aa9.69□□□□□ -0.86
USP28-212ENST00000544750 PIPOXQ9P0Z9 390 aa9.69□□□□□ -0.86
USP28-212ENST00000544750 ABRACLQ9P1F3 81 aa9.69□□□□□ -0.86
USP28-212ENST00000544750 A0A075B6Q4 140 aa9.68□□□□□ -0.86
USP28-212ENST00000544750 A0A0G2JLM5 398 aa9.68□□□□□ -0.86
USP28-212ENST00000544750 C13orf42A0A1B0GVH6 325 aa9.68□□□□□ -0.86
USP28-212ENST00000544750 ZNF785A8K8V0 405 aa9.68□□□□□ -0.86
USP28-212ENST00000544750 SLC25A17O43808 307 aa9.68□□□□□ -0.86
USP28-212ENST00000544750 AIREO43918 545 aa9.68□□□□□ -0.86
USP28-212ENST00000544750 PROP1O75360 226 aa9.68□□□□□ -0.86
USP28-212ENST00000544750 LY6G6CO95867 125 aa9.68□□□□□ -0.86
USP28-212ENST00000544750 TRBV12-3P01733 135 aa9.68□□□□□ -0.86
USP28-212ENST00000544750 MC5RP33032 325 aa9.68□□□□□ -0.86
USP28-212ENST00000544750 CD81P60033 236 aa9.68□□□□□ -0.86
USP28-212ENST00000544750 TIMM50Q3ZCQ8 353 aa9.68□□□□□ -0.86
USP28-212ENST00000544750 ZNF343Q6P1L6 599 aa9.68□□□□□ -0.86
USP28-212ENST00000544750 LAX1Q8IWV1 398 aa9.68□□□□□ -0.86
USP28-212ENST00000544750 OR13F1Q8NGS4 319 aa9.68□□□□□ -0.86
USP28-212ENST00000544750 NEURL2Q9BR09 285 aa9.68□□□□□ -0.86
USP28-212ENST00000544750 ATG5Q9H1Y0 275 aa9.68□□□□□ -0.86
USP28-212ENST00000544750 VCX3AQ9NNX9 186 aa9.68□□□□□ -0.86
USP28-212ENST00000544750 METTL1Q9UBP6 276 aaKnown RBP9.68□□□□□ -0.86
USP28-212ENST00000544750 MGAT4AQ9UM21 535 aa9.68□□□□□ -0.86
USP28-212ENST00000544750 WASHC3Q9Y3C0 194 aa9.68□□□□□ -0.86
USP28-212ENST00000544750 METTL21EPA6NDL7 271 aa9.67□□□□□ -0.86
USP28-212ENST00000544750 TRDCB7Z8K6 153 aa9.67□□□□□ -0.86
USP28-212ENST00000544750 ITGB1BP1O14713 200 aa9.67□□□□□ -0.86
USP28-212ENST00000544750 RAB29O14966 203 aa9.67□□□□□ -0.86
USP28-212ENST00000544750 RBMXL2O75526 392 aaKnown RBP9.67□□□□□ -0.86
USP28-212ENST00000544750 SPDEFO95238 335 aa9.67□□□□□ -0.86
USP28-212ENST00000544750 GSTP1P09211 210 aaKnown RBP9.67□□□□□ -0.86
USP28-212ENST00000544750 CD7P09564 240 aa9.67□□□□□ -0.86
USP28-212ENST00000544750 CD3GP09693 182 aa9.67□□□□□ -0.86
USP28-212ENST00000544750 RPS19P39019 145 aaKnown RBP9.67□□□□□ -0.86
USP28-212ENST00000544750 SCAND1P57086 179 aa9.67□□□□□ -0.86
USP28-212ENST00000544750 LSM3P62310 102 aaKnown RBP9.67□□□□□ -0.86
USP28-212ENST00000544750 DYRK1AQ13627 763 aa9.67□□□□□ -0.86
USP28-212ENST00000544750 FXYD3Q14802 87 aa9.67□□□□□ -0.86
USP28-212ENST00000544750 DEFB125Q8N687 156 aa9.67□□□□□ -0.86
USP28-212ENST00000544750 OR5T1Q8NG75 326 aa9.67□□□□□ -0.86
USP28-212ENST00000544750 MAFIPQ8WZ33 124 aa9.67□□□□□ -0.86
USP28-212ENST00000544750 CABLES2Q9BTV7 478 aa9.67□□□□□ -0.86
USP28-212ENST00000544750 FUNDC2Q9BWH2 189 aa9.67□□□□□ -0.86
USP28-212ENST00000544750 WFDC10AQ9H1F0 79 aa9.67□□□□□ -0.86
USP28-212ENST00000544750 RHBDL2Q9NX52 303 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms