RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 KBTBD11O94819 623 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 S1PR2O95136 353 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 TNFSF15O95150 251 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 PTBP3O95758 552 aaKnown RBP4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 IGKV3-15P01624 115 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 GRPP07492 148 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 CD55P08174 381 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 COX5AP20674 150 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 KITLGP21583 273 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 S100A2P29034 98 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 G6PCP35575 357 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 CEBPDP49716 269 aaPredicted RBP4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 IDH3GP51553 393 aaPredicted RBP4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 ELLP55199 621 aaPredicted RBP4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 UBE2NP61088 152 aaKnown RBP4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 GNB2P62879 340 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 CATR1Q13166 79 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 TMEM241Q24JQ0 296 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 TMEM249Q2WGJ8 235 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 COA6Q5JTJ3 125 aaKnown RBP4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 FAM209BQ5JX69 171 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 ZNF66Q6ZN08 573 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 ACP7Q6ZNF0 438 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 Q6ZR03 302 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 Q6ZT83 130 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 BEND4Q6ZU67 534 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 VASH2Q86V25 355 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 TGIF2LYQ8IUE0 185 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 Q8N7P7 452 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 WDR31Q8NA23 367 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 OR52L2PQ8NGH6 319 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 FAM216AQ8WUB2 273 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 LURAP1Q96LR2 239 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 CIB3Q96Q77 187 aaPredicted RBP4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 TAAR6Q96RI8 345 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 DIRC2Q96SL1 478 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 OR2D2Q9H210 308 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 CXXC4Q9H2H0 198 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 SRD5A3Q9H8P0 318 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 MANBALQ9NQG1 85 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 SLC39A9Q9NUM3 307 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 CLN8Q9UBY8 286 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 CNOT1A5YKK6 2376 aaKnown RBP4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 MED13Q9UHV7 2174 aa4.33□□□□□ -1.72
ATPAF1-212ENST00000542495 FAM90A9PA6NNJ1 464 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 C15orf65H3BRN8 121 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 WNT9BO14905 357 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 PPP1R2P9O14990 202 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 GATCO43716 136 aaKnown RBP4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 ZG16O60844 167 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 LY86O95711 162 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 KRASP01116 189 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 HIST1H1BP16401 226 aaKnown RBP4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 IL2RGP31785 369 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 TNFSF10P50591 281 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 RPL23P62829 140 aaKnown RBP4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 RPL11P62913 178 aaKnown RBP4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 NKX6-1P78426 367 aaPredicted RBP4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 HTD2P86397 168 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 AESQ08117 197 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 CR1LQ2VPA4 569 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 PDLIM3Q53GG5 364 aaPredicted RBP4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 OR2B11Q5JQS5 317 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 GFI1BQ5VTD9 330 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 NCR3LG1Q68D85 454 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 OR8G2PQ6IF36 304 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 FAM53AQ6NSI3 398 aaPredicted RBP4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 TRAT1Q6PIZ9 186 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 WDR82Q6UXN9 313 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 ZNF826PQ6ZT77 177 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 Q8N1Y9 231 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 TMEM178AQ8NBL3 297 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 DTD1Q8TEA8 209 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 HSD17B10Q99714 261 aaKnown RBP4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 SMIM7Q9BQ49 75 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 NPCDR1Q9BY65 106 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 GPR61Q9BZJ8 451 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 BCL2L14Q9BZR8 327 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 ACTR3CQ9C0K3 210 aaPredicted RBP4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 PRDM13Q9H4Q3 707 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 ZMAT5Q9UDW3 170 aaKnown RBP4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 LAMP3Q9UQV4 416 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 DNAJC13O75165 2243 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 ZFHX4Q86UP3 3567 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 PTPRBP23467 1997 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 SMCO3A2RU48 225 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 TMEM8BA6NDV4 472 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 OR5H1A6NKK0 313 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 LINC00473A8K010 186 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 C15orf62A8K5M9 175 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 SOX15O60248 233 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 PROP1O75360 226 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 LYZL6O75951 148 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 VENTXO95231 258 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 IGLV1-44P01699 117 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 ADH4P08319 380 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 FGF7P21781 194 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 KIR2DL2P43627 348 aaPredicted RBP4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 PSMB3P49720 205 aa4.32□□□□□ -1.72
ATPAF1-212ENST00000542495 ARG2P78540 354 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms