RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 DHRS2Q13268 280 aa5.33□□□□□ -1.56
CDCA3-209ENST00000544610 ABCA11PQ4W5N1 156 aa5.33□□□□□ -1.56
CDCA3-209ENST00000544610 GPR157Q5UAW9 335 aa5.33□□□□□ -1.56
CDCA3-209ENST00000544610 DHRS7BQ6IAN0 325 aaPredicted RBP5.33□□□□□ -1.56
CDCA3-209ENST00000544610 FAAP20Q6NZ36 180 aa5.33□□□□□ -1.56
CDCA3-209ENST00000544610 Q6YL49 198 aa5.33□□□□□ -1.56
CDCA3-209ENST00000544610 LYG2Q86SG7 212 aa5.33□□□□□ -1.56
CDCA3-209ENST00000544610 OR2C3Q8N628 320 aa5.33□□□□□ -1.56
CDCA3-209ENST00000544610 ZNF439Q8NDP4 499 aa5.33□□□□□ -1.56
CDCA3-209ENST00000544610 OR11H6Q8NGC7 330 aa5.33□□□□□ -1.56
CDCA3-209ENST00000544610 OR13D1Q8NGV5 346 aa5.33□□□□□ -1.56
CDCA3-209ENST00000544610 OR1L1Q8NH94 360 aa5.33□□□□□ -1.56
CDCA3-209ENST00000544610 COQ8AQ8NI60 647 aa5.33□□□□□ -1.56
CDCA3-209ENST00000544610 MARCH1Q8TCQ1 289 aa5.33□□□□□ -1.56
CDCA3-209ENST00000544610 RTN4IP1Q8WWV3 396 aaPredicted RBP5.33□□□□□ -1.56
CDCA3-209ENST00000544610 MAFIPQ8WZ33 124 aa5.33□□□□□ -1.56
CDCA3-209ENST00000544610 H1FXQ92522 213 aaKnown RBP5.33□□□□□ -1.56
CDCA3-209ENST00000544610 PHB2Q99623 299 aa5.33□□□□□ -1.56
CDCA3-209ENST00000544610 AIFM2Q9BRQ8 373 aa5.33□□□□□ -1.56
CDCA3-209ENST00000544610 PCGF1Q9BSM1 259 aa5.33□□□□□ -1.56
CDCA3-209ENST00000544610 ABHD14AQ9BUJ0 271 aa5.33□□□□□ -1.56
CDCA3-209ENST00000544610 CHIAQ9BZP6 476 aa5.33□□□□□ -1.56
CDCA3-209ENST00000544610 SLC5A7Q9GZV3 580 aa5.33□□□□□ -1.56
CDCA3-209ENST00000544610 TMEM133Q9H2Q1 129 aa5.33□□□□□ -1.56
CDCA3-209ENST00000544610 LIN7CQ9NUP9 197 aaKnown RBP5.33□□□□□ -1.56
CDCA3-209ENST00000544610 ZNF221Q9UK13 617 aa5.33□□□□□ -1.56
CDCA3-209ENST00000544610 VSIG4Q9Y279 399 aa5.33□□□□□ -1.56
CDCA3-209ENST00000544610 AMMECR1Q9Y4X0 333 aaPredicted RBP5.33□□□□□ -1.56
CDCA3-209ENST00000544610 POMT1Q9Y6A1 747 aa5.33□□□□□ -1.56
CDCA3-209ENST00000544610 ARHGAP32A7KAX9 2087 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 A0A1B0GW55 424 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 C9orf170A2RU37 121 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 HMX3A6NHT5 357 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 J3QR06 171 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 TIMM23O14925 209 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 SFT2D2O95562 160 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 CDS2O95674 445 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 IGLV1-47P01700 117 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 IGLV2-14P01704 120 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 CRYBA1P05813 215 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 DUX4L2P0CJ85 424 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 DUX4L3P0CJ86 424 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 DUX4L4P0CJ87 422 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 DUX4L5P0CJ88 424 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 DUX4L6P0CJ89 424 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 DUX4L7P0CJ90 424 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 RRASP10301 218 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 MMP9P14780 707 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 PGAM2P15259 253 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 SPNP16150 400 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 F2RP25116 425 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 UCP1P25874 307 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 CEACAM3P40198 252 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 LGALS4P56470 323 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 PIGPP57054 158 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 KRTAP10-3P60369 221 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 RRAS2P62070 204 aaPredicted RBP5.32□□□□□ -1.56
CDCA3-209ENST00000544610 CYCSP99999 105 aaKnown RBP5.32□□□□□ -1.56
CDCA3-209ENST00000544610 HOXA4Q00056 320 aaPredicted RBP5.32□□□□□ -1.56
CDCA3-209ENST00000544610 EIF4EBP1Q13541 118 aaPredicted RBP5.32□□□□□ -1.56
CDCA3-209ENST00000544610 ZNF273Q14593 569 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 MINOS1Q5TGZ0 78 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 RUSC1-AS1Q66K80 236 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 DUX4L9Q6RFH8 374 aaPredicted RBP5.32□□□□□ -1.56
CDCA3-209ENST00000544610 FAM219AQ8IW50 185 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 PRR18Q8N4B5 295 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 TPRX1Q8N7U7 411 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 SSMEM1Q8WWF3 244 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 TMEM56Q96MV1 263 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 S1PR3Q99500 378 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 RNF5Q99942 180 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 CLEC7AQ9BXN2 247 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 FXYD6Q9H0Q3 95 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 TMEM222Q9H0R3 208 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 MMP28Q9H239 520 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 IFI27L2Q9H2X8 130 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 OR51J1Q9H342 316 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 NAA60Q9H7X0 242 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 RAB18Q9NP72 206 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 TNFRSF19Q9NS68 423 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 DUX4Q9UBX2 424 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 PRELID3BQ9Y3B1 194 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 TBL2Q9Y4P3 447 aaKnown RBP5.32□□□□□ -1.56
CDCA3-209ENST00000544610 RBM7Q9Y580 266 aaKnown RBP5.32□□□□□ -1.56
CDCA3-209ENST00000544610 MINOS1-NBL1R4GNA1 71 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 TMEM56-RWDD3S4R434 201 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 RYR3Q15413 4870 aa5.32□□□□□ -1.56
CDCA3-209ENST00000544610 TRAV6A0A075B6T7 132 aa5.31□□□□□ -1.56
CDCA3-209ENST00000544610 IGHV2-26A0A0B4J1V2 119 aa5.31□□□□□ -1.56
CDCA3-209ENST00000544610 A0A0B4J293 547 aa5.31□□□□□ -1.56
CDCA3-209ENST00000544610 IGKV1D-13A0A0B4J2D9 117 aa5.31□□□□□ -1.56
CDCA3-209ENST00000544610 TEX13DA0A0J9YY54 714 aaPredicted RBP5.31□□□□□ -1.56
CDCA3-209ENST00000544610 CENPVL3A0A0U1RRI6 287 aa5.31□□□□□ -1.56
CDCA3-209ENST00000544610 C3orf85A0A1B0GTC6 90 aa5.31□□□□□ -1.56
CDCA3-209ENST00000544610 FAM90A9PA6NNJ1 464 aa5.31□□□□□ -1.56
CDCA3-209ENST00000544610 PGLYRP1O75594 196 aaPredicted RBP5.31□□□□□ -1.56
CDCA3-209ENST00000544610 OR2A4O95047 310 aa5.31□□□□□ -1.56
CDCA3-209ENST00000544610 LY86O95711 162 aa5.31□□□□□ -1.56
CDCA3-209ENST00000544610 HLA-AP01891 365 aaKnown RBP5.31□□□□□ -1.56
CDCA3-209ENST00000544610 OR8U9P0C7N5 309 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms