RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 RASL10BQ96S79 203 aa12.16□□□□□ -0.46
TRPM1-203ENST00000542188 PPP1R3EQ9H7J1 279 aa12.16□□□□□ -0.46
TRPM1-203ENST00000542188 HILPDAQ9Y5L2 63 aa12.16□□□□□ -0.46
TRPM1-203ENST00000542188 C16orf97H3BN30 126 aa12.16□□□□□ -0.46
TRPM1-203ENST00000542188 CITO14578 2027 aa12.16□□□□□ -0.46
TRPM1-203ENST00000542188 SIGLEC14Q08ET2 396 aa12.16□□□□□ -0.46
TRPM1-203ENST00000542188 PRSS41Q7RTY9 318 aa12.16□□□□□ -0.46
TRPM1-203ENST00000542188 ERVH48-1M5A8F1 160 aa12.16□□□□□ -0.46
TRPM1-203ENST00000542188 CXorf66Q5JRM2 361 aaPredicted RBP12.16□□□□□ -0.46
TRPM1-203ENST00000542188 LINC01555Q8NAE3 123 aa12.16□□□□□ -0.46
TRPM1-203ENST00000542188 ST6GALNAC3Q8NDV1 305 aa12.16□□□□□ -0.46
TRPM1-203ENST00000542188 ZP4Q12836 540 aa12.16□□□□□ -0.46
TRPM1-203ENST00000542188 ATXN8Q156A1 80 aa12.16□□□□□ -0.46
TRPM1-203ENST00000542188 TMEM249Q2WGJ8 235 aa12.16□□□□□ -0.46
TRPM1-203ENST00000542188 NHLRC3Q5JS37 347 aa12.16□□□□□ -0.46
TRPM1-203ENST00000542188 LRTM2Q8N967 370 aa12.16□□□□□ -0.46
TRPM1-203ENST00000542188 NABP2Q9BQ15 211 aa12.16□□□□□ -0.46
TRPM1-203ENST00000542188 SERGEFQ9UGK8 458 aa12.16□□□□□ -0.46
TRPM1-203ENST00000542188 NDUFA3O95167 84 aa12.15□□□□□ -0.46
TRPM1-203ENST00000542188 RIPPLY3P57055 190 aa12.15□□□□□ -0.46
TRPM1-203ENST00000542188 FMC1Q96HJ9 113 aa12.15□□□□□ -0.46
TRPM1-203ENST00000542188 ZNF729A6NN14 1252 aaPredicted RBP12.15□□□□□ -0.46
TRPM1-203ENST00000542188 TBR1Q16650 682 aa12.15□□□□□ -0.46
TRPM1-203ENST00000542188 SLC25A53Q5H9E4 307 aa12.15□□□□□ -0.46
TRPM1-203ENST00000542188 LINC01465Q8N7H1 131 aa12.15□□□□□ -0.46
TRPM1-203ENST00000542188 MGST2Q99735 147 aa12.15□□□□□ -0.46
TRPM1-203ENST00000542188 SH3BGRL3Q9H299 93 aa12.15□□□□□ -0.46
TRPM1-203ENST00000542188 OR2H2O95918 312 aa12.15□□□□□ -0.46
TRPM1-203ENST00000542188 MPV17P39210 176 aa12.15□□□□□ -0.46
TRPM1-203ENST00000542188 UNC119Q13432 240 aa12.15□□□□□ -0.46
TRPM1-203ENST00000542188 MYEOVQ96EZ4 313 aa12.15□□□□□ -0.46
TRPM1-203ENST00000542188 FOXI3A8MTJ6 420 aaPredicted RBP12.15□□□□□ -0.46
TRPM1-203ENST00000542188 SNAI2O43623 268 aa12.15□□□□□ -0.46
TRPM1-203ENST00000542188 TDGF1P13385 188 aa12.15□□□□□ -0.46
TRPM1-203ENST00000542188 GPX4P36969 197 aaPredicted RBP12.15□□□□□ -0.46
TRPM1-203ENST00000542188 GAGE2BQ13066 116 aa12.15□□□□□ -0.46
TRPM1-203ENST00000542188 GAGE2EQ4V326 116 aa12.15□□□□□ -0.46
TRPM1-203ENST00000542188 ST6GALNAC6Q969X2 333 aa12.15□□□□□ -0.46
TRPM1-203ENST00000542188 ZNF488Q96MN9 340 aa12.15□□□□□ -0.46
TRPM1-203ENST00000542188 PRDM13Q9H4Q3 707 aa12.15□□□□□ -0.46
TRPM1-203ENST00000542188 GAGE2DQ9UEU5 116 aa12.15□□□□□ -0.46
TRPM1-203ENST00000542188 THY1P04216 161 aa12.14□□□□□ -0.47
TRPM1-203ENST00000542188 HOXB1P14653 301 aaPredicted RBP12.14□□□□□ -0.47
TRPM1-203ENST00000542188 CLDND2Q8NHS1 167 aa12.14□□□□□ -0.47
TRPM1-203ENST00000542188 CCL13Q99616 98 aa12.14□□□□□ -0.47
TRPM1-203ENST00000542188 SSBP3Q9BWW4 388 aaPredicted RBP12.14□□□□□ -0.47
TRPM1-203ENST00000542188 TRAV12-3A0A0B4J271 114 aa12.14□□□□□ -0.47
TRPM1-203ENST00000542188 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.14□□□□□ -0.47
TRPM1-203ENST00000542188 FNDC4Q9H6D8 234 aaPredicted RBP12.14□□□□□ -0.47
TRPM1-203ENST00000542188 LHX9Q9NQ69 397 aa12.14□□□□□ -0.47
TRPM1-203ENST00000542188 CARHSP1Q9Y2V2 147 aaKnown RBP12.14□□□□□ -0.47
TRPM1-203ENST00000542188 RGPD1P0DJD0 1748 aa12.14□□□□□ -0.47
TRPM1-203ENST00000542188 PEX7O00628 323 aa12.14□□□□□ -0.47
TRPM1-203ENST00000542188 GATAD1Q8WUU5 269 aa12.14□□□□□ -0.47
TRPM1-203ENST00000542188 AQP3Q92482 292 aa12.14□□□□□ -0.47
TRPM1-203ENST00000542188 G6PC2Q9NQR9 355 aa12.14□□□□□ -0.47
TRPM1-203ENST00000542188 TMEM74BQ9NUR3 256 aa12.14□□□□□ -0.47
TRPM1-203ENST00000542188 GGTLC3B5MD39 225 aa12.14□□□□□ -0.47
TRPM1-203ENST00000542188 PGFP49763 221 aa12.14□□□□□ -0.47
TRPM1-203ENST00000542188 C1QL3Q5VWW1 255 aa12.14□□□□□ -0.47
TRPM1-203ENST00000542188 CALYQ9NYX4 217 aa12.14□□□□□ -0.47
TRPM1-203ENST00000542188 SCTP09683 121 aa12.14□□□□□ -0.47
TRPM1-203ENST00000542188 NUTF2P61970 127 aaKnown RBP12.14□□□□□ -0.47
TRPM1-203ENST00000542188 A0A087WWC5 75 aa12.13□□□□□ -0.47
TRPM1-203ENST00000542188 NPIPB4C9JG80 1138 aa12.13□□□□□ -0.47
TRPM1-203ENST00000542188 NDUFA2O43678 99 aa12.13□□□□□ -0.47
TRPM1-203ENST00000542188 LAMA4Q16363 1823 aa12.13□□□□□ -0.47
TRPM1-203ENST00000542188 LAMB4A4D0S4 1761 aa12.13□□□□□ -0.47
TRPM1-203ENST00000542188 C3AR1Q16581 482 aa12.13□□□□□ -0.47
TRPM1-203ENST00000542188 WNT2BQ93097 391 aa12.13□□□□□ -0.47
TRPM1-203ENST00000542188 JPT1Q9UK76 154 aa12.13□□□□□ -0.47
TRPM1-203ENST00000542188 A0A1B0GUT8 65 aa12.13□□□□□ -0.47
TRPM1-203ENST00000542188 CTGFP29279 349 aa12.13□□□□□ -0.47
TRPM1-203ENST00000542188 OR4D11Q8NGI4 311 aa12.13□□□□□ -0.47
TRPM1-203ENST00000542188 RPP21Q9H633 154 aaKnown RBP12.13□□□□□ -0.47
TRPM1-203ENST00000542188 TOMM7Q9P0U1 55 aa12.13□□□□□ -0.47
TRPM1-203ENST00000542188 TRAV24A0A0B4J272 114 aa12.13□□□□□ -0.47
TRPM1-203ENST00000542188 IZUMO1RA6ND01 250 aa12.13□□□□□ -0.47
TRPM1-203ENST00000542188 ZG16O60844 167 aa12.13□□□□□ -0.47
TRPM1-203ENST00000542188 C16orf47Q6ZP98 133 aaPredicted RBP12.13□□□□□ -0.47
TRPM1-203ENST00000542188 VN1R4Q7Z5H5 301 aa12.13□□□□□ -0.47
TRPM1-203ENST00000542188 C21orf140B9A014 251 aa12.13□□□□□ -0.47
TRPM1-203ENST00000542188 LIFP15018 202 aa12.13□□□□□ -0.47
TRPM1-203ENST00000542188 CTSSP25774 331 aa12.13□□□□□ -0.47
TRPM1-203ENST00000542188 CLEC2AQ6UVW9 174 aa12.13□□□□□ -0.47
TRPM1-203ENST00000542188 CYP2G1PQ6ZSU1 146 aa12.13□□□□□ -0.47
TRPM1-203ENST00000542188 TMEM229AB2RXF0 380 aa12.12□□□□□ -0.47
TRPM1-203ENST00000542188 C2CD4DB7Z1M9 353 aa12.12□□□□□ -0.47
TRPM1-203ENST00000542188 NPIPB11E5RHQ5 1161 aa12.12□□□□□ -0.47
TRPM1-203ENST00000542188 FOXA3P55318 350 aaPredicted RBP12.12□□□□□ -0.47
TRPM1-203ENST00000542188 DNM1P46Q6ZS02 220 aa12.12□□□□□ -0.47
TRPM1-203ENST00000542188 TDHQ8IZJ6 230 aa12.12□□□□□ -0.47
TRPM1-203ENST00000542188 RNF182Q8N6D2 247 aa12.12□□□□□ -0.47
TRPM1-203ENST00000542188 WDR54Q9H977 334 aa12.12□□□□□ -0.47
TRPM1-203ENST00000542188 NHP2Q9NX24 153 aaKnown RBP12.12□□□□□ -0.47
TRPM1-203ENST00000542188 TRBV5-5A0A0J9YX44 114 aa12.12□□□□□ -0.47
TRPM1-203ENST00000542188 C9JCJ5 164 aa12.12□□□□□ -0.47
TRPM1-203ENST00000542188 PAX1P15863 534 aa12.12□□□□□ -0.47
TRPM1-203ENST00000542188 SSBP2P81877 361 aaPredicted RBP12.12□□□□□ -0.47
TRPM1-203ENST00000542188 SNAI3Q3KNW1 292 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms