RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 OR2J1Q9GZK6 312 aa11.48□□□□□ -0.57
VPS33A-208ENST00000543633 C15orf62A8K5M9 175 aa11.47□□□□□ -0.57
VPS33A-208ENST00000543633 SP1P08047 785 aa11.47□□□□□ -0.57
VPS33A-208ENST00000543633 TGFBR3Q03167 851 aa11.47□□□□□ -0.57
VPS33A-208ENST00000543633 SLC10A1Q14973 349 aa11.47□□□□□ -0.57
VPS33A-208ENST00000543633 DCAF10Q5QP82 559 aa11.47□□□□□ -0.57
VPS33A-208ENST00000543633 GATAD1Q8WUU5 269 aa11.47□□□□□ -0.57
VPS33A-208ENST00000543633 TUBG2Q9NRH3 451 aa11.47□□□□□ -0.57
VPS33A-208ENST00000543633 C3orf80F5H4A9 247 aa11.47□□□□□ -0.57
VPS33A-208ENST00000543633 HMGB3O15347 200 aaKnown RBP11.47□□□□□ -0.57
VPS33A-208ENST00000543633 ADH4P08319 380 aa11.47□□□□□ -0.57
VPS33A-208ENST00000543633 SPINK2P20155 84 aa11.47□□□□□ -0.57
VPS33A-208ENST00000543633 IL3RAP26951 378 aa11.47□□□□□ -0.57
VPS33A-208ENST00000543633 OPRK1P41145 380 aa11.47□□□□□ -0.57
VPS33A-208ENST00000543633 PDLIM3Q53GG5 364 aaPredicted RBP11.47□□□□□ -0.57
VPS33A-208ENST00000543633 UNQ6494/PRO21346Q6UXR6 183 aa11.47□□□□□ -0.57
VPS33A-208ENST00000543633 OR52L2PQ8NGH6 319 aa11.47□□□□□ -0.57
VPS33A-208ENST00000543633 OR52E5Q8NH55 327 aa11.47□□□□□ -0.57
VPS33A-208ENST00000543633 SLC25A40Q8TBP6 338 aa11.47□□□□□ -0.57
VPS33A-208ENST00000543633 ZDHHC16Q969W1 377 aa11.47□□□□□ -0.57
VPS33A-208ENST00000543633 WDYHV1Q96HA8 205 aa11.47□□□□□ -0.57
VPS33A-208ENST00000543633 C12orf49Q9H741 205 aa11.47□□□□□ -0.57
VPS33A-208ENST00000543633 CNTRLQ7Z7A1 2325 aa11.46□□□□□ -0.57
VPS33A-208ENST00000543633 C9orf172C9J069 976 aa11.46□□□□□ -0.57
VPS33A-208ENST00000543633 ST8SIA5O15466 376 aa11.46□□□□□ -0.57
VPS33A-208ENST00000543633 NPPCP23582 126 aa11.46□□□□□ -0.57
VPS33A-208ENST00000543633 CD1BP29016 333 aa11.46□□□□□ -0.57
VPS33A-208ENST00000543633 TMPRSS3P57727 454 aa11.46□□□□□ -0.57
VPS33A-208ENST00000543633 UBE2NP61088 152 aaKnown RBP11.46□□□□□ -0.57
VPS33A-208ENST00000543633 HTD2P86397 168 aa11.46□□□□□ -0.57
VPS33A-208ENST00000543633 PMP22Q01453 160 aa11.46□□□□□ -0.57
VPS33A-208ENST00000543633 TCF15Q12870 199 aa11.46□□□□□ -0.57
VPS33A-208ENST00000543633 HNF4GQ14541 408 aa11.46□□□□□ -0.57
VPS33A-208ENST00000543633 INO80CQ6PI98 192 aaPredicted RBP11.46□□□□□ -0.57
VPS33A-208ENST00000543633 ZNF808Q8N4W9 903 aaPredicted RBP11.46□□□□□ -0.57
VPS33A-208ENST00000543633 COQ2Q96H96 371 aa11.46□□□□□ -0.57
VPS33A-208ENST00000543633 GMPPAQ96IJ6 420 aaPredicted RBP11.46□□□□□ -0.57
VPS33A-208ENST00000543633 CXXC4Q9H2H0 198 aa11.46□□□□□ -0.57
VPS33A-208ENST00000543633 PXMP4Q9Y6I8 212 aa11.46□□□□□ -0.57
VPS33A-208ENST00000543633 MARCH11A6NNE9 402 aa11.45□□□□□ -0.58
VPS33A-208ENST00000543633 SPCS3P61009 180 aa11.45□□□□□ -0.58
VPS33A-208ENST00000543633 GNB1P62873 340 aa11.45□□□□□ -0.58
VPS33A-208ENST00000543633 C3AR1Q16581 482 aa11.45□□□□□ -0.58
VPS33A-208ENST00000543633 ACP7Q6ZNF0 438 aa11.45□□□□□ -0.58
VPS33A-208ENST00000543633 TMEM37Q8WXS4 190 aa11.45□□□□□ -0.58
VPS33A-208ENST00000543633 TMEM204Q9BSN7 226 aa11.45□□□□□ -0.58
VPS33A-208ENST00000543633 PTPRBP23467 1997 aa11.45□□□□□ -0.58
VPS33A-208ENST00000543633 OTOGLQ3ZCN5 2332 aa11.45□□□□□ -0.58
VPS33A-208ENST00000543633 A0A1W2PPV4 95 aa11.45□□□□□ -0.58
VPS33A-208ENST00000543633 RBFOX2O43251 390 aaKnown RBP eCLIP11.45□□□□□ -0.58
VPS33A-208ENST00000543633 PSG7Q13046 419 aa11.45□□□□□ -0.58
VPS33A-208ENST00000543633 SSX2Q16385 188 aa11.45□□□□□ -0.58
VPS33A-208ENST00000543633 MRPL52Q86TS9 123 aaKnown RBP11.45□□□□□ -0.58
VPS33A-208ENST00000543633 MRPL41Q8IXM3 137 aaKnown RBP11.45□□□□□ -0.58
VPS33A-208ENST00000543633 MDFIC2A0A1B0GVS7 189 aa11.44□□□□□ -0.58
VPS33A-208ENST00000543633 GRPP07492 148 aa11.44□□□□□ -0.58
VPS33A-208ENST00000543633 CD82P27701 267 aa11.44□□□□□ -0.58
VPS33A-208ENST00000543633 YPEL3P61236 119 aaPredicted RBP11.44□□□□□ -0.58
VPS33A-208ENST00000543633 SMIM21Q3B7S5 101 aa11.44□□□□□ -0.58
VPS33A-208ENST00000543633 FAM78BQ5VT40 261 aa11.44□□□□□ -0.58
VPS33A-208ENST00000543633 MYPOPQ86VE0 399 aaPredicted RBP11.44□□□□□ -0.58
VPS33A-208ENST00000543633 R3HDM4Q96D70 268 aa11.44□□□□□ -0.58
VPS33A-208ENST00000543633 LY96Q9Y6Y9 160 aa11.44□□□□□ -0.58
VPS33A-208ENST00000543633 KIR2DL5BA0A0G2JN68 375 aa11.43□□□□□ -0.58
VPS33A-208ENST00000543633 KIR2DL5BA0A0G2JPC4 375 aa11.43□□□□□ -0.58
VPS33A-208ENST00000543633 SPINT2O43291 252 aa11.43□□□□□ -0.58
VPS33A-208ENST00000543633 RBMXL2O75526 392 aaKnown RBP11.43□□□□□ -0.58
VPS33A-208ENST00000543633 CXorf1O96002 111 aa11.43□□□□□ -0.58
VPS33A-208ENST00000543633 HPRT1P00492 218 aa11.43□□□□□ -0.58
VPS33A-208ENST00000543633 CELA3BP08861 270 aa11.43□□□□□ -0.58
VPS33A-208ENST00000543633 STAG3L2P0CL84 134 aa11.43□□□□□ -0.58
VPS33A-208ENST00000543633 STAG3L3P0CL85 134 aa11.43□□□□□ -0.58
VPS33A-208ENST00000543633 FOSL1P15407 271 aa11.43□□□□□ -0.58
VPS33A-208ENST00000543633 GABRA2P47869 451 aa11.43□□□□□ -0.58
VPS33A-208ENST00000543633 TRIP6Q15654 476 aaKnown RBP11.43□□□□□ -0.58
VPS33A-208ENST00000543633 C11orf53Q8IXP5 236 aa11.43□□□□□ -0.58
VPS33A-208ENST00000543633 KIR2DL5AQ8N109 375 aa11.43□□□□□ -0.58
VPS33A-208ENST00000543633 PRSS33Q8NF86 280 aa11.43□□□□□ -0.58
VPS33A-208ENST00000543633 SFRP2Q96HF1 295 aa11.43□□□□□ -0.58
VPS33A-208ENST00000543633 PARD6AQ9NPB6 346 aa11.43□□□□□ -0.58
VPS33A-208ENST00000543633 PLA2G3Q9NZ20 509 aa11.43□□□□□ -0.58
VPS33A-208ENST00000543633 TRAPPC1Q9Y5R8 145 aa11.43□□□□□ -0.58
VPS33A-208ENST00000543633 TRGV5A0A0B4J1U4 118 aa11.43□□□□□ -0.58
VPS33A-208ENST00000543633 LINC00473A8K010 186 aa11.43□□□□□ -0.58
VPS33A-208ENST00000543633 ZNF705GA8MUZ8 300 aaPredicted RBP11.43□□□□□ -0.58
VPS33A-208ENST00000543633 CD46P15529 392 aa11.43□□□□□ -0.58
VPS33A-208ENST00000543633 CHRNA7P36544 502 aa11.43□□□□□ -0.58
VPS33A-208ENST00000543633 KIR2DS2P43631 304 aa11.43□□□□□ -0.58
VPS33A-208ENST00000543633 CEBPDP49716 269 aaPredicted RBP11.43□□□□□ -0.58
VPS33A-208ENST00000543633 AESQ08117 197 aa11.43□□□□□ -0.58
VPS33A-208ENST00000543633 TMEM164Q5U3C3 297 aa11.43□□□□□ -0.58
VPS33A-208ENST00000543633 LINC00696Q6ZRV3 163 aa11.43□□□□□ -0.58
VPS33A-208ENST00000543633 MRGPRDQ8TDS7 321 aa11.43□□□□□ -0.58
VPS33A-208ENST00000543633 MISP3Q96FF7 219 aa11.43□□□□□ -0.58
VPS33A-208ENST00000543633 ELOVL5Q9NYP7 299 aa11.43□□□□□ -0.58
VPS33A-208ENST00000543633 ARL2-SNX15V9GYD0 113 aa11.43□□□□□ -0.58
VPS33A-208ENST00000543633 TRGV8A0A0C4DH27 118 aa11.42□□□□□ -0.58
VPS33A-208ENST00000543633 A0A0U1RQK1 487 aa11.42□□□□□ -0.58
VPS33A-208ENST00000543633 ZNF320A2RRD8 509 aa11.42□□□□□ -0.58
VPS33A-208ENST00000543633 PRSS46E5RG02 174 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms