RNA–Protein interactions for RNA: ENST00000543393.5

RAP1B-229, Transcript of RAP1B, member of RAS oncogene family, human

TSL 3 BASIC

Gene RAP1B, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-229	ENST00000543393	RIMS4	Q9H426	269 aa	Predicted RBP	13.59	□□□□□ -0.23
RAP1B-229	ENST00000543393	PLEKHJ1	Q9NW61	149 aa		13.59	□□□□□ -0.23
RAP1B-229	ENST00000543393	PNMA8C	A0A1B0GUJ8	204 aa		13.58	□□□□□ -0.24
RAP1B-229	ENST00000543393	LOC100130705	A0A1B0GUX0	176 aa		13.58	□□□□□ -0.24
RAP1B-229	ENST00000543393	UBB	P0CG47	229 aa		13.58	□□□□□ -0.24
RAP1B-229	ENST00000543393	APOC4	P55056	127 aa		13.58	□□□□□ -0.24
RAP1B-229	ENST00000543393	C15orf32	Q32M92	178 aa		13.58	□□□□□ -0.24
RAP1B-229	ENST00000543393	TMEM177	Q53S58	311 aa		13.58	□□□□□ -0.24
RAP1B-229	ENST00000543393	TMEM217	Q8N7C4	229 aa		13.58	□□□□□ -0.24
RAP1B-229	ENST00000543393	NECAP1	Q8NC96	275 aa		13.58	□□□□□ -0.24
RAP1B-229	ENST00000543393	PYDC1	Q8WXC3	89 aa		13.58	□□□□□ -0.24
RAP1B-229	ENST00000543393	TM2D1	Q9BX74	207 aa		13.58	□□□□□ -0.24
RAP1B-229	ENST00000543393	RDH8	Q9NYR8	311 aa		13.58	□□□□□ -0.24
RAP1B-229	ENST00000543393	AK3	Q9UIJ7	227 aa		13.58	□□□□□ -0.24
RAP1B-229	ENST00000543393	EXOSC1	Q9Y3B2	195 aa	Known RBP	13.58	□□□□□ -0.24
RAP1B-229	ENST00000543393	DNAH6	Q9C0G6	4158 aa		13.57	□□□□□ -0.24
RAP1B-229	ENST00000543393	IGKV1-6	A0A0C4DH72	117 aa		13.57	□□□□□ -0.24
RAP1B-229	ENST00000543393	TMEM213	A2RRL7	107 aa		13.57	□□□□□ -0.24
RAP1B-229	ENST00000543393	OR2J3	O76001	311 aa		13.57	□□□□□ -0.24
RAP1B-229	ENST00000543393	MYL12A	P19105	171 aa		13.57	□□□□□ -0.24
RAP1B-229	ENST00000543393	CBX3	Q13185	183 aa		13.57	□□□□□ -0.24
RAP1B-229	ENST00000543393	PRSS8	Q16651	343 aa		13.57	□□□□□ -0.24
RAP1B-229	ENST00000543393	FAM209B	Q5JX69	171 aa		13.57	□□□□□ -0.24
RAP1B-229	ENST00000543393	IDO2	Q6ZQW0	420 aa		13.57	□□□□□ -0.24
RAP1B-229	ENST00000543393	GPHB5	Q86YW7	130 aa		13.57	□□□□□ -0.24
RAP1B-229	ENST00000543393	UXS1	Q8NBZ7	420 aa		13.57	□□□□□ -0.24
RAP1B-229	ENST00000543393	ACOT12	Q8WYK0	555 aa		13.57	□□□□□ -0.24
RAP1B-229	ENST00000543393	KCNK15	Q9H427	330 aa		13.57	□□□□□ -0.24
RAP1B-229	ENST00000543393		Q9N2K0	584 aa		13.57	□□□□□ -0.24
RAP1B-229	ENST00000543393	MGAT4A	Q9UM21	535 aa		13.57	□□□□□ -0.24
RAP1B-229	ENST00000543393		A0A0A6YYD4	124 aa		13.56	□□□□□ -0.24
RAP1B-229	ENST00000543393	WBP4	O75554	376 aa	Known RBP	13.56	□□□□□ -0.24
RAP1B-229	ENST00000543393	UNC119	Q13432	240 aa		13.56	□□□□□ -0.24
RAP1B-229	ENST00000543393	VMA21	Q3ZAQ7	101 aa		13.56	□□□□□ -0.24
RAP1B-229	ENST00000543393	TTC9C	Q8N5M4	171 aa		13.56	□□□□□ -0.24
RAP1B-229	ENST00000543393	TEX45	Q8NA69	505 aa		13.56	□□□□□ -0.24
RAP1B-229	ENST00000543393	ZNF485	Q8NCK3	441 aa		13.56	□□□□□ -0.24
RAP1B-229	ENST00000543393	RNF183	Q96D59	192 aa		13.56	□□□□□ -0.24
RAP1B-229	ENST00000543393	OR2D2	Q9H210	308 aa		13.56	□□□□□ -0.24
RAP1B-229	ENST00000543393	SDHAF2	Q9NX18	166 aa		13.56	□□□□□ -0.24
RAP1B-229	ENST00000543393	DIMT1	Q9UNQ2	313 aa	Known RBP	13.56	□□□□□ -0.24
RAP1B-229	ENST00000543393	ZNF320	A2RRD8	509 aa		13.55	□□□□□ -0.24
RAP1B-229	ENST00000543393	UBE2C	O00762	179 aa		13.55	□□□□□ -0.24
RAP1B-229	ENST00000543393	UBE2K	P61086	200 aa		13.55	□□□□□ -0.24
RAP1B-229	ENST00000543393	RTL8B	Q17RB0	113 aa		13.55	□□□□□ -0.24
RAP1B-229	ENST00000543393	BTNL8	Q6UX41	500 aa		13.55	□□□□□ -0.24
RAP1B-229	ENST00000543393	C5orf30	Q96GV9	206 aa		13.55	□□□□□ -0.24
RAP1B-229	ENST00000543393	MUC4	Q99102	2169 aa		13.55	□□□□□ -0.24
RAP1B-229	ENST00000543393	PKHD1	P08F94	4074 aa		13.54	□□□□□ -0.24
RAP1B-229	ENST00000543393		A8MWP6	167 aa		13.54	□□□□□ -0.24
RAP1B-229	ENST00000543393	IGHV3-23	P01764	117 aa		13.54	□□□□□ -0.24
RAP1B-229	ENST00000543393	ARL3	P36405	182 aa		13.54	□□□□□ -0.24
RAP1B-229	ENST00000543393	MAP2K4	P45985	399 aa		13.54	□□□□□ -0.24
RAP1B-229	ENST00000543393	TAGLN	Q01995	201 aa	Known RBP	13.54	□□□□□ -0.24
RAP1B-229	ENST00000543393	OR1L6	Q8NGR2	347 aa		13.54	□□□□□ -0.24
RAP1B-229	ENST00000543393	GGH	Q92820	318 aa		13.54	□□□□□ -0.24
RAP1B-229	ENST00000543393	SPIN2A	Q99865	258 aa		13.54	□□□□□ -0.24
RAP1B-229	ENST00000543393	SPIN2B	Q9BPZ2	258 aa		13.54	□□□□□ -0.24
RAP1B-229	ENST00000543393	IRGM	A1A4Y4	181 aa		13.53	□□□□□ -0.24
RAP1B-229	ENST00000543393	TMEM14DP	A8MWL7	114 aa		13.53	□□□□□ -0.24
RAP1B-229	ENST00000543393	SOCS1	O15524	211 aa		13.53	□□□□□ -0.24
RAP1B-229	ENST00000543393	RRAS	P10301	218 aa		13.53	□□□□□ -0.24
RAP1B-229	ENST00000543393	SRM	P19623	302 aa		13.53	□□□□□ -0.24
RAP1B-229	ENST00000543393	FAM106A	Q4KMX7	169 aa		13.53	□□□□□ -0.24
RAP1B-229	ENST00000543393	C1orf100	Q5SVJ3	147 aa		13.53	□□□□□ -0.24
RAP1B-229	ENST00000543393	C10orf55	Q5SWW7	151 aa		13.53	□□□□□ -0.24
RAP1B-229	ENST00000543393	GLT8D1	Q68CQ7	371 aa		13.53	□□□□□ -0.24
RAP1B-229	ENST00000543393	CLEC19A	Q6UXS0	136 aa		13.53	□□□□□ -0.24
RAP1B-229	ENST00000543393	STPG3	Q8N7X2	389 aa		13.53	□□□□□ -0.24
RAP1B-229	ENST00000543393	CCDC140	Q96MF4	163 aa		13.53	□□□□□ -0.24
RAP1B-229	ENST00000543393	C12orf4	Q9NQ89	552 aa		13.53	□□□□□ -0.24
RAP1B-229	ENST00000543393	UBQLN2	Q9UHD9	624 aa		13.53	□□□□□ -0.24
RAP1B-229	ENST00000543393	FBXL7	Q9UJT9	491 aa		13.53	□□□□□ -0.24
RAP1B-229	ENST00000543393		S4R3C0	116 aa		13.53	□□□□□ -0.24
RAP1B-229	ENST00000543393	TRAV25	A0A0B4J276	109 aa		13.52	□□□□□ -0.25
RAP1B-229	ENST00000543393	ACTL6B	O94805	426 aa		13.52	□□□□□ -0.25
RAP1B-229	ENST00000543393	CRYZL1	O95825	349 aa		13.52	□□□□□ -0.25
RAP1B-229	ENST00000543393	CD3G	P09693	182 aa		13.52	□□□□□ -0.25
RAP1B-229	ENST00000543393	MAPK3	P27361	379 aa	Predicted RBP	13.52	□□□□□ -0.25
RAP1B-229	ENST00000543393	TAS2R43	P59537	309 aa		13.52	□□□□□ -0.25
RAP1B-229	ENST00000543393	QRFP	P83859	136 aa		13.52	□□□□□ -0.25
RAP1B-229	ENST00000543393	OR4A47	Q6IF82	309 aa		13.52	□□□□□ -0.25
RAP1B-229	ENST00000543393	RBPMS2	Q6ZRY4	209 aa	Known RBP	13.52	□□□□□ -0.25
RAP1B-229	ENST00000543393	C19orf35	Q6ZS72	473 aa		13.52	□□□□□ -0.25
RAP1B-229	ENST00000543393	ZNF430	Q9H8G1	570 aa	Predicted RBP	13.52	□□□□□ -0.25
RAP1B-229	ENST00000543393	KIR2DL5B	A0A0G2JN68	375 aa		13.51	□□□□□ -0.25
RAP1B-229	ENST00000543393	KIR2DL5B	A0A0G2JPC4	375 aa		13.51	□□□□□ -0.25
RAP1B-229	ENST00000543393	TRDC	B7Z8K6	153 aa		13.51	□□□□□ -0.25
RAP1B-229	ENST00000543393	CEL	P19835	753 aa		13.51	□□□□□ -0.25
RAP1B-229	ENST00000543393	SERPINB10	P48595	397 aa		13.51	□□□□□ -0.25
RAP1B-229	ENST00000543393	MED21	Q13503	144 aa		13.51	□□□□□ -0.25
RAP1B-229	ENST00000543393	INSL4	Q14641	139 aa		13.51	□□□□□ -0.25
RAP1B-229	ENST00000543393	CEACAM19	Q7Z692	300 aa		13.51	□□□□□ -0.25
RAP1B-229	ENST00000543393	SLC25A42	Q86VD7	318 aa		13.51	□□□□□ -0.25
RAP1B-229	ENST00000543393	KIR2DL5A	Q8N109	375 aa		13.51	□□□□□ -0.25
RAP1B-229	ENST00000543393	OR2C3	Q8N628	320 aa		13.51	□□□□□ -0.25
RAP1B-229	ENST00000543393	KIR2DL5B	Q8NHK3	375 aa		13.51	□□□□□ -0.25
RAP1B-229	ENST00000543393	FBLIM1	Q8WUP2	373 aa		13.51	□□□□□ -0.25
RAP1B-229	ENST00000543393	TMEM80	Q96HE8	168 aa		13.51	□□□□□ -0.25
RAP1B-229	ENST00000543393	LPAR5	Q9H1C0	372 aa		13.51	□□□□□ -0.25

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